RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 SENP3-EIF4A1A0A087X0R7 540 aa21.73■■□□□ 1.07
CACNA1A-258ENST00000638029 IRX6P78412 446 aaPredicted RBP21.73■■□□□ 1.07
CACNA1A-258ENST00000638029 ZRSR1Q15695 479 aaKnown RBP21.72■■□□□ 1.07
CACNA1A-258ENST00000638029 TRIM44Q96DX7 344 aaPredicted RBP21.71■■□□□ 1.07
CACNA1A-258ENST00000638029 PTMAP06454 111 aaKnown RBP21.7■■□□□ 1.06
CACNA1A-258ENST00000638029 PPM1GO15355 546 aaPredicted RBP21.7■■□□□ 1.06
CACNA1A-258ENST00000638029 PPP1R15AO75807 674 aaPredicted RBP21.69■■□□□ 1.06
CACNA1A-258ENST00000638029 PLCB2Q00722 1185 aa21.69■■□□□ 1.06
CACNA1A-258ENST00000638029 RTN4Q9NQC3 1192 aaKnown RBP21.69■■□□□ 1.06
CACNA1A-258ENST00000638029 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.69■■□□□ 1.06
CACNA1A-258ENST00000638029 ANO8Q9HCE9 1232 aaPredicted RBP21.68■■□□□ 1.06
CACNA1A-258ENST00000638029 NAP1L2Q9ULW6 460 aaPredicted RBP21.68■■□□□ 1.06
CACNA1A-258ENST00000638029 HNRNPUQ00839 825 aaKnown RBP eCLIP21.67■■□□□ 1.06
CACNA1A-258ENST00000638029 WDR43Q15061 677 aaKnown RBP eCLIP21.66■■□□□ 1.06
CACNA1A-258ENST00000638029 GOLGA2Q08379 1002 aa21.65■■□□□ 1.06
CACNA1A-258ENST00000638029 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.64■■□□□ 1.05
CACNA1A-258ENST00000638029 CCDC136Q96JN2 1154 aa21.62■■□□□ 1.05
CACNA1A-258ENST00000638029 PDE4CQ08493 712 aa21.6■■□□□ 1.05
CACNA1A-258ENST00000638029 KRI1Q8N9T8 703 aaKnown RBP21.59■■□□□ 1.05
CACNA1A-258ENST00000638029 LAS1LQ9Y4W2 734 aaKnown RBP21.58■■□□□ 1.05
CACNA1A-258ENST00000638029 FBXO3Q9UK99 471 aa21.57■■□□□ 1.04
CACNA1A-258ENST00000638029 TMC1Q8TDI8 760 aa21.57■■□□□ 1.04
CACNA1A-258ENST00000638029 TONSLQ96HA7 1378 aa21.56■■□□□ 1.04
CACNA1A-258ENST00000638029 NAP1L5Q96NT1 182 aaPredicted RBP21.56■■□□□ 1.04
CACNA1A-258ENST00000638029 TRHP20396 242 aaPredicted RBP21.51■■□□□ 1.03
CACNA1A-258ENST00000638029 CHIC2Q9UKJ5 165 aa21.5■■□□□ 1.03
CACNA1A-258ENST00000638029 ERICH6BQ5W0A0 696 aa21.48■■□□□ 1.03
CACNA1A-258ENST00000638029 FGD1P98174 961 aa21.43■■□□□ 1.02
CACNA1A-258ENST00000638029 DDX10Q13206 875 aaKnown RBP21.43■■□□□ 1.02
CACNA1A-258ENST00000638029 ARID3AQ99856 593 aa21.4■■□□□ 1.02
CACNA1A-258ENST00000638029 KCNH8Q96L42 1107 aa21.4■■□□□ 1.02
CACNA1A-258ENST00000638029 SOX12O15370 315 aa21.39■■□□□ 1.02
CACNA1A-258ENST00000638029 OS9Q13438 667 aaPredicted RBP21.39■■□□□ 1.02
CACNA1A-258ENST00000638029 HIRIP3Q9BW71 556 aaPredicted RBP21.36■■□□□ 1.01
CACNA1A-258ENST00000638029 GOLGA6L22H0YM25 854 aa21.35■■□□□ 1.01
CACNA1A-258ENST00000638029 SCRIBQ14160 1630 aa21.33■■□□□ 1
CACNA1A-258ENST00000638029 CASC1Q6TDU7 716 aa21.32■■□□□ 1
CACNA1A-258ENST00000638029 KCNJ4P48050 445 aa21.31■■□□□ 1
CACNA1A-258ENST00000638029 CSRNP3Q8WYN3 585 aa21.31■■□□□ 1
CACNA1A-258ENST00000638029 BECN1Q14457 450 aa21.3■■□□□ 1
CACNA1A-258ENST00000638029 NOC3LQ8WTT2 800 aaKnown RBP21.28■■□□□ 1
CACNA1A-258ENST00000638029 ZNF330Q9Y3S2 320 aaPredicted RBP21.28■■□□□ 1
CACNA1A-258ENST00000638029 CCDC9Q9Y3X0 531 aaKnown RBP21.27■■□□□ 1
CACNA1A-258ENST00000638029 NEUROD2Q15784 382 aa21.27■■□□□ 1
CACNA1A-258ENST00000638029 FTSJ3Q8IY81 847 aaKnown RBP21.24■□□□□ 0.99
CACNA1A-258ENST00000638029 DRC7Q8IY82 874 aa21.23■□□□□ 0.99
CACNA1A-258ENST00000638029 WWC1Q8IX03 1113 aa21.22■□□□□ 0.99
CACNA1A-258ENST00000638029 RGL3Q3MIN7 710 aa21.22■□□□□ 0.99
CACNA1A-258ENST00000638029 GOLGA6L6A8MZA4 724 aa21.21■□□□□ 0.99
CACNA1A-258ENST00000638029 SPRYD3Q8NCJ5 442 aa21.2■□□□□ 0.98
CACNA1A-258ENST00000638029 TSPY4P0CV99 314 aa21.2■□□□□ 0.98
CACNA1A-258ENST00000638029 TSPY10P0CW01 314 aa21.2■□□□□ 0.98
CACNA1A-258ENST00000638029 G3V3G9 751 aa21.18■□□□□ 0.98
CACNA1A-258ENST00000638029 DCAF8Q5TAQ9 597 aa21.18■□□□□ 0.98
CACNA1A-258ENST00000638029 TMX4Q9H1E5 349 aaPredicted RBP21.18■□□□□ 0.98
CACNA1A-258ENST00000638029 MRS2Q9HD23 443 aa21.17■□□□□ 0.98
CACNA1A-258ENST00000638029 MLECQ14165 292 aa21.16■□□□□ 0.98
CACNA1A-258ENST00000638029 GNL2Q13823 731 aaKnown RBP21.15■□□□□ 0.98
CACNA1A-258ENST00000638029 DDRGK1Q96HY6 314 aa21.14■□□□□ 0.97
CACNA1A-258ENST00000638029 HSP90AB1P08238 724 aaKnown RBP21.13■□□□□ 0.97
CACNA1A-258ENST00000638029 PNNQ9H307 717 aaKnown RBP21.12■□□□□ 0.97
CACNA1A-258ENST00000638029 A0A0U1RQG5 324 aaPredicted RBP21.1■□□□□ 0.97
CACNA1A-258ENST00000638029 CNKSR2Q8WXI2 1034 aa21.1■□□□□ 0.97
CACNA1A-258ENST00000638029 ANP32EQ9BTT0 268 aa21.09■□□□□ 0.97
CACNA1A-258ENST00000638029 KIAA2012Q0VF49 1180 aa21.08■□□□□ 0.97
CACNA1A-258ENST00000638029 CHMP7Q8WUX9 453 aaPredicted RBP21.07■□□□□ 0.96
CACNA1A-258ENST00000638029 POGKQ9P215 609 aa21.06■□□□□ 0.96
CACNA1A-258ENST00000638029 MTUS2Q5JR59 1369 aa21.06■□□□□ 0.96
CACNA1A-258ENST00000638029 VPS53Q5VIR6 699 aa21.06■□□□□ 0.96
CACNA1A-258ENST00000638029 GOLGA6L4A6NEF3 574 aa21.05■□□□□ 0.96
CACNA1A-258ENST00000638029 CREBRFQ8IUR6 639 aa21.05■□□□□ 0.96
CACNA1A-258ENST00000638029 PHF23Q9BUL5 403 aaPredicted RBP21.04■□□□□ 0.96
CACNA1A-258ENST00000638029 PAK3O75914 559 aaPredicted RBP21.03■□□□□ 0.96
CACNA1A-258ENST00000638029 RGS3P49796 1198 aa21.03■□□□□ 0.96
CACNA1A-258ENST00000638029 FRAT1Q92837 279 aaPredicted RBP21.02■□□□□ 0.96
CACNA1A-258ENST00000638029 U2SURPO15042 1029 aaKnown RBP21■□□□□ 0.95
CACNA1A-258ENST00000638029 KLHL34Q8N239 644 aa21■□□□□ 0.95
CACNA1A-258ENST00000638029 CHAF1AQ13111 956 aaPredicted RBP20.99■□□□□ 0.95
CACNA1A-258ENST00000638029 PATL2C9JE40 543 aaKnown RBP20.99■□□□□ 0.95
CACNA1A-258ENST00000638029 CFAP53Q96M91 514 aa20.98■□□□□ 0.95
CACNA1A-258ENST00000638029 MAPK8IP3Q9UPT6 1336 aa20.97■□□□□ 0.95
CACNA1A-258ENST00000638029 NRDCO43847 1150 aa20.96■□□□□ 0.95
CACNA1A-258ENST00000638029 APBB1O00213 710 aa20.96■□□□□ 0.95
CACNA1A-258ENST00000638029 MSH5O43196 834 aa20.96■□□□□ 0.95
CACNA1A-258ENST00000638029 CHMP3Q9Y3E7 222 aa20.95■□□□□ 0.94
CACNA1A-258ENST00000638029 TNNT3P45378 269 aaPredicted RBP20.95■□□□□ 0.94
CACNA1A-258ENST00000638029 EIF4G2P78344 907 aaKnown RBP eCLIP20.94■□□□□ 0.94
CACNA1A-258ENST00000638029 AEBP2Q6ZN18 517 aaPredicted RBP20.93■□□□□ 0.94
CACNA1A-258ENST00000638029 SAFB2Q14151 953 aaKnown RBP eCLIP20.93■□□□□ 0.94
CACNA1A-258ENST00000638029 RRP7BPQ9NSQ0 103 aa20.92■□□□□ 0.94
CACNA1A-258ENST00000638029 CSB-PGBD3P0DP91 1061 aa20.92■□□□□ 0.94
CACNA1A-258ENST00000638029 MSNP26038 577 aaKnown RBP20.91■□□□□ 0.94
CACNA1A-258ENST00000638029 KNSTRNQ9Y448 316 aa20.87■□□□□ 0.93
CACNA1A-258ENST00000638029 HSP90B1P14625 803 aaKnown RBP20.86■□□□□ 0.93
CACNA1A-258ENST00000638029 RAD21O60216 631 aa20.85■□□□□ 0.93
CACNA1A-258ENST00000638029 CC2D1BQ5T0F9 858 aaKnown RBP20.82■□□□□ 0.92
CACNA1A-258ENST00000638029 TAF7LQ5H9L4 462 aa20.81■□□□□ 0.92
CACNA1A-258ENST00000638029 CDCA8Q53HL2 280 aa20.81■□□□□ 0.92
CACNA1A-258ENST00000638029 DEKP35659 375 aaKnown RBP20.81■□□□□ 0.92
CACNA1A-258ENST00000638029 L1TD1Q5T7N2 865 aaKnown RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms