RNA–Protein interactions for RNA: ENST00000636868.1

ATRX-222, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-222ENST00000636868 ATMINO43313 823 aaPredicted RBP12.51□□□□□ -0.41
ATRX-222ENST00000636868 C7P10643 843 aa12.5□□□□□ -0.41
ATRX-222ENST00000636868 NPM1P06748 294 aaKnown RBP eCLIP12.48□□□□□ -0.41
ATRX-222ENST00000636868 MAMSTRQ6ZN01 415 aa12.48□□□□□ -0.41
ATRX-222ENST00000636868 FAM163AQ96GL9 167 aaPredicted RBP12.48□□□□□ -0.41
ATRX-222ENST00000636868 MNX1P50219 401 aaPredicted RBP12.46□□□□□ -0.41
ATRX-222ENST00000636868 SCUBE2Q9NQ36 999 aa12.42□□□□□ -0.42
ATRX-222ENST00000636868 ATN1P54259 1190 aaPredicted RBP12.37□□□□□ -0.43
ATRX-222ENST00000636868 SPDYE4A6NLX3 237 aa12.35□□□□□ -0.43
ATRX-222ENST00000636868 POTEFA5A3E0 1075 aa12.31□□□□□ -0.44
ATRX-222ENST00000636868 TSPYL2Q9H2G4 693 aaPredicted RBP12.29□□□□□ -0.44
ATRX-222ENST00000636868 CDAN1Q8IWY9 1227 aa12.26□□□□□ -0.45
ATRX-222ENST00000636868 BMP2KQ9NSY1 1161 aaPredicted RBP12.25□□□□□ -0.45
ATRX-222ENST00000636868 CCDC61Q9Y6R9 512 aa12.25□□□□□ -0.45
ATRX-222ENST00000636868 TRPC6Q9Y210 931 aa12.24□□□□□ -0.45
ATRX-222ENST00000636868 KIF12Q96FN5 646 aa12.21□□□□□ -0.45
ATRX-222ENST00000636868 COLQQ9Y215 455 aaPredicted RBP12.16□□□□□ -0.46
ATRX-222ENST00000636868 TIE1P35590 1138 aa12.14□□□□□ -0.47
ATRX-222ENST00000636868 CSRNP3Q8WYN3 585 aa12.14□□□□□ -0.47
ATRX-222ENST00000636868 MAP3K13O43283 966 aa12.12□□□□□ -0.47
ATRX-222ENST00000636868 SEC24BO95487 1268 aa12.12□□□□□ -0.47
ATRX-222ENST00000636868 TTLL13PA6NNM8 815 aa12.08□□□□□ -0.48
ATRX-222ENST00000636868 ST18O60284 1047 aa12.07□□□□□ -0.48
ATRX-222ENST00000636868 SLAIN1Q8ND83 568 aa12.03□□□□□ -0.48
ATRX-222ENST00000636868 TRIM35Q9UPQ4 493 aa12.02□□□□□ -0.49
ATRX-222ENST00000636868 MMRN1Q13201 1228 aa12.01□□□□□ -0.49
ATRX-222ENST00000636868 RASEFQ8IZ41 740 aa12□□□□□ -0.49
ATRX-222ENST00000636868 IER5LQ5T953 404 aa11.99□□□□□ -0.49
ATRX-222ENST00000636868 SPNS2Q8IVW8 549 aa11.97□□□□□ -0.49
ATRX-222ENST00000636868 PROM2Q8N271 834 aa11.92□□□□□ -0.5
ATRX-222ENST00000636868 PCDHB13Q9Y5F0 798 aa11.9□□□□□ -0.5
ATRX-222ENST00000636868 PLEKHG5O94827 1062 aa11.87□□□□□ -0.51
ATRX-222ENST00000636868 PLCG2P16885 1265 aa11.86□□□□□ -0.51
ATRX-222ENST00000636868 SGIP1Q9BQI5 828 aa11.86□□□□□ -0.51
ATRX-222ENST00000636868 MIER1Q8N108 512 aa11.85□□□□□ -0.51
ATRX-222ENST00000636868 TMEM121BQ9BXQ6 578 aaPredicted RBP11.85□□□□□ -0.51
ATRX-222ENST00000636868 MARVELD3Q96A59 401 aa11.83□□□□□ -0.52
ATRX-222ENST00000636868 IFNL1Q8IU54 200 aa11.82□□□□□ -0.52
ATRX-222ENST00000636868 TMEM106CQ9BVX2 250 aa11.82□□□□□ -0.52
ATRX-222ENST00000636868 IRX5P78411 483 aaPredicted RBP11.8□□□□□ -0.52
ATRX-222ENST00000636868 SNPHO15079 494 aa11.75□□□□□ -0.53
ATRX-222ENST00000636868 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.72□□□□□ -0.53
ATRX-222ENST00000636868 NUBP1P53384 320 aa11.7□□□□□ -0.54
ATRX-222ENST00000636868 PLCD3Q8N3E9 789 aa11.69□□□□□ -0.54
ATRX-222ENST00000636868 OCEL1Q9H607 264 aa11.69□□□□□ -0.54
ATRX-222ENST00000636868 EMP3P54852 163 aa11.67□□□□□ -0.54
ATRX-222ENST00000636868 EHMT2Q96KQ7 1210 aa11.67□□□□□ -0.54
ATRX-222ENST00000636868 KRTAP3-3Q9BYR6 98 aa11.66□□□□□ -0.54
ATRX-222ENST00000636868 KRTAP3-2Q9BYR7 98 aa11.66□□□□□ -0.54
ATRX-222ENST00000636868 FAM212AQ96EL1 285 aa11.63□□□□□ -0.55
ATRX-222ENST00000636868 POTEB3A0JP26 581 aa11.62□□□□□ -0.55
ATRX-222ENST00000636868 POTEBQ6S5H4 581 aa11.62□□□□□ -0.55
ATRX-222ENST00000636868 HS3ST6Q96QI5 342 aa11.61□□□□□ -0.55
ATRX-222ENST00000636868 ZBTB47Q9UFB7 747 aaPredicted RBP11.6□□□□□ -0.55
ATRX-222ENST00000636868 FAM205CA6NFA0 338 aa11.58□□□□□ -0.56
ATRX-222ENST00000636868 C3orf67Q6ZVT6 689 aa11.56□□□□□ -0.56
ATRX-222ENST00000636868 PDCD7Q8N8D1 485 aaKnown RBP11.53□□□□□ -0.56
ATRX-222ENST00000636868 PYGBP11216 843 aa11.52□□□□□ -0.57
ATRX-222ENST00000636868 PCDHB8Q9UN66 801 aa11.52□□□□□ -0.57
ATRX-222ENST00000636868 DCAF8Q5TAQ9 597 aa11.44□□□□□ -0.58
ATRX-222ENST00000636868 L3MBTL3Q96JM7 780 aaPredicted RBP11.44□□□□□ -0.58
ATRX-222ENST00000636868 MKRN3Q13064 507 aaKnown RBP11.4□□□□□ -0.58
ATRX-222ENST00000636868 GOLGA2Q08379 1002 aa11.39□□□□□ -0.59
ATRX-222ENST00000636868 RNF166Q96A37 237 aaPredicted RBP11.38□□□□□ -0.59
ATRX-222ENST00000636868 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.36□□□□□ -0.591e-12■■■■□ 21.7
ATRX-222ENST00000636868 HOXB3P14651 431 aaPredicted RBP11.34□□□□□ -0.59
ATRX-222ENST00000636868 ZNF467Q7Z7K2 595 aaPredicted RBP11.3□□□□□ -0.6
ATRX-222ENST00000636868 ERBB3P21860 1342 aa11.3□□□□□ -0.6
ATRX-222ENST00000636868 HOXB1P14653 301 aaPredicted RBP11.29□□□□□ -0.6
ATRX-222ENST00000636868 DPY19L2Q6NUT2 758 aa11.28□□□□□ -0.6
ATRX-222ENST00000636868 ZNF710Q8N1W2 664 aa11.27□□□□□ -0.61
ATRX-222ENST00000636868 MYT1LQ9UL68 1186 aa11.27□□□□□ -0.61
ATRX-222ENST00000636868 ILDR1Q86SU0 546 aaPredicted RBP11.24□□□□□ -0.61
ATRX-222ENST00000636868 PSEN1P49768 467 aa11.23□□□□□ -0.61
ATRX-222ENST00000636868 VARS2Q5ST30 1063 aaKnown RBP11.22□□□□□ -0.61
ATRX-222ENST00000636868 BOLA1Q9Y3E2 137 aa11.22□□□□□ -0.61
ATRX-222ENST00000636868 G3V3G9 751 aa11.21□□□□□ -0.61
ATRX-222ENST00000636868 DOK7Q18PE1 504 aa11.21□□□□□ -0.61
ATRX-222ENST00000636868 GSE1Q14687 1217 aa11.16□□□□□ -0.62
ATRX-222ENST00000636868 CABP2Q9NPB3 220 aa11.13□□□□□ -0.63
ATRX-222ENST00000636868 RIMBP2O15034 1052 aa11.12□□□□□ -0.63
ATRX-222ENST00000636868 CHRM1P11229 460 aaPredicted RBP11.12□□□□□ -0.63
ATRX-222ENST00000636868 PDAP1Q13442 181 aaKnown RBP11.11□□□□□ -0.63
ATRX-222ENST00000636868 ZNF687Q8N1G0 1237 aa11.11□□□□□ -0.63
ATRX-222ENST00000636868 PTGER2P43116 358 aa11.08□□□□□ -0.64
ATRX-222ENST00000636868 FKBP8Q14318 412 aa11.08□□□□□ -0.64
ATRX-222ENST00000636868 KLHL34Q8N239 644 aa11.06□□□□□ -0.64
ATRX-222ENST00000636868 ANKRD13DQ6ZTN6 518 aa11.02□□□□□ -0.65
ATRX-222ENST00000636868 ZSWIM6Q9HCJ5 1215 aa11.02□□□□□ -0.65
ATRX-222ENST00000636868 GPR153Q6NV75 609 aa11.01□□□□□ -0.65
ATRX-222ENST00000636868 TMEM92Q6UXU6 159 aa11□□□□□ -0.65
ATRX-222ENST00000636868 FBXO3Q9UK99 471 aa10.99□□□□□ -0.65
ATRX-222ENST00000636868 MICALL2Q8IY33 904 aa10.94□□□□□ -0.66
ATRX-222ENST00000636868 PLA2G2EQ9NZK7 142 aa10.94□□□□□ -0.66
ATRX-222ENST00000636868 VASPP50552 380 aaPredicted RBP10.93□□□□□ -0.66
ATRX-222ENST00000636868 LSM11P83369 360 aaKnown RBP eCLIP10.93□□□□□ -0.66
ATRX-222ENST00000636868 ARSIQ5FYB1 569 aa10.92□□□□□ -0.66
ATRX-222ENST00000636868 EFCAB3Q8N7B9 438 aa10.91□□□□□ -0.66
ATRX-222ENST00000636868 ZNF316A6NFI3 1004 aaPredicted RBP10.88□□□□□ -0.67
ATRX-222ENST00000636868 KHSRPQ92945 711 aaKnown RBP eCLIP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms