RNA–Protein interactions for RNA: ENST00000637533.1

MECP2-222, Transcript of methyl-CpG binding protein 2, human

TSL 5

Gene MECP2, Length 140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MECP2-222	ENST00000637533	VGF	O15240	615 aa	Predicted RBP	2.72	□□□□□ -1.97
MECP2-222	ENST00000637533	TSHZ2	Q9NRE2	1034 aa		2.71	□□□□□ -1.98
MECP2-222	ENST00000637533		U3KPZ7	1027 aa	Predicted RBP	2.71	□□□□□ -1.98
MECP2-222	ENST00000637533	TTBK1	Q5TCY1	1321 aa	Predicted RBP	2.7	□□□□□ -1.98
MECP2-222	ENST00000637533	RIOK3	O14730	519 aa	Known RBP	2.7	□□□□□ -1.98
MECP2-222	ENST00000637533	PELP1	Q8IZL8	1130 aa	Known RBP	2.7	□□□□□ -1.98
MECP2-222	ENST00000637533	FAM212A	Q96EL1	285 aa		2.7	□□□□□ -1.98
MECP2-222	ENST00000637533	ZNF692	Q9BU19	519 aa	Predicted RBP	2.7	□□□□□ -1.98
MECP2-222	ENST00000637533	RSPH6A	Q9H0K4	717 aa		2.7	□□□□□ -1.98
MECP2-222	ENST00000637533	PODXL2	Q9NZ53	605 aa		2.7	□□□□□ -1.98
MECP2-222	ENST00000637533	FLII	Q13045	1269 aa		2.69	□□□□□ -1.98
MECP2-222	ENST00000637533	SGIP1	Q9BQI5	828 aa		2.69	□□□□□ -1.98
MECP2-222	ENST00000637533	RGL2	O15211	777 aa		2.68	□□□□□ -1.98
MECP2-222	ENST00000637533	NPM2	Q86SE8	214 aa	Known RBP	2.68	□□□□□ -1.98
MECP2-222	ENST00000637533	ARHGEF1	Q92888	912 aa	Known RBP	2.68	□□□□□ -1.98
MECP2-222	ENST00000637533	STK25	O00506	426 aa		2.67	□□□□□ -1.98
MECP2-222	ENST00000637533	NPM1	P06748	294 aa	Known RBP eCLIP	2.67	□□□□□ -1.98
MECP2-222	ENST00000637533	CHRM1	P11229	460 aa	Predicted RBP	2.67	□□□□□ -1.98
MECP2-222	ENST00000637533	PDIA4	P13667	645 aa	Known RBP	2.67	□□□□□ -1.98
MECP2-222	ENST00000637533	TRH	P20396	242 aa	Predicted RBP	2.67	□□□□□ -1.98
MECP2-222	ENST00000637533	NEUROD2	Q15784	382 aa		2.67	□□□□□ -1.98
MECP2-222	ENST00000637533	LMOD2	Q6P5Q4	547 aa		2.67	□□□□□ -1.98
MECP2-222	ENST00000637533	KCTD17	Q8N5Z5	321 aa		2.67	□□□□□ -1.98
MECP2-222	ENST00000637533	ATF5	Q9Y2D1	282 aa	Predicted RBP	2.67	□□□□□ -1.98
MECP2-222	ENST00000637533	WWC1	Q8IX03	1113 aa		2.66	□□□□□ -1.98
MECP2-222	ENST00000637533	BCL11A	Q9H165	835 aa		2.66	□□□□□ -1.98
MECP2-222	ENST00000637533	POLA2	Q14181	598 aa		2.65	□□□□□ -1.99
MECP2-222	ENST00000637533	ZMYND15	Q9H091	742 aa		2.65	□□□□□ -1.99
MECP2-222	ENST00000637533	APBB1	O00213	710 aa		2.64	□□□□□ -1.99
MECP2-222	ENST00000637533	CAPN15	O75808	1086 aa		2.64	□□□□□ -1.99
MECP2-222	ENST00000637533	DCAF8	Q5TAQ9	597 aa		2.64	□□□□□ -1.99
MECP2-222	ENST00000637533	ZNF467	Q7Z7K2	595 aa	Predicted RBP	2.64	□□□□□ -1.99
MECP2-222	ENST00000637533	C1QBP	Q07021	282 aa	Known RBP	2.63	□□□□□ -1.99
MECP2-222	ENST00000637533	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	2.63	□□□□□ -1.99
MECP2-222	ENST00000637533	DDRGK1	Q96HY6	314 aa		2.63	□□□□□ -1.99
MECP2-222	ENST00000637533	AK7	Q96M32	723 aa		2.63	□□□□□ -1.99
MECP2-222	ENST00000637533	PRM3	Q9NNZ6	103 aa		2.63	□□□□□ -1.99
MECP2-222	ENST00000637533	MKRN4P	Q13434	485 aa	Predicted RBP	2.62	□□□□□ -1.99
MECP2-222	ENST00000637533	SSUH2	Q9Y2M2	353 aa		2.62	□□□□□ -1.99
MECP2-222	ENST00000637533	STK24	Q9Y6E0	443 aa		2.62	□□□□□ -1.99
MECP2-222	ENST00000637533	GTPBP6	O43824	516 aa	Predicted RBP	2.61	□□□□□ -1.99
MECP2-222	ENST00000637533	BRPF1	P55201	1214 aa	Predicted RBP	2.61	□□□□□ -1.99
MECP2-222	ENST00000637533	E2F4	Q16254	413 aa		2.61	□□□□□ -1.99
MECP2-222	ENST00000637533	PABPN1	Q86U42	306 aa	Known RBP eCLIP	2.61	□□□□□ -1.99
MECP2-222	ENST00000637533	KRI1	Q8N9T8	703 aa	Known RBP	2.61	□□□□□ -1.99
MECP2-222	ENST00000637533	SPDYE1	Q8NFV5	336 aa	Predicted RBP	2.61	□□□□□ -1.99
MECP2-222	ENST00000637533	RAD21	O60216	631 aa		2.6	□□□□□ -1.99
MECP2-222	ENST00000637533	CDK11A	Q9UQ88	783 aa	Predicted RBP	2.6	□□□□□ -1.99
MECP2-222	ENST00000637533	ZNF316	A6NFI3	1004 aa	Predicted RBP	2.59	□□□□□ -1.99
MECP2-222	ENST00000637533	PDE4A	P27815	886 aa		2.59	□□□□□ -1.99
MECP2-222	ENST00000637533	CANX	P27824	592 aa	Known RBP	2.59	□□□□□ -1.99
MECP2-222	ENST00000637533	CCDC97	Q96F63	343 aa	Predicted RBP	2.59	□□□□□ -1.99
MECP2-222	ENST00000637533	RBM42	Q9BTD8	480 aa	Known RBP	2.59	□□□□□ -1.99
MECP2-222	ENST00000637533	BCL11B	Q9C0K0	894 aa	Predicted RBP	2.59	□□□□□ -1.99
MECP2-222	ENST00000637533	GOPC	Q9HD26	462 aa		2.59	□□□□□ -1.99
MECP2-222	ENST00000637533	SERPINA10	Q9UK55	444 aa		2.59	□□□□□ -1.99
MECP2-222	ENST00000637533	ACIN1	Q9UKV3	1341 aa	Known RBP	2.59	□□□□□ -2
MECP2-222	ENST00000637533	SPDYE16	A6NNV3	312 aa	Predicted RBP	2.58	□□□□□ -2
MECP2-222	ENST00000637533	SUPT5H	O00267	1087 aa	Known RBP	2.58	□□□□□ -2
MECP2-222	ENST00000637533	PAK3	O75914	559 aa	Predicted RBP	2.58	□□□□□ -2
MECP2-222	ENST00000637533	ITGAE	P38570	1179 aa		2.58	□□□□□ -2
MECP2-222	ENST00000637533	NLRP6	P59044	892 aa		2.58	□□□□□ -2
MECP2-222	ENST00000637533	PDAP1	Q13442	181 aa	Known RBP	2.58	□□□□□ -2
MECP2-222	ENST00000637533	ZC3H15	Q8WU90	426 aa	Known RBP	2.58	□□□□□ -2
MECP2-222	ENST00000637533	PCGF6	Q9BYE7	350 aa		2.58	□□□□□ -2
MECP2-222	ENST00000637533	ARIH1	Q9Y4X5	557 aa	Predicted RBP	2.58	□□□□□ -2
MECP2-222	ENST00000637533	TESPA1	A2RU30	521 aa	Predicted RBP	2.57	□□□□□ -2
MECP2-222	ENST00000637533	SOX12	O15370	315 aa		2.57	□□□□□ -2
MECP2-222	ENST00000637533	ZMYND10	O75800	440 aa		2.57	□□□□□ -2
MECP2-222	ENST00000637533	PPP1R15A	O75807	674 aa	Predicted RBP	2.57	□□□□□ -2
MECP2-222	ENST00000637533	B4GALNT3	Q6L9W6	998 aa		2.57	□□□□□ -2
MECP2-222	ENST00000637533	GPIHBP1	Q8IV16	184 aa		2.57	□□□□□ -2
MECP2-222	ENST00000637533	MYT1L	Q9UL68	1186 aa		2.57	□□□□□ -2
MECP2-222	ENST00000637533		A6NJR5	290 aa		2.56	□□□□□ -2
MECP2-222	ENST00000637533	DIXDC1	Q155Q3	683 aa		2.56	□□□□□ -2
MECP2-222	ENST00000637533	BARGIN	Q6ZT62	677 aa		2.56	□□□□□ -2
MECP2-222	ENST00000637533	KCNV2	Q8TDN2	545 aa		2.56	□□□□□ -2
MECP2-222	ENST00000637533	PCMTD1	Q96MG8	357 aa	Predicted RBP	2.56	□□□□□ -2
MECP2-222	ENST00000637533	PRR29	P0C7W0	189 aa		2.55	□□□□□ -2
MECP2-222	ENST00000637533	UBTF	P17480	764 aa	Known RBP	2.55	□□□□□ -2
MECP2-222	ENST00000637533	GOLGA2	Q08379	1002 aa		2.55	□□□□□ -2
MECP2-222	ENST00000637533	PPARGC1B	Q86YN6	1023 aa	Known RBP	2.55	□□□□□ -2
MECP2-222	ENST00000637533	TRAIP	Q9BWF2	469 aa		2.55	□□□□□ -2
MECP2-222	ENST00000637533	SHROOM4	Q9ULL8	1493 aa		2.55	□□□□□ -2
MECP2-222	ENST00000637533	MINK1	Q8N4C8	1332 aa	Predicted RBP	2.54	□□□□□ -2
MECP2-222	ENST00000637533	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	2.54	□□□□□ -2
MECP2-222	ENST00000637533	HSP90B1	P14625	803 aa	Known RBP	2.54	□□□□□ -2
MECP2-222	ENST00000637533	TMCO4	Q5TGY1	634 aa		2.54	□□□□□ -2
MECP2-222	ENST00000637533	ZFP91	Q96JP5	570 aa	Predicted RBP	2.54	□□□□□ -2
MECP2-222	ENST00000637533	SLC24A3	Q9HC58	644 aa		2.54	□□□□□ -2
MECP2-222	ENST00000637533		E9PSI1	815 aa		2.53	□□□□□ -2
MECP2-222	ENST00000637533	ERCC3	P19447	782 aa		2.53	□□□□□ -2
MECP2-222	ENST00000637533	NUBP1	P53384	320 aa		2.53	□□□□□ -2
MECP2-222	ENST00000637533	NKX1-1	Q15270	411 aa	Predicted RBP	2.53	□□□□□ -2
MECP2-222	ENST00000637533	DDX27	Q96GQ7	796 aa	Known RBP	2.53	□□□□□ -2
MECP2-222	ENST00000637533	CDK11B	P21127	795 aa	Known RBP	2.52	□□□□□ -2.01
MECP2-222	ENST00000637533	ZNF579	Q8NAF0	562 aa	Known RBP	2.52	□□□□□ -2.01
MECP2-222	ENST00000637533	ZNF592	Q92610	1267 aa		2.52	□□□□□ -2.01
MECP2-222	ENST00000637533	AKT1S1	Q96B36	256 aa		2.52	□□□□□ -2.01
MECP2-222	ENST00000637533	KDM4C	Q9H3R0	1056 aa		2.52	□□□□□ -2.01

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