RNA–Protein interactions for RNA: ENST00000639098.1

COL11A1-212, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,113 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-212ENST00000639098 MS4A3Q96HJ5 214 aa10.01□□□□□ -0.81
COL11A1-212ENST00000639098 ATMINO43313 823 aaPredicted RBP9.99□□□□□ -0.81
COL11A1-212ENST00000639098 NPM1P06748 294 aaKnown RBP eCLIP9.99□□□□□ -0.81
COL11A1-212ENST00000639098 POTEGQ6S5H5 508 aa9.98□□□□□ -0.81
COL11A1-212ENST00000639098 METRNQ9UJH8 293 aa9.97□□□□□ -0.81
COL11A1-212ENST00000639098 LCE2DQ5TA82 110 aaPredicted RBP9.95□□□□□ -0.82
COL11A1-212ENST00000639098 C7P10643 843 aa9.92□□□□□ -0.82
COL11A1-212ENST00000639098 SLC39A7Q92504 469 aa9.91□□□□□ -0.82
COL11A1-212ENST00000639098 CCDC61Q9Y6R9 512 aa9.91□□□□□ -0.82
COL11A1-212ENST00000639098 POTEFA5A3E0 1075 aa9.9□□□□□ -0.82
COL11A1-212ENST00000639098 FBXO3Q9UK99 471 aa9.9□□□□□ -0.82
COL11A1-212ENST00000639098 ATN1P54259 1190 aaPredicted RBP9.89□□□□□ -0.83
COL11A1-212ENST00000639098 TRPC6Q9Y210 931 aa9.87□□□□□ -0.83
COL11A1-212ENST00000639098 KIF12Q96FN5 646 aa9.86□□□□□ -0.83
COL11A1-212ENST00000639098 TSPYL2Q9H2G4 693 aaPredicted RBP9.86□□□□□ -0.83
COL11A1-212ENST00000639098 PLEKHG5O94827 1062 aa9.85□□□□□ -0.83
COL11A1-212ENST00000639098 BMP2KQ9NSY1 1161 aaPredicted RBP9.82□□□□□ -0.84
COL11A1-212ENST00000639098 PCDH10Q9P2E7 1040 aa9.82□□□□□ -0.84
COL11A1-212ENST00000639098 MAMSTRQ6ZN01 415 aa9.81□□□□□ -0.84
COL11A1-212ENST00000639098 MIER1Q8N108 512 aa9.81□□□□□ -0.84
COL11A1-212ENST00000639098 MAP3K13O43283 966 aa9.78□□□□□ -0.84
COL11A1-212ENST00000639098 PLCD3Q8N3E9 789 aa9.78□□□□□ -0.84
COL11A1-212ENST00000639098 RASEFQ8IZ41 740 aa9.76□□□□□ -0.85
COL11A1-212ENST00000639098 FAM163AQ96GL9 167 aaPredicted RBP9.76□□□□□ -0.85
COL11A1-212ENST00000639098 COLQQ9Y215 455 aaPredicted RBP9.75□□□□□ -0.85
COL11A1-212ENST00000639098 ZBTB47Q9UFB7 747 aaPredicted RBP9.74□□□□□ -0.85
COL11A1-212ENST00000639098 TIE1P35590 1138 aa9.73□□□□□ -0.85
COL11A1-212ENST00000639098 SCUBE2Q9NQ36 999 aa9.73□□□□□ -0.85
COL11A1-212ENST00000639098 TTLL13PA6NNM8 815 aa9.71□□□□□ -0.86
COL11A1-212ENST00000639098 VASPP50552 380 aaPredicted RBP9.69□□□□□ -0.86
COL11A1-212ENST00000639098 TRIM35Q9UPQ4 493 aa9.62□□□□□ -0.87
COL11A1-212ENST00000639098 KLHL34Q8N239 644 aa9.61□□□□□ -0.87
COL11A1-212ENST00000639098 NUBP1P53384 320 aa9.6□□□□□ -0.87
COL11A1-212ENST00000639098 IER5LQ5T953 404 aa9.6□□□□□ -0.87
COL11A1-212ENST00000639098 SGIP1Q9BQI5 828 aa9.6□□□□□ -0.87
COL11A1-212ENST00000639098 SEC24BO95487 1268 aa9.59□□□□□ -0.87
COL11A1-212ENST00000639098 IFNL1Q8IU54 200 aa9.58□□□□□ -0.88
COL11A1-212ENST00000639098 CDAN1Q8IWY9 1227 aa9.58□□□□□ -0.88
COL11A1-212ENST00000639098 PCDHB13Q9Y5F0 798 aa9.57□□□□□ -0.88
COL11A1-212ENST00000639098 ST18O60284 1047 aa9.54□□□□□ -0.88
COL11A1-212ENST00000639098 IRX5P78411 483 aaPredicted RBP9.51□□□□□ -0.89
COL11A1-212ENST00000639098 IFNLR1Q8IU57 520 aaPredicted RBP9.51□□□□□ -0.89
COL11A1-212ENST00000639098 SLAIN1Q8ND83 568 aa9.51□□□□□ -0.89
COL11A1-212ENST00000639098 FAM212AQ96EL1 285 aa9.51□□□□□ -0.89
COL11A1-212ENST00000639098 TMEM106CQ9BVX2 250 aa9.5□□□□□ -0.89
COL11A1-212ENST00000639098 SPOCK2Q92563 424 aa9.49□□□□□ -0.89
COL11A1-212ENST00000639098 DCAF8Q5TAQ9 597 aa9.46□□□□□ -0.9
COL11A1-212ENST00000639098 GSE1Q14687 1217 aa9.45□□□□□ -0.9
COL11A1-212ENST00000639098 PLCG2P16885 1265 aa9.43□□□□□ -0.9
COL11A1-212ENST00000639098 SPNS2Q8IVW8 549 aa9.39□□□□□ -0.91
COL11A1-212ENST00000639098 OCEL1Q9H607 264 aa9.39□□□□□ -0.91
COL11A1-212ENST00000639098 MMRN1Q13201 1228 aa9.38□□□□□ -0.91
COL11A1-212ENST00000639098 PYGBP11216 843 aa9.36□□□□□ -0.91
COL11A1-212ENST00000639098 TMEM121BQ9BXQ6 578 aaPredicted RBP9.36□□□□□ -0.91
COL11A1-212ENST00000639098 CIZ1Q9ULV3 898 aaPredicted RBP9.36□□□□□ -0.91
COL11A1-212ENST00000639098 PCDHB8Q9UN66 801 aa9.36□□□□□ -0.91
COL11A1-212ENST00000639098 PDCD7Q8N8D1 485 aaKnown RBP9.34□□□□□ -0.91
COL11A1-212ENST00000639098 MARVELD3Q96A59 401 aa9.34□□□□□ -0.91
COL11A1-212ENST00000639098 CHRM1P11229 460 aaPredicted RBP9.32□□□□□ -0.92
COL11A1-212ENST00000639098 TRIM41Q8WV44 630 aa9.32□□□□□ -0.92
COL11A1-212ENST00000639098 POTEB3A0JP26 581 aa9.3□□□□□ -0.92
COL11A1-212ENST00000639098 POTEBQ6S5H4 581 aa9.3□□□□□ -0.92
COL11A1-212ENST00000639098 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.3□□□□□ -0.92
COL11A1-212ENST00000639098 SNPHO15079 494 aa9.27□□□□□ -0.93
COL11A1-212ENST00000639098 ZNF467Q7Z7K2 595 aaPredicted RBP9.25□□□□□ -0.93
COL11A1-212ENST00000639098 KRTAP3-3Q9BYR6 98 aa9.25□□□□□ -0.93
COL11A1-212ENST00000639098 KRTAP3-2Q9BYR7 98 aa9.25□□□□□ -0.93
COL11A1-212ENST00000639098 ILDR1Q86SU0 546 aaPredicted RBP9.23□□□□□ -0.93
COL11A1-212ENST00000639098 EMP3P54852 163 aa9.18□□□□□ -0.94
COL11A1-212ENST00000639098 HS3ST6Q96QI5 342 aa9.18□□□□□ -0.94
COL11A1-212ENST00000639098 DPY19L2Q6NUT2 758 aa9.16□□□□□ -0.94
COL11A1-212ENST00000639098 C3orf67Q6ZVT6 689 aa9.16□□□□□ -0.94
COL11A1-212ENST00000639098 L3MBTL3Q96JM7 780 aaPredicted RBP9.16□□□□□ -0.94
COL11A1-212ENST00000639098 MKRN3Q13064 507 aaKnown RBP9.15□□□□□ -0.94
COL11A1-212ENST00000639098 PDAP1Q13442 181 aaKnown RBP9.15□□□□□ -0.94
COL11A1-212ENST00000639098 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.15□□□□□ -0.94
COL11A1-212ENST00000639098 FAM205CA6NFA0 338 aa9.14□□□□□ -0.95
COL11A1-212ENST00000639098 ECM2O94769 699 aaPredicted RBP9.14□□□□□ -0.95
COL11A1-212ENST00000639098 PSEN1P49768 467 aa9.14□□□□□ -0.95
COL11A1-212ENST00000639098 TAOK2Q9UL54 1235 aa9.14□□□□□ -0.95
COL11A1-212ENST00000639098 HOXB3P14651 431 aaPredicted RBP9.13□□□□□ -0.95
COL11A1-212ENST00000639098 RIOK3O14730 519 aaKnown RBP9.12□□□□□ -0.95
COL11A1-212ENST00000639098 PKD2Q13563 968 aa9.11□□□□□ -0.95
COL11A1-212ENST00000639098 GOLGA2Q08379 1002 aa9.1□□□□□ -0.95
COL11A1-212ENST00000639098 VGFO15240 615 aaPredicted RBP9.07□□□□□ -0.96
COL11A1-212ENST00000639098 RNF25Q96BH1 459 aaPredicted RBP9.05□□□□□ -0.96
COL11A1-212ENST00000639098 BOLA1Q9Y3E2 137 aa9.04□□□□□ -0.96
COL11A1-212ENST00000639098 HOXB1P14653 301 aaPredicted RBP9.03□□□□□ -0.96
COL11A1-212ENST00000639098 CABP2Q9NPB3 220 aa9.02□□□□□ -0.97
COL11A1-212ENST00000639098 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9□□□□□ -0.97
COL11A1-212ENST00000639098 RGL2O15211 777 aa9□□□□□ -0.97
COL11A1-212ENST00000639098 ZFP91Q96JP5 570 aaPredicted RBP9□□□□□ -0.97
COL11A1-212ENST00000639098 TMEM92Q6UXU6 159 aa8.96□□□□□ -0.98
COL11A1-212ENST00000639098 STK25O00506 426 aa8.95□□□□□ -0.98
COL11A1-212ENST00000639098 AMER1Q5JTC6 1135 aaPredicted RBP8.95□□□□□ -0.98
COL11A1-212ENST00000639098 BCL11BQ9C0K0 894 aaPredicted RBP8.94□□□□□ -0.98
COL11A1-212ENST00000639098 STK24Q9Y6E0 443 aa8.94□□□□□ -0.98
COL11A1-212ENST00000639098 SOX12O15370 315 aa8.93□□□□□ -0.98
COL11A1-212ENST00000639098 EFCAB3Q8N7B9 438 aa8.93□□□□□ -0.98
COL11A1-212ENST00000639098 ERBB3P21860 1342 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms