RNA–Protein interactions for RNA: ENST00000638862.1

ZNF888-202, Transcript of zinc finger protein 888, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ZNF888, Length 4,195 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF888-202ENST00000638862 TRIM44Q96DX7 344 aaPredicted RBP11.63□□□□□ -0.55
ZNF888-202ENST00000638862 BCL11BQ9C0K0 894 aaPredicted RBP11.6□□□□□ -0.55
ZNF888-202ENST00000638862 CECR2Q9BXF3 1484 aa11.6□□□□□ -0.55
ZNF888-202ENST00000638862 PTMSP20962 102 aa11.59□□□□□ -0.55
ZNF888-202ENST00000638862 CANXP27824 592 aaKnown RBP11.59□□□□□ -0.55
ZNF888-202ENST00000638862 FAM50AQ14320 339 aaKnown RBP11.57□□□□□ -0.56
ZNF888-202ENST00000638862 NPM2Q86SE8 214 aaKnown RBP11.57□□□□□ -0.56
ZNF888-202ENST00000638862 AMER1Q5JTC6 1135 aaPredicted RBP11.56□□□□□ -0.56
ZNF888-202ENST00000638862 RBM10P98175 930 aaKnown RBP11.55□□□□□ -0.56
ZNF888-202ENST00000638862 PPM1GO15355 546 aaPredicted RBP11.55□□□□□ -0.56
ZNF888-202ENST00000638862 MIER1Q8N108 512 aa11.55□□□□□ -0.56
ZNF888-202ENST00000638862 RB1CC1Q8TDY2 1594 aa11.53□□□□□ -0.56
ZNF888-202ENST00000638862 FGD1P98174 961 aa11.52□□□□□ -0.57
ZNF888-202ENST00000638862 P3H3Q8IVL6 736 aa11.52□□□□□ -0.57
ZNF888-202ENST00000638862 IL27Q8NEV9 243 aa11.52□□□□□ -0.57
ZNF888-202ENST00000638862 PNNQ9H307 717 aaKnown RBP11.51□□□□□ -0.57
ZNF888-202ENST00000638862 BRD2P25440 801 aaKnown RBP11.5□□□□□ -0.57
ZNF888-202ENST00000638862 APPP05067 770 aa11.48□□□□□ -0.57
ZNF888-202ENST00000638862 PAXIP1Q6ZW49 1069 aaPredicted RBP11.48□□□□□ -0.57
ZNF888-202ENST00000638862 NACADO15069 1562 aa11.48□□□□□ -0.57
ZNF888-202ENST00000638862 FANCIQ9NVI1 1328 aa11.47□□□□□ -0.57
ZNF888-202ENST00000638862 CEP162Q5TB80 1403 aa11.46□□□□□ -0.57
ZNF888-202ENST00000638862 ANP32BQ92688 251 aaKnown RBP11.45□□□□□ -0.58
ZNF888-202ENST00000638862 MROH2BQ7Z745 1585 aa11.43□□□□□ -0.58
ZNF888-202ENST00000638862 RRP9O43818 475 aaKnown RBP11.43□□□□□ -0.58
ZNF888-202ENST00000638862 BBXQ8WY36 941 aaPredicted RBP11.42□□□□□ -0.58
ZNF888-202ENST00000638862 SOGA1O94964 1423 aa11.4□□□□□ -0.58
ZNF888-202ENST00000638862 DNTTIP2Q5QJE6 756 aaKnown RBP11.39□□□□□ -0.59
ZNF888-202ENST00000638862 PLPPR3Q6T4P5 718 aa11.39□□□□□ -0.59
ZNF888-202ENST00000638862 ARID4BQ4LE39 1312 aaPredicted RBP11.38□□□□□ -0.59
ZNF888-202ENST00000638862 USP35Q9P2H5 1018 aa11.38□□□□□ -0.59
ZNF888-202ENST00000638862 CLIP1P30622 1438 aa11.38□□□□□ -0.59
ZNF888-202ENST00000638862 ARID3CA6NKF2 412 aa11.38□□□□□ -0.59
ZNF888-202ENST00000638862 DHX37Q8IY37 1157 aaKnown RBP11.37□□□□□ -0.59
ZNF888-202ENST00000638862 AAMPQ13685 434 aa11.36□□□□□ -0.59
ZNF888-202ENST00000638862 NAP1L2Q9ULW6 460 aaPredicted RBP11.36□□□□□ -0.59
ZNF888-202ENST00000638862 LAS1LQ9Y4W2 734 aaKnown RBP11.36□□□□□ -0.59
ZNF888-202ENST00000638862 ABCC8Q09428 1581 aa11.36□□□□□ -0.59
ZNF888-202ENST00000638862 TRIM52Q96A61 297 aa11.35□□□□□ -0.59
ZNF888-202ENST00000638862 HSP90B1P14625 803 aaKnown RBP11.34□□□□□ -0.59
ZNF888-202ENST00000638862 CCDC88BA6NC98 1476 aa11.34□□□□□ -0.59
ZNF888-202ENST00000638862 WRNQ14191 1432 aaPredicted RBP eCLIP11.33□□□□□ -0.6
ZNF888-202ENST00000638862 TNIKQ9UKE5 1360 aa11.32□□□□□ -0.6
ZNF888-202ENST00000638862 L1TD1Q5T7N2 865 aaKnown RBP11.32□□□□□ -0.6
ZNF888-202ENST00000638862 HIRIP3Q9BW71 556 aaPredicted RBP11.32□□□□□ -0.6
ZNF888-202ENST00000638862 PATL2C9JE40 543 aaKnown RBP11.31□□□□□ -0.6
ZNF888-202ENST00000638862 DDRGK1Q96HY6 314 aa11.31□□□□□ -0.6
ZNF888-202ENST00000638862 CHMP4AQ9BY43 222 aa11.31□□□□□ -0.6
ZNF888-202ENST00000638862 WIZO95785 1651 aa11.3□□□□□ -0.6
ZNF888-202ENST00000638862 GOLGA3Q08378 1498 aa11.3□□□□□ -0.6
ZNF888-202ENST00000638862 DDX10Q13206 875 aaKnown RBP11.3□□□□□ -0.6
ZNF888-202ENST00000638862 HMGB1P09429 215 aaKnown RBP11.3□□□□□ -0.6
ZNF888-202ENST00000638862 TNNT3P45378 269 aaPredicted RBP11.29□□□□□ -0.6
ZNF888-202ENST00000638862 BAZ1AQ9NRL2 1556 aaPredicted RBP11.29□□□□□ -0.6
ZNF888-202ENST00000638862 PTMAP06454 111 aaKnown RBP11.28□□□□□ -0.6
ZNF888-202ENST00000638862 ANP32CO43423 234 aa11.28□□□□□ -0.6
ZNF888-202ENST00000638862 FAM43AQ8N2R8 423 aa11.27□□□□□ -0.61
ZNF888-202ENST00000638862 GSE1Q14687 1217 aa11.25□□□□□ -0.61
ZNF888-202ENST00000638862 EEA1Q15075 1411 aa11.25□□□□□ -0.61
ZNF888-202ENST00000638862 CCDC9Q9Y3X0 531 aaKnown RBP11.24□□□□□ -0.61
ZNF888-202ENST00000638862 CHMP4BQ9H444 224 aaKnown RBP11.24□□□□□ -0.61
ZNF888-202ENST00000638862 IPO9Q96P70 1041 aaKnown RBP11.24□□□□□ -0.61
ZNF888-202ENST00000638862 MAP7D2Q96T17 732 aa11.23□□□□□ -0.61
ZNF888-202ENST00000638862 BRPF3Q9ULD4 1205 aa11.21□□□□□ -0.61
ZNF888-202ENST00000638862 RUSC2Q8N2Y8 1516 aa11.21□□□□□ -0.62
ZNF888-202ENST00000638862 PPP4R2Q9NY27 417 aa11.2□□□□□ -0.62
ZNF888-202ENST00000638862 CEP164Q9UPV0 1460 aa11.2□□□□□ -0.62
ZNF888-202ENST00000638862 TPRNQ4KMQ1 711 aa11.19□□□□□ -0.62
ZNF888-202ENST00000638862 CHIC2Q9UKJ5 165 aa11.19□□□□□ -0.62
ZNF888-202ENST00000638862 BAZ1BQ9UIG0 1483 aaKnown RBP11.18□□□□□ -0.62
ZNF888-202ENST00000638862 BCCIPQ9P287 314 aaKnown RBP eCLIP11.18□□□□□ -0.62
ZNF888-202ENST00000638862 IRX6P78412 446 aaPredicted RBP11.17□□□□□ -0.62
ZNF888-202ENST00000638862 FBLN2P98095 1184 aa11.17□□□□□ -0.62
ZNF888-202ENST00000638862 KANK4Q5T7N3 995 aaPredicted RBP11.17□□□□□ -0.62
ZNF888-202ENST00000638862 AEBP2Q6ZN18 517 aaPredicted RBP11.17□□□□□ -0.62
ZNF888-202ENST00000638862 ARID3AQ99856 593 aa11.17□□□□□ -0.62
ZNF888-202ENST00000638862 MSH5O43196 834 aa11.16□□□□□ -0.62
ZNF888-202ENST00000638862 SIN3AQ96ST3 1273 aa11.15□□□□□ -0.63
ZNF888-202ENST00000638862 TONSLQ96HA7 1378 aa11.14□□□□□ -0.63
ZNF888-202ENST00000638862 IPO4Q8TEX9 1081 aaKnown RBP11.14□□□□□ -0.63
ZNF888-202ENST00000638862 IRX3P78415 501 aaPredicted RBP11.13□□□□□ -0.63
ZNF888-202ENST00000638862 WWC1Q8IX03 1113 aa11.13□□□□□ -0.63
ZNF888-202ENST00000638862 TPM2P07951 284 aa11.13□□□□□ -0.63
ZNF888-202ENST00000638862 MTERF4Q7Z6M4 381 aaKnown RBP11.13□□□□□ -0.63
ZNF888-202ENST00000638862 FTSJ3Q8IY81 847 aaKnown RBP11.13□□□□□ -0.63
ZNF888-202ENST00000638862 PLCD3Q8N3E9 789 aa11.13□□□□□ -0.63
ZNF888-202ENST00000638862 HNRNPUQ00839 825 aaKnown RBP eCLIP11.12□□□□□ -0.63
ZNF888-202ENST00000638862 PDCL3Q9H2J4 239 aa11.12□□□□□ -0.63
ZNF888-202ENST00000638862 MSNP26038 577 aaKnown RBP11.11□□□□□ -0.63
ZNF888-202ENST00000638862 ZNF777Q9ULD5 760 aaPredicted RBP11.11□□□□□ -0.63
ZNF888-202ENST00000638862 RGS3P49796 1198 aa11.11□□□□□ -0.63
ZNF888-202ENST00000638862 TAF3Q5VWG9 929 aa11.1□□□□□ -0.63
ZNF888-202ENST00000638862 ZNF526Q8TF50 670 aaPredicted RBP11.09□□□□□ -0.63
ZNF888-202ENST00000638862 FBXO3Q9UK99 471 aa11.09□□□□□ -0.63
ZNF888-202ENST00000638862 VPS8Q8N3P4 1428 aa11.09□□□□□ -0.63
ZNF888-202ENST00000638862 CLGNO14967 610 aa11.08□□□□□ -0.64
ZNF888-202ENST00000638862 CALRP27797 417 aaKnown RBP11.08□□□□□ -0.64
ZNF888-202ENST00000638862 FAM9BQ8IZU0 186 aa11.08□□□□□ -0.64
ZNF888-202ENST00000638862 RRP7BPQ9NSQ0 103 aa11.08□□□□□ -0.64
ZNF888-202ENST00000638862 TOP2AP11388 1531 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms