RNA–Protein interactions for RNA: ENST00000639128.1

RTTN-214, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 4,547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-214ENST00000639128 ZRSR1Q15695 479 aaKnown RBP7.08□□□□□ -1.28
RTTN-214ENST00000639128 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.08□□□□□ -1.28
RTTN-214ENST00000639128 KCNA4P22459 653 aa7.07□□□□□ -1.28
RTTN-214ENST00000639128 DEKP35659 375 aaKnown RBP7.07□□□□□ -1.28
RTTN-214ENST00000639128 FKBP8Q14318 412 aa7.07□□□□□ -1.28
RTTN-214ENST00000639128 CCDC180Q9P1Z9 1646 aa7.06□□□□□ -1.28
RTTN-214ENST00000639128 MTERF4Q7Z6M4 381 aaKnown RBP7.06□□□□□ -1.28
RTTN-214ENST00000639128 MAP7D2Q96T17 732 aa7.06□□□□□ -1.28
RTTN-214ENST00000639128 NOM1Q5C9Z4 860 aaKnown RBP7.06□□□□□ -1.28
RTTN-214ENST00000639128 TAF3Q5VWG9 929 aa7.05□□□□□ -1.28
RTTN-214ENST00000639128 CCDC136Q96JN2 1154 aa7.05□□□□□ -1.28
RTTN-214ENST00000639128 GOLGA6L4A6NEF3 574 aa7.04□□□□□ -1.28
RTTN-214ENST00000639128 PDE4CQ08493 712 aa7.04□□□□□ -1.28
RTTN-214ENST00000639128 SLC4A1APQ9BWU0 796 aaKnown RBP7.04□□□□□ -1.28
RTTN-214ENST00000639128 RTN4Q9NQC3 1192 aaKnown RBP7.04□□□□□ -1.28
RTTN-214ENST00000639128 TRIM41Q8WV44 630 aa7.03□□□□□ -1.28
RTTN-214ENST00000639128 NOP58Q9Y2X3 529 aaKnown RBP7.03□□□□□ -1.28
RTTN-214ENST00000639128 KIAA2012Q0VF49 1180 aa7.02□□□□□ -1.28
RTTN-214ENST00000639128 ARXQ96QS3 562 aa7.02□□□□□ -1.29
RTTN-214ENST00000639128 CCDC66A2RUB6 948 aa7.01□□□□□ -1.29
RTTN-214ENST00000639128 MEX3CQ5U5Q3 659 aaKnown RBP7□□□□□ -1.29
RTTN-214ENST00000639128 UBTFP17480 764 aaKnown RBP7□□□□□ -1.29
RTTN-214ENST00000639128 GPS2Q13227 327 aa6.99□□□□□ -1.29
RTTN-214ENST00000639128 HTATSF1O43719 755 aaKnown RBP6.99□□□□□ -1.29
RTTN-214ENST00000639128 HMGB1P1B2RPK0 211 aaPredicted RBP6.98□□□□□ -1.29
RTTN-214ENST00000639128 HSP90B1P14625 803 aaKnown RBP6.97□□□□□ -1.29
RTTN-214ENST00000639128 TEX35Q5T0J7 233 aa6.97□□□□□ -1.29
RTTN-214ENST00000639128 HAP1P54257 671 aaPredicted RBP6.97□□□□□ -1.29
RTTN-214ENST00000639128 HMMRO75330 724 aa6.97□□□□□ -1.29
RTTN-214ENST00000639128 PATL2C9JE40 543 aaKnown RBP6.96□□□□□ -1.29
RTTN-214ENST00000639128 NOC3LQ8WTT2 800 aaKnown RBP6.96□□□□□ -1.29
RTTN-214ENST00000639128 TSPYL1Q9H0U9 437 aa6.96□□□□□ -1.3
RTTN-214ENST00000639128 CCDC9Q9Y3X0 531 aaKnown RBP6.96□□□□□ -1.3
RTTN-214ENST00000639128 CWC15Q9P013 229 aaKnown RBP6.95□□□□□ -1.3
RTTN-214ENST00000639128 ZNF771Q7L3S4 317 aaPredicted RBP6.95□□□□□ -1.3
RTTN-214ENST00000639128 RRP12Q5JTH9 1297 aaKnown RBP6.95□□□□□ -1.3
RTTN-214ENST00000639128 SSR1P43307 286 aaKnown RBP6.94□□□□□ -1.3
RTTN-214ENST00000639128 USP8P40818 1118 aa6.94□□□□□ -1.3
RTTN-214ENST00000639128 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.94□□□□□ -1.3
RTTN-214ENST00000639128 TAF7LQ5H9L4 462 aa6.93□□□□□ -1.3
RTTN-214ENST00000639128 CCDC191Q8NCU4 936 aa6.93□□□□□ -1.3
RTTN-214ENST00000639128 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.92□□□□□ -1.3
RTTN-214ENST00000639128 RDXP35241 583 aaKnown RBP6.92□□□□□ -1.3
RTTN-214ENST00000639128 CFAP44Q96MT7 982 aa6.91□□□□□ -1.3
RTTN-214ENST00000639128 CHMP3Q9Y3E7 222 aa6.9□□□□□ -1.3
RTTN-214ENST00000639128 TULP1O00294 542 aaPredicted RBP6.89□□□□□ -1.31
RTTN-214ENST00000639128 PDIA4P13667 645 aaKnown RBP6.89□□□□□ -1.31
RTTN-214ENST00000639128 NCBP3Q53F19 620 aaKnown RBP6.89□□□□□ -1.31
RTTN-214ENST00000639128 ZNF526Q8TF50 670 aaPredicted RBP6.89□□□□□ -1.31
RTTN-214ENST00000639128 CSPP1Q1MSJ5 1256 aa6.89□□□□□ -1.31
RTTN-214ENST00000639128 MYH16Q9H6N6 1097 aa6.89□□□□□ -1.31
RTTN-214ENST00000639128 SYAP1Q96A49 352 aaPredicted RBP6.89□□□□□ -1.31
RTTN-214ENST00000639128 CC2D1BQ5T0F9 858 aaKnown RBP6.88□□□□□ -1.31
RTTN-214ENST00000639128 NEXNQ0ZGT2 675 aa6.88□□□□□ -1.31
RTTN-214ENST00000639128 PAIP2Q9BPZ3 127 aaKnown RBP6.88□□□□□ -1.31
RTTN-214ENST00000639128 CASC1Q6TDU7 716 aa6.88□□□□□ -1.31
RTTN-214ENST00000639128 CDR1P51861 262 aa6.87□□□□□ -1.31
RTTN-214ENST00000639128 PES1O00541 588 aaKnown RBP6.87□□□□□ -1.31
RTTN-214ENST00000639128 SETSIPP0DME0 302 aa6.87□□□□□ -1.31
RTTN-214ENST00000639128 GBP4Q96PP9 640 aa6.87□□□□□ -1.31
RTTN-214ENST00000639128 CALD1Q05682 793 aaKnown RBP6.87□□□□□ -1.31
RTTN-214ENST00000639128 ACBD3Q9H3P7 528 aa6.87□□□□□ -1.31
RTTN-214ENST00000639128 HNRNPUQ00839 825 aaKnown RBP eCLIP6.86□□□□□ -1.31
RTTN-214ENST00000639128 DEF6Q9H4E7 631 aa6.86□□□□□ -1.31
RTTN-214ENST00000639128 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.86□□□□□ -1.31
RTTN-214ENST00000639128 INCENPQ9NQS7 918 aa6.86□□□□□ -1.31
RTTN-214ENST00000639128 TPM2P07951 284 aa6.86□□□□□ -1.31
RTTN-214ENST00000639128 WDR43Q15061 677 aaKnown RBP eCLIP6.86□□□□□ -1.31
RTTN-214ENST00000639128 LMOD2Q6P5Q4 547 aa6.86□□□□□ -1.31
RTTN-214ENST00000639128 PHF14O94880 888 aa6.86□□□□□ -1.31
RTTN-214ENST00000639128 PLCB2Q00722 1185 aa6.86□□□□□ -1.31
RTTN-214ENST00000639128 DYDC1Q8WWB3 177 aa6.86□□□□□ -1.31
RTTN-214ENST00000639128 CSRNP3Q8WYN3 585 aa6.86□□□□□ -1.31
RTTN-214ENST00000639128 DCTN1Q14203 1278 aa6.85□□□□□ -1.31
RTTN-214ENST00000639128 HNRNPUL2Q1KMD3 747 aaKnown RBP6.85□□□□□ -1.31
RTTN-214ENST00000639128 UBE2Q2Q8WVN8 375 aa6.85□□□□□ -1.31
RTTN-214ENST00000639128 RRP9O43818 475 aaKnown RBP6.85□□□□□ -1.31
RTTN-214ENST00000639128 DRC7Q8IY82 874 aa6.84□□□□□ -1.31
RTTN-214ENST00000639128 CHMP4BQ9H444 224 aaKnown RBP6.84□□□□□ -1.31
RTTN-214ENST00000639128 PPP4R2Q9NY27 417 aa6.84□□□□□ -1.31
RTTN-214ENST00000639128 PSMD1Q99460 953 aa6.84□□□□□ -1.32
RTTN-214ENST00000639128 ZRSR2Q15696 482 aaKnown RBP6.83□□□□□ -1.32
RTTN-214ENST00000639128 CCDC70Q6NSX1 233 aa6.83□□□□□ -1.32
RTTN-214ENST00000639128 TPM4P67936 248 aa6.83□□□□□ -1.32
RTTN-214ENST00000639128 AXDND1Q5T1B0 1012 aaPredicted RBP6.82□□□□□ -1.32
RTTN-214ENST00000639128 RBM28Q9NW13 759 aaKnown RBP6.82□□□□□ -1.32
RTTN-214ENST00000639128 HMGN5P82970 282 aaKnown RBP6.82□□□□□ -1.32
RTTN-214ENST00000639128 ARGLU1Q9NWB6 273 aaPredicted RBP6.82□□□□□ -1.32
RTTN-214ENST00000639128 BRD2P25440 801 aaKnown RBP6.82□□□□□ -1.32
RTTN-214ENST00000639128 TMX4Q9H1E5 349 aaPredicted RBP6.82□□□□□ -1.32
RTTN-214ENST00000639128 HSCBQ8IWL3 235 aa6.81□□□□□ -1.32
RTTN-214ENST00000639128 CAGE1Q8TC20 777 aa6.81□□□□□ -1.32
RTTN-214ENST00000639128 GOLGA6L10A6NI86 522 aa6.8□□□□□ -1.32
RTTN-214ENST00000639128 H0YHG0 523 aa6.8□□□□□ -1.32
RTTN-214ENST00000639128 HSP90AB1P08238 724 aaKnown RBP6.8□□□□□ -1.32
RTTN-214ENST00000639128 TMCO5BA8MYB1 307 aa6.8□□□□□ -1.32
RTTN-214ENST00000639128 TCERG1O14776 1098 aaKnown RBP6.8□□□□□ -1.32
RTTN-214ENST00000639128 CCDC34Q96HJ3 373 aa6.8□□□□□ -1.32
RTTN-214ENST00000639128 ZBTB7CA1YPR0 619 aa6.8□□□□□ -1.32
RTTN-214ENST00000639128 CLGNO14967 610 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms