RNA–Protein interactions for RNA: ENST00000636143.1

MEF2C-238, Transcript of myocyte enhancer factor 2C, human

TSL 5

Gene MEF2C, Length 2,247 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MEF2C-238	ENST00000636143	PPM1G	O15355	546 aa	Predicted RBP	14.54	□□□□□ -0.08
MEF2C-238	ENST00000636143	IRX6	P78412	446 aa	Predicted RBP	14.54	□□□□□ -0.08
MEF2C-238	ENST00000636143	GSE1	Q14687	1217 aa		14.54	□□□□□ -0.08
MEF2C-238	ENST00000636143	AAMP	Q13685	434 aa		14.53	□□□□□ -0.08
MEF2C-238	ENST00000636143	RRP9	O43818	475 aa	Known RBP	14.52	□□□□□ -0.08
MEF2C-238	ENST00000636143	PDE4C	Q08493	712 aa		14.5	□□□□□ -0.09
MEF2C-238	ENST00000636143	DDX10	Q13206	875 aa	Known RBP	14.5	□□□□□ -0.09
MEF2C-238	ENST00000636143	RBM10	P98175	930 aa	Known RBP	14.49	□□□□□ -0.09
MEF2C-238	ENST00000636143	ANP32C	O43423	234 aa		14.49	□□□□□ -0.09
MEF2C-238	ENST00000636143	B4GALNT3	Q6L9W6	998 aa		14.46	□□□□□ -0.09
MEF2C-238	ENST00000636143	HSP90AA2P	Q14568	343 aa	Predicted RBP	14.46	□□□□□ -0.1
MEF2C-238	ENST00000636143	NCAPD3	P42695	1498 aa		14.43	□□□□□ -0.1
MEF2C-238	ENST00000636143		A0A0U1RQG5	324 aa	Predicted RBP	14.42	□□□□□ -0.1
MEF2C-238	ENST00000636143	CUX2	O14529	1486 aa		14.41	□□□□□ -0.1
MEF2C-238	ENST00000636143	LAS1L	Q9Y4W2	734 aa	Known RBP	14.4	□□□□□ -0.1
MEF2C-238	ENST00000636143	PDIA4	P13667	645 aa	Known RBP	14.39	□□□□□ -0.11
MEF2C-238	ENST00000636143	HNRNPU	Q00839	825 aa	Known RBP eCLIP	14.39	□□□□□ -0.11
MEF2C-238	ENST00000636143	EIF4G1	Q04637	1599 aa	Known RBP	14.39	□□□□□ -0.11
MEF2C-238	ENST00000636143	FRAT1	Q92837	279 aa	Predicted RBP	14.38	□□□□□ -0.11
MEF2C-238	ENST00000636143	HSP90AA1	P07900	732 aa	Known RBP	14.35	□□□□□ -0.11
MEF2C-238	ENST00000636143	GOLGA3	Q08378	1498 aa		14.34	□□□□□ -0.11
MEF2C-238	ENST00000636143	VPS8	Q8N3P4	1428 aa		14.34	□□□□□ -0.11
MEF2C-238	ENST00000636143	CENPJ	Q9HC77	1338 aa	Predicted RBP	14.32	□□□□□ -0.12
MEF2C-238	ENST00000636143	WDR97	A6NE52	1622 aa		14.32	□□□□□ -0.12
MEF2C-238	ENST00000636143	CALD1	Q05682	793 aa	Known RBP	14.3	□□□□□ -0.12
MEF2C-238	ENST00000636143	NFKBIB	Q15653	356 aa		14.3	□□□□□ -0.12
MEF2C-238	ENST00000636143	DCAF11	Q8TEB1	546 aa		14.3	□□□□□ -0.12
MEF2C-238	ENST00000636143	CLIP1	P30622	1438 aa		14.29	□□□□□ -0.12
MEF2C-238	ENST00000636143	PEG3	Q9GZU2	1588 aa		14.29	□□□□□ -0.12
MEF2C-238	ENST00000636143	MAPKBP1	O60336	1514 aa		14.29	□□□□□ -0.12
MEF2C-238	ENST00000636143	RRAGD	Q9NQL2	400 aa	Predicted RBP	14.29	□□□□□ -0.12
MEF2C-238	ENST00000636143	ABCC8	Q09428	1581 aa		14.28	□□□□□ -0.12
MEF2C-238	ENST00000636143	PRDM4	Q9UKN5	801 aa		14.28	□□□□□ -0.12
MEF2C-238	ENST00000636143	SMARCA2	P51531	1590 aa		14.28	□□□□□ -0.12
MEF2C-238	ENST00000636143	CEP164	Q9UPV0	1460 aa		14.28	□□□□□ -0.12
MEF2C-238	ENST00000636143	UBTF	P17480	764 aa	Known RBP	14.26	□□□□□ -0.13
MEF2C-238	ENST00000636143	BCL11B	Q9C0K0	894 aa	Predicted RBP	14.26	□□□□□ -0.13
MEF2C-238	ENST00000636143	DDRGK1	Q96HY6	314 aa		14.25	□□□□□ -0.13
MEF2C-238	ENST00000636143	CCDC88B	A6NC98	1476 aa		14.24	□□□□□ -0.13
MEF2C-238	ENST00000636143	NAP1L5	Q96NT1	182 aa	Predicted RBP	14.24	□□□□□ -0.13
MEF2C-238	ENST00000636143	RNF123	Q5XPI4	1314 aa		14.22	□□□□□ -0.13
MEF2C-238	ENST00000636143	ZBED9	Q6R2W3	1325 aa		14.22	□□□□□ -0.13
MEF2C-238	ENST00000636143	TCERG1	O14776	1098 aa	Known RBP	14.22	□□□□□ -0.13
MEF2C-238	ENST00000636143	PNN	Q9H307	717 aa	Known RBP	14.22	□□□□□ -0.13
MEF2C-238	ENST00000636143	SOGA1	O94964	1423 aa		14.21	□□□□□ -0.13
MEF2C-238	ENST00000636143	RRBP1	Q9P2E9	1410 aa	Known RBP	14.21	□□□□□ -0.13
MEF2C-238	ENST00000636143	CLCN1	P35523	988 aa		14.21	□□□□□ -0.14
MEF2C-238	ENST00000636143	NPM2	Q86SE8	214 aa	Known RBP	14.21	□□□□□ -0.14
MEF2C-238	ENST00000636143	SCRIB	Q14160	1630 aa		14.2	□□□□□ -0.14
MEF2C-238	ENST00000636143	TAF7L	Q5H9L4	462 aa		14.19	□□□□□ -0.14
MEF2C-238	ENST00000636143	MS4A1	P11836	297 aa		14.19	□□□□□ -0.14
MEF2C-238	ENST00000636143	PDCL3	Q9H2J4	239 aa		14.19	□□□□□ -0.14
MEF2C-238	ENST00000636143	BACH2	Q9BYV9	841 aa		14.18	□□□□□ -0.14
MEF2C-238	ENST00000636143	PDE4A	P27815	886 aa		14.18	□□□□□ -0.14
MEF2C-238	ENST00000636143	UNC13A	Q9UPW8	1703 aa		14.16	□□□□□ -0.14
MEF2C-238	ENST00000636143	SMG6	Q86US8	1419 aa	Known RBP	14.15	□□□□□ -0.14
MEF2C-238	ENST00000636143	KIF21B	O75037	1637 aa		14.15	□□□□□ -0.14
MEF2C-238	ENST00000636143	SIN3A	Q96ST3	1273 aa		14.15	□□□□□ -0.14
MEF2C-238	ENST00000636143	L1TD1	Q5T7N2	865 aa	Known RBP	14.14	□□□□□ -0.15
MEF2C-238	ENST00000636143	PABPN1	Q86U42	306 aa	Known RBP eCLIP	14.14	□□□□□ -0.15
MEF2C-238	ENST00000636143	TPM2	P07951	284 aa		14.1	□□□□□ -0.15
MEF2C-238	ENST00000636143	RGS3	P49796	1198 aa		14.1	□□□□□ -0.15
MEF2C-238	ENST00000636143	BAZ1B	Q9UIG0	1483 aa	Known RBP	14.09	□□□□□ -0.15
MEF2C-238	ENST00000636143	RUSC2	Q8N2Y8	1516 aa		14.08	□□□□□ -0.16
MEF2C-238	ENST00000636143	RAB3GAP2	Q9H2M9	1393 aa		14.08	□□□□□ -0.16
MEF2C-238	ENST00000636143	AKNA	Q7Z591	1439 aa		14.06	□□□□□ -0.16
MEF2C-238	ENST00000636143	FRAT2	O75474	233 aa	Predicted RBP	14.06	□□□□□ -0.16
MEF2C-238	ENST00000636143	HIRIP3	Q9BW71	556 aa	Predicted RBP	14.05	□□□□□ -0.16
MEF2C-238	ENST00000636143	NAP1L2	Q9ULW6	460 aa	Predicted RBP	14.05	□□□□□ -0.16
MEF2C-238	ENST00000636143	CCNB3	Q8WWL7	1395 aa		14.03	□□□□□ -0.16
MEF2C-238	ENST00000636143	BBX	Q8WY36	941 aa	Predicted RBP	14.03	□□□□□ -0.16
MEF2C-238	ENST00000636143	BICRA	Q9NZM4	1560 aa		14.03	□□□□□ -0.16
MEF2C-238	ENST00000636143	NUDC	Q9Y266	331 aa		14.03	□□□□□ -0.16
MEF2C-238	ENST00000636143	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	14.02	□□□□□ -0.17
MEF2C-238	ENST00000636143	GTF2E1	P29083	439 aa	Predicted RBP	14.02	□□□□□ -0.17
MEF2C-238	ENST00000636143	ZNF326	Q5BKZ1	582 aa	Known RBP	14.01	□□□□□ -0.17
MEF2C-238	ENST00000636143	SMAP1	Q8IYB5	467 aa	Predicted RBP	14	□□□□□ -0.17
MEF2C-238	ENST00000636143	RANGAP1	P46060	587 aa	Predicted RBP	13.99	□□□□□ -0.17
MEF2C-238	ENST00000636143	RSPH4A	Q5TD94	716 aa		13.99	□□□□□ -0.17
MEF2C-238	ENST00000636143	NCOA2	Q15596	1464 aa		13.99	□□□□□ -0.17
MEF2C-238	ENST00000636143	IPO4	Q8TEX9	1081 aa	Known RBP	13.99	□□□□□ -0.17
MEF2C-238	ENST00000636143	SETD5	Q9C0A6	1442 aa		13.99	□□□□□ -0.17
MEF2C-238	ENST00000636143	MAP7D2	Q96T17	732 aa		13.98	□□□□□ -0.17
MEF2C-238	ENST00000636143	FHAD1	B1AJZ9	1412 aa		13.98	□□□□□ -0.17
MEF2C-238	ENST00000636143	NCL	P19338	710 aa	Known RBP	13.98	□□□□□ -0.17
MEF2C-238	ENST00000636143	MROH2B	Q7Z745	1585 aa		13.97	□□□□□ -0.17
MEF2C-238	ENST00000636143	CCDC184	Q52MB2	194 aa		13.97	□□□□□ -0.17
MEF2C-238	ENST00000636143	STAC3	Q96MF2	364 aa		13.97	□□□□□ -0.17
MEF2C-238	ENST00000636143	WIZ	O95785	1651 aa		13.97	□□□□□ -0.17
MEF2C-238	ENST00000636143	CANX	P27824	592 aa	Known RBP	13.96	□□□□□ -0.17
MEF2C-238	ENST00000636143	POGK	Q9P215	609 aa		13.95	□□□□□ -0.18
MEF2C-238	ENST00000636143	CNTLN	Q9NXG0	1405 aa		13.95	□□□□□ -0.18
MEF2C-238	ENST00000636143	FAM9B	Q8IZU0	186 aa		13.94	□□□□□ -0.18
MEF2C-238	ENST00000636143	FSD2	A1L4K1	749 aa		13.94	□□□□□ -0.18
MEF2C-238	ENST00000636143	XRCC6	P12956	609 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
MEF2C-238	ENST00000636143	UTP14C	Q5TAP6	766 aa	Known RBP	13.93	□□□□□ -0.18
MEF2C-238	ENST00000636143	KLHL34	Q8N239	644 aa		13.93	□□□□□ -0.18
MEF2C-238	ENST00000636143	SLC4A3	P48751	1232 aa		13.92	□□□□□ -0.18
MEF2C-238	ENST00000636143	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.92	□□□□□ -0.18
MEF2C-238	ENST00000636143	MRS2	Q9HD23	443 aa		13.92	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms