RNA–Protein interactions for RNA: ENST00000636709.1

CHRNA7-219, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 7,722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-219ENST00000636709 SENP3-EIF4A1A0A087X0R7 540 aa11.89□□□□□ -0.51
CHRNA7-219ENST00000636709 HNRNPUQ00839 825 aaKnown RBP eCLIP11.88□□□□□ -0.51
CHRNA7-219ENST00000636709 MLECQ14165 292 aa11.87□□□□□ -0.51
CHRNA7-219ENST00000636709 EIF5BO60841 1220 aaKnown RBP11.86□□□□□ -0.51
CHRNA7-219ENST00000636709 LAS1LQ9Y4W2 734 aaKnown RBP11.85□□□□□ -0.51
CHRNA7-219ENST00000636709 RGL3Q3MIN7 710 aa11.85□□□□□ -0.51
CHRNA7-219ENST00000636709 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.84□□□□□ -0.51
CHRNA7-219ENST00000636709 DDX10Q13206 875 aaKnown RBP11.84□□□□□ -0.51
CHRNA7-219ENST00000636709 CLSTN1O94985 981 aa11.83□□□□□ -0.52
CHRNA7-219ENST00000636709 CSRNP3Q8WYN3 585 aa11.83□□□□□ -0.52
CHRNA7-219ENST00000636709 HIRIP3Q9BW71 556 aaPredicted RBP11.83□□□□□ -0.52
CHRNA7-219ENST00000636709 SOX12O15370 315 aa11.82□□□□□ -0.52
CHRNA7-219ENST00000636709 FKBP8Q14318 412 aa11.82□□□□□ -0.52
CHRNA7-219ENST00000636709 ISY1Q9ULR0 285 aaKnown RBP11.79□□□□□ -0.52
CHRNA7-219ENST00000636709 RRP7BPQ9NSQ0 103 aa11.79□□□□□ -0.52
CHRNA7-219ENST00000636709 GOLGA2Q08379 1002 aa11.79□□□□□ -0.52
CHRNA7-219ENST00000636709 NBR1Q14596 966 aa11.78□□□□□ -0.52
CHRNA7-219ENST00000636709 IRX6P78412 446 aaPredicted RBP11.77□□□□□ -0.53
CHRNA7-219ENST00000636709 TNNT2P45379 298 aaPredicted RBP11.76□□□□□ -0.53
CHRNA7-219ENST00000636709 ERCC6Q03468 1493 aa11.76□□□□□ -0.53
CHRNA7-219ENST00000636709 CCDC136Q96JN2 1154 aa11.75□□□□□ -0.53
CHRNA7-219ENST00000636709 MTUS2Q5JR59 1369 aa11.75□□□□□ -0.53
CHRNA7-219ENST00000636709 POGKQ9P215 609 aa11.74□□□□□ -0.53
CHRNA7-219ENST00000636709 NAP1L2Q9ULW6 460 aaPredicted RBP11.74□□□□□ -0.53
CHRNA7-219ENST00000636709 CCDC9Q9Y3X0 531 aaKnown RBP11.74□□□□□ -0.53
CHRNA7-219ENST00000636709 NEUROD2Q15784 382 aa11.74□□□□□ -0.53
CHRNA7-219ENST00000636709 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.74□□□□□ -0.53
CHRNA7-219ENST00000636709 MRS2Q9HD23 443 aa11.72□□□□□ -0.53
CHRNA7-219ENST00000636709 AMER1Q5JTC6 1135 aaPredicted RBP11.72□□□□□ -0.53
CHRNA7-219ENST00000636709 NCLP19338 710 aaKnown RBP11.71□□□□□ -0.54
CHRNA7-219ENST00000636709 OS9Q13438 667 aaPredicted RBP11.71□□□□□ -0.54
CHRNA7-219ENST00000636709 ZRSR1Q15695 479 aaKnown RBP11.71□□□□□ -0.54
CHRNA7-219ENST00000636709 PLEKHD1A6NEE1 506 aa11.7□□□□□ -0.54
CHRNA7-219ENST00000636709 ZNF330Q9Y3S2 320 aaPredicted RBP11.69□□□□□ -0.54
CHRNA7-219ENST00000636709 SAFB2Q14151 953 aaKnown RBP eCLIP11.67□□□□□ -0.54
CHRNA7-219ENST00000636709 AEBP2Q6ZN18 517 aaPredicted RBP11.66□□□□□ -0.54
CHRNA7-219ENST00000636709 PAK3O75914 559 aaPredicted RBP11.66□□□□□ -0.54
CHRNA7-219ENST00000636709 FTSJ3Q8IY81 847 aaKnown RBP11.66□□□□□ -0.54
CHRNA7-219ENST00000636709 CFAP53Q96M91 514 aa11.65□□□□□ -0.54
CHRNA7-219ENST00000636709 FGD1P98174 961 aa11.64□□□□□ -0.55
CHRNA7-219ENST00000636709 CASC1Q6TDU7 716 aa11.63□□□□□ -0.55
CHRNA7-219ENST00000636709 U2SURPO15042 1029 aaKnown RBP11.63□□□□□ -0.55
CHRNA7-219ENST00000636709 MAPK8IP3Q9UPT6 1336 aa11.62□□□□□ -0.55
CHRNA7-219ENST00000636709 PRM3Q9NNZ6 103 aa11.61□□□□□ -0.55
CHRNA7-219ENST00000636709 KNSTRNQ9Y448 316 aa11.61□□□□□ -0.55
CHRNA7-219ENST00000636709 CSB-PGBD3P0DP91 1061 aa11.6□□□□□ -0.55
CHRNA7-219ENST00000636709 KCNJ4P48050 445 aa11.6□□□□□ -0.55
CHRNA7-219ENST00000636709 PLCB2Q00722 1185 aa11.59□□□□□ -0.55
CHRNA7-219ENST00000636709 TMX4Q9H1E5 349 aaPredicted RBP11.58□□□□□ -0.55
CHRNA7-219ENST00000636709 STK26Q9P289 416 aa11.58□□□□□ -0.56
CHRNA7-219ENST00000636709 CFDP1Q9UEE9 299 aaPredicted RBP11.58□□□□□ -0.56
CHRNA7-219ENST00000636709 FRAT1Q92837 279 aaPredicted RBP11.57□□□□□ -0.56
CHRNA7-219ENST00000636709 CC2D1BQ5T0F9 858 aaKnown RBP11.57□□□□□ -0.56
CHRNA7-219ENST00000636709 PTMAP06454 111 aaKnown RBP11.57□□□□□ -0.56
CHRNA7-219ENST00000636709 SRPK2P78362 688 aaKnown RBP11.56□□□□□ -0.56
CHRNA7-219ENST00000636709 G3V3G9 751 aa11.56□□□□□ -0.56
CHRNA7-219ENST00000636709 DCAF8Q5TAQ9 597 aa11.56□□□□□ -0.56
CHRNA7-219ENST00000636709 ANO8Q9HCE9 1232 aaPredicted RBP11.55□□□□□ -0.56
CHRNA7-219ENST00000636709 PHF23Q9BUL5 403 aaPredicted RBP11.55□□□□□ -0.56
CHRNA7-219ENST00000636709 EIF4G2P78344 907 aaKnown RBP eCLIP11.55□□□□□ -0.56
CHRNA7-219ENST00000636709 CARD11Q9BXL7 1154 aa11.54□□□□□ -0.56
CHRNA7-219ENST00000636709 DNTTIP2Q5QJE6 756 aaKnown RBP11.53□□□□□ -0.56
CHRNA7-219ENST00000636709 GGT6Q6P531 493 aa11.53□□□□□ -0.56
CHRNA7-219ENST00000636709 EIF4G1Q04637 1599 aaKnown RBP11.52□□□□□ -0.56
CHRNA7-219ENST00000636709 NUDCQ9Y266 331 aa11.52□□□□□ -0.56
CHRNA7-219ENST00000636709 MSH5O43196 834 aa11.52□□□□□ -0.57
CHRNA7-219ENST00000636709 TRIM44Q96DX7 344 aaPredicted RBP11.52□□□□□ -0.57
CHRNA7-219ENST00000636709 PDE4CQ08493 712 aa11.52□□□□□ -0.57
CHRNA7-219ENST00000636709 BECN1Q14457 450 aa11.52□□□□□ -0.57
CHRNA7-219ENST00000636709 GOLGA6L22H0YM25 854 aa11.51□□□□□ -0.57
CHRNA7-219ENST00000636709 KLHL34Q8N239 644 aa11.51□□□□□ -0.57
CHRNA7-219ENST00000636709 ZCCHC6Q5VYS8 1495 aaKnown RBP11.5□□□□□ -0.57
CHRNA7-219ENST00000636709 ACIN1Q9UKV3 1341 aaKnown RBP11.5□□□□□ -0.57
CHRNA7-219ENST00000636709 APBB1O00213 710 aa11.5□□□□□ -0.57
CHRNA7-219ENST00000636709 CHMP3Q9Y3E7 222 aa11.49□□□□□ -0.57
CHRNA7-219ENST00000636709 CDCA8Q53HL2 280 aa11.48□□□□□ -0.57
CHRNA7-219ENST00000636709 HDGFP51858 240 aaKnown RBP11.48□□□□□ -0.57
CHRNA7-219ENST00000636709 MEX3CQ5U5Q3 659 aaKnown RBP11.48□□□□□ -0.57
CHRNA7-219ENST00000636709 RTF1Q92541 710 aaKnown RBP11.48□□□□□ -0.57
CHRNA7-219ENST00000636709 GNL2Q13823 731 aaKnown RBP11.47□□□□□ -0.57
CHRNA7-219ENST00000636709 RGS3P49796 1198 aa11.46□□□□□ -0.57
CHRNA7-219ENST00000636709 KRI1Q8N9T8 703 aaKnown RBP11.45□□□□□ -0.58
CHRNA7-219ENST00000636709 KANK1Q14678 1352 aa11.44□□□□□ -0.58
CHRNA7-219ENST00000636709 NUTM2DQ5VT03 806 aaPredicted RBP11.44□□□□□ -0.58
CHRNA7-219ENST00000636709 NUTM2FA1L443 756 aa11.44□□□□□ -0.58
CHRNA7-219ENST00000636709 RSF1Q96T23 1441 aaPredicted RBP11.44□□□□□ -0.58
CHRNA7-219ENST00000636709 HSP90AB1P08238 724 aaKnown RBP11.43□□□□□ -0.58
CHRNA7-219ENST00000636709 ERICH6BQ5W0A0 696 aa11.42□□□□□ -0.58
CHRNA7-219ENST00000636709 GLIPR1L2Q4G1C9 344 aa11.42□□□□□ -0.58
CHRNA7-219ENST00000636709 SPRYD3Q8NCJ5 442 aa11.42□□□□□ -0.58
CHRNA7-219ENST00000636709 TAF7LQ5H9L4 462 aa11.41□□□□□ -0.58
CHRNA7-219ENST00000636709 VPS53Q5VIR6 699 aa11.41□□□□□ -0.58
CHRNA7-219ENST00000636709 DCAF11Q8TEB1 546 aa11.41□□□□□ -0.58
CHRNA7-219ENST00000636709 GOLGA6L4A6NEF3 574 aa11.4□□□□□ -0.58
CHRNA7-219ENST00000636709 LTV1Q96GA3 475 aaPredicted RBP11.4□□□□□ -0.58
CHRNA7-219ENST00000636709 GTF2E1P29083 439 aaPredicted RBP11.4□□□□□ -0.58
CHRNA7-219ENST00000636709 GOLGA6L6A8MZA4 724 aa11.39□□□□□ -0.59
CHRNA7-219ENST00000636709 CLIP1P30622 1438 aa11.39□□□□□ -0.59
CHRNA7-219ENST00000636709 GORABQ5T7V8 394 aa11.39□□□□□ -0.59
CHRNA7-219ENST00000636709 DDRGK1Q96HY6 314 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms