RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 HNRNPUQ00839 825 aaKnown RBP eCLIP21.47■■□□□ 1.03
CLN5-208ENST00000636183 TPRNQ4KMQ1 711 aa21.47■■□□□ 1.03
CLN5-208ENST00000636183 MLECQ14165 292 aa21.46■■□□□ 1.03
CLN5-208ENST00000636183 CLSTN1O94985 981 aa21.43■■□□□ 1.02
CLN5-208ENST00000636183 RGL3Q3MIN7 710 aa21.41■■□□□ 1.02
CLN5-208ENST00000636183 DDX10Q13206 875 aaKnown RBP21.39■■□□□ 1.01
CLN5-208ENST00000636183 ISY1Q9ULR0 285 aaKnown RBP21.39■■□□□ 1.01
CLN5-208ENST00000636183 SCRIBQ14160 1630 aa21.37■■□□□ 1.01
CLN5-208ENST00000636183 GOLGA2Q08379 1002 aa21.36■■□□□ 1.01
CLN5-208ENST00000636183 LAS1LQ9Y4W2 734 aaKnown RBP21.35■■□□□ 1.01
CLN5-208ENST00000636183 FKBP8Q14318 412 aa21.33■■□□□ 1
CLN5-208ENST00000636183 CCDC9Q9Y3X0 531 aaKnown RBP21.33■■□□□ 1
CLN5-208ENST00000636183 SOX12O15370 315 aa21.32■■□□□ 1
CLN5-208ENST00000636183 MTUS2Q5JR59 1369 aa21.32■■□□□ 1
CLN5-208ENST00000636183 AEBP2Q6ZN18 517 aaPredicted RBP21.31■■□□□ 1
CLN5-208ENST00000636183 PLEKHD1A6NEE1 506 aa21.31■■□□□ 1
CLN5-208ENST00000636183 EIF5BO60841 1220 aaKnown RBP21.3■■□□□ 1
CLN5-208ENST00000636183 RRP7BPQ9NSQ0 103 aa21.3■■□□□ 1
CLN5-208ENST00000636183 POGKQ9P215 609 aa21.29■■□□□ 1
CLN5-208ENST00000636183 CCDC136Q96JN2 1154 aa21.26■□□□□ 0.99
CLN5-208ENST00000636183 SENP3-EIF4A1A0A087X0R7 540 aa21.24■□□□□ 0.99
CLN5-208ENST00000636183 HIRIP3Q9BW71 556 aaPredicted RBP21.24■□□□□ 0.99
CLN5-208ENST00000636183 MRS2Q9HD23 443 aa21.22■□□□□ 0.99
CLN5-208ENST00000636183 ERCC6Q03468 1493 aa21.22■□□□□ 0.99
CLN5-208ENST00000636183 ZRSR1Q15695 479 aaKnown RBP21.21■□□□□ 0.99
CLN5-208ENST00000636183 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.2■□□□□ 0.98
CLN5-208ENST00000636183 NAP1L2Q9ULW6 460 aaPredicted RBP21.2■□□□□ 0.98
CLN5-208ENST00000636183 NCLP19338 710 aaKnown RBP21.19■□□□□ 0.98
CLN5-208ENST00000636183 CFAP53Q96M91 514 aa21.19■□□□□ 0.98
CLN5-208ENST00000636183 TNNT2P45379 298 aaPredicted RBP21.17■□□□□ 0.98
CLN5-208ENST00000636183 NEUROD2Q15784 382 aa21.17■□□□□ 0.98
CLN5-208ENST00000636183 OS9Q13438 667 aaPredicted RBP21.17■□□□□ 0.98
CLN5-208ENST00000636183 ZNF330Q9Y3S2 320 aaPredicted RBP21.15■□□□□ 0.98
CLN5-208ENST00000636183 IRX6P78412 446 aaPredicted RBP21.12■□□□□ 0.97
CLN5-208ENST00000636183 NBR1Q14596 966 aa21.11■□□□□ 0.97
CLN5-208ENST00000636183 PRM3Q9NNZ6 103 aa21.1■□□□□ 0.97
CLN5-208ENST00000636183 TMX4Q9H1E5 349 aaPredicted RBP21.09■□□□□ 0.97
CLN5-208ENST00000636183 MAPK8IP3Q9UPT6 1336 aa21.08■□□□□ 0.97
CLN5-208ENST00000636183 FGD1P98174 961 aa21.08■□□□□ 0.97
CLN5-208ENST00000636183 CASC1Q6TDU7 716 aa21.07■□□□□ 0.96
CLN5-208ENST00000636183 FTSJ3Q8IY81 847 aaKnown RBP21.07■□□□□ 0.96
CLN5-208ENST00000636183 AMER1Q5JTC6 1135 aaPredicted RBP21.06■□□□□ 0.96
CLN5-208ENST00000636183 KNSTRNQ9Y448 316 aa21.06■□□□□ 0.96
CLN5-208ENST00000636183 PAK3O75914 559 aaPredicted RBP21.06■□□□□ 0.96
CLN5-208ENST00000636183 CSB-PGBD3P0DP91 1061 aa21.05■□□□□ 0.96
CLN5-208ENST00000636183 CFDP1Q9UEE9 299 aaPredicted RBP21.04■□□□□ 0.96
CLN5-208ENST00000636183 U2SURPO15042 1029 aaKnown RBP21.02■□□□□ 0.96
CLN5-208ENST00000636183 PHF23Q9BUL5 403 aaPredicted RBP21.02■□□□□ 0.96
CLN5-208ENST00000636183 SAFB2Q14151 953 aaKnown RBP eCLIP21.01■□□□□ 0.95
CLN5-208ENST00000636183 G3V3G9 751 aa20.99■□□□□ 0.95
CLN5-208ENST00000636183 DCAF8Q5TAQ9 597 aa20.99■□□□□ 0.95
CLN5-208ENST00000636183 KCNJ4P48050 445 aa20.99■□□□□ 0.95
CLN5-208ENST00000636183 EIF4G2P78344 907 aaKnown RBP eCLIP20.98■□□□□ 0.95
CLN5-208ENST00000636183 NUDCQ9Y266 331 aa20.98■□□□□ 0.95
CLN5-208ENST00000636183 HDGFP51858 240 aaKnown RBP20.97■□□□□ 0.95
CLN5-208ENST00000636183 CDCA8Q53HL2 280 aa20.95■□□□□ 0.94
CLN5-208ENST00000636183 KRI1Q8N9T8 703 aaKnown RBP20.93■□□□□ 0.94
CLN5-208ENST00000636183 SRPK2P78362 688 aaKnown RBP20.92■□□□□ 0.94
CLN5-208ENST00000636183 MSH5O43196 834 aa20.92■□□□□ 0.94
CLN5-208ENST00000636183 CARD11Q9BXL7 1154 aa20.92■□□□□ 0.94
CLN5-208ENST00000636183 PLCB2Q00722 1185 aa20.9■□□□□ 0.94
CLN5-208ENST00000636183 STK26Q9P289 416 aa20.9■□□□□ 0.94
CLN5-208ENST00000636183 GOLGA6L22H0YM25 854 aa20.9■□□□□ 0.94
CLN5-208ENST00000636183 KLHL34Q8N239 644 aa20.9■□□□□ 0.94
CLN5-208ENST00000636183 PTMAP06454 111 aaKnown RBP20.9■□□□□ 0.94
CLN5-208ENST00000636183 FRAT1Q92837 279 aaPredicted RBP20.89■□□□□ 0.94
CLN5-208ENST00000636183 BECN1Q14457 450 aa20.89■□□□□ 0.93
CLN5-208ENST00000636183 GGT6Q6P531 493 aa20.88■□□□□ 0.93
CLN5-208ENST00000636183 CC2D1BQ5T0F9 858 aaKnown RBP20.86■□□□□ 0.93
CLN5-208ENST00000636183 RSF1Q96T23 1441 aaPredicted RBP20.84■□□□□ 0.93
CLN5-208ENST00000636183 MEX3CQ5U5Q3 659 aaKnown RBP20.82■□□□□ 0.92
CLN5-208ENST00000636183 TRIM44Q96DX7 344 aaPredicted RBP20.82■□□□□ 0.92
CLN5-208ENST00000636183 ACIN1Q9UKV3 1341 aaKnown RBP20.82■□□□□ 0.92
CLN5-208ENST00000636183 RTF1Q92541 710 aaKnown RBP20.81■□□□□ 0.92
CLN5-208ENST00000636183 PDE4CQ08493 712 aa20.8■□□□□ 0.92
CLN5-208ENST00000636183 ANO8Q9HCE9 1232 aaPredicted RBP20.79■□□□□ 0.92
CLN5-208ENST00000636183 DNTTIP2Q5QJE6 756 aaKnown RBP20.79■□□□□ 0.92
CLN5-208ENST00000636183 KANK1Q14678 1352 aa20.79■□□□□ 0.92
CLN5-208ENST00000636183 ZCCHC6Q5VYS8 1495 aaKnown RBP20.77■□□□□ 0.92
CLN5-208ENST00000636183 DCAF8L1A6NGE4 600 aa20.76■□□□□ 0.91
CLN5-208ENST00000636183 PNNQ9H307 717 aaKnown RBP20.74■□□□□ 0.91
CLN5-208ENST00000636183 GNL2Q13823 731 aaKnown RBP20.74■□□□□ 0.91
CLN5-208ENST00000636183 CHMP3Q9Y3E7 222 aa20.74■□□□□ 0.91
CLN5-208ENST00000636183 GTF2E1P29083 439 aaPredicted RBP20.71■□□□□ 0.91
CLN5-208ENST00000636183 EIF4G1Q04637 1599 aaKnown RBP20.7■□□□□ 0.9
CLN5-208ENST00000636183 APBB1O00213 710 aa20.69■□□□□ 0.9
CLN5-208ENST00000636183 RGS3P49796 1198 aa20.68■□□□□ 0.9
CLN5-208ENST00000636183 DDRGK1Q96HY6 314 aa20.68■□□□□ 0.9
CLN5-208ENST00000636183 GLIPR1L2Q4G1C9 344 aa20.68■□□□□ 0.9
CLN5-208ENST00000636183 TAF7LQ5H9L4 462 aa20.68■□□□□ 0.9
CLN5-208ENST00000636183 CLIP1P30622 1438 aa20.67■□□□□ 0.9
CLN5-208ENST00000636183 GOLGA6L6A8MZA4 724 aa20.66■□□□□ 0.9
CLN5-208ENST00000636183 VPS53Q5VIR6 699 aa20.66■□□□□ 0.9
CLN5-208ENST00000636183 GOLGA6L4A6NEF3 574 aa20.66■□□□□ 0.9
CLN5-208ENST00000636183 HSP90AB1P08238 724 aaKnown RBP20.65■□□□□ 0.9
CLN5-208ENST00000636183 DCAF11Q8TEB1 546 aa20.65■□□□□ 0.9
CLN5-208ENST00000636183 FRAT2O75474 233 aaPredicted RBP20.64■□□□□ 0.9
CLN5-208ENST00000636183 GORABQ5T7V8 394 aa20.64■□□□□ 0.89
CLN5-208ENST00000636183 MORC1Q86VD1 984 aa20.63■□□□□ 0.89
CLN5-208ENST00000636183 NUTM2FA1L443 756 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms