RNA–Protein interactions for RNA: ENST00000634931.1

SMARCA2-231, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5 BASIC

Gene SMARCA2, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-231	ENST00000634931	NUBP1	P53384	320 aa		12.66	□□□□□ -0.38
SMARCA2-231	ENST00000634931	HAX1	O00165	279 aa		12.65	□□□□□ -0.38
SMARCA2-231	ENST00000634931	BCAN	Q96GW7	911 aa		12.65	□□□□□ -0.38
SMARCA2-231	ENST00000634931	PRR29	P0C7W0	189 aa		12.63	□□□□□ -0.39
SMARCA2-231	ENST00000634931	KDM2A	Q9Y2K7	1162 aa		12.63	□□□□□ -0.39
SMARCA2-231	ENST00000634931	DCAF8	Q5TAQ9	597 aa		12.62	□□□□□ -0.39
SMARCA2-231	ENST00000634931	CREBZF	Q9NS37	354 aa		12.62	□□□□□ -0.39
SMARCA2-231	ENST00000634931	RNF25	Q96BH1	459 aa	Predicted RBP	12.6	□□□□□ -0.39
SMARCA2-231	ENST00000634931	HS6ST3	Q8IZP7	471 aa		12.59	□□□□□ -0.39
SMARCA2-231	ENST00000634931	TSHZ2	Q9NRE2	1034 aa		12.58	□□□□□ -0.4
SMARCA2-231	ENST00000634931	PITPNM1	O00562	1244 aa		12.57	□□□□□ -0.4
SMARCA2-231	ENST00000634931	FAM212A	Q96EL1	285 aa		12.55	□□□□□ -0.4
SMARCA2-231	ENST00000634931	MNX1	P50219	401 aa	Predicted RBP	12.54	□□□□□ -0.4
SMARCA2-231	ENST00000634931	RIOK3	O14730	519 aa	Known RBP	12.53	□□□□□ -0.4
SMARCA2-231	ENST00000634931	FXR2	P51116	673 aa	Known RBP eCLIP	12.51	□□□□□ -0.41
SMARCA2-231	ENST00000634931	TAOK2	Q9UL54	1235 aa		12.5	□□□□□ -0.41
SMARCA2-231	ENST00000634931	RASEF	Q8IZ41	740 aa		12.48	□□□□□ -0.41
SMARCA2-231	ENST00000634931	DNAJC5	Q9H3Z4	198 aa		12.46	□□□□□ -0.41
SMARCA2-231	ENST00000634931	VGF	O15240	615 aa	Predicted RBP	12.43	□□□□□ -0.42
SMARCA2-231	ENST00000634931	STK25	O00506	426 aa		12.42	□□□□□ -0.42
SMARCA2-231	ENST00000634931	CHRM1	P11229	460 aa	Predicted RBP	12.42	□□□□□ -0.42
SMARCA2-231	ENST00000634931	PRKCSH	P14314	528 aa	Predicted RBP	12.42	□□□□□ -0.42
SMARCA2-231	ENST00000634931	NKX1-1	Q15270	411 aa	Predicted RBP	12.41	□□□□□ -0.42
SMARCA2-231	ENST00000634931	PYGB	P11216	843 aa		12.38	□□□□□ -0.43
SMARCA2-231	ENST00000634931	GTPBP6	O43824	516 aa	Predicted RBP	12.35	□□□□□ -0.43
SMARCA2-231	ENST00000634931	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.33	□□□□□ -0.44
SMARCA2-231	ENST00000634931	ZFP91	Q96JP5	570 aa	Predicted RBP	12.33	□□□□□ -0.44
SMARCA2-231	ENST00000634931	STK24	Q9Y6E0	443 aa		12.33	□□□□□ -0.44
SMARCA2-231	ENST00000634931	EVX2	Q03828	476 aa		12.32	□□□□□ -0.44
SMARCA2-231	ENST00000634931	SGIP1	Q9BQI5	828 aa		12.32	□□□□□ -0.44
SMARCA2-231	ENST00000634931	BCL11B	Q9C0K0	894 aa	Predicted RBP	12.32	□□□□□ -0.44
SMARCA2-231	ENST00000634931	CHADL	Q6NUI6	762 aa		12.31	□□□□□ -0.44
SMARCA2-231	ENST00000634931	TPRN	Q4KMQ1	711 aa		12.3	□□□□□ -0.44
SMARCA2-231	ENST00000634931	PRKAR2A	P13861	404 aa	Known RBP	12.27	□□□□□ -0.45
SMARCA2-231	ENST00000634931	TSPYL2	Q9H2G4	693 aa	Predicted RBP	12.27	□□□□□ -0.45
SMARCA2-231	ENST00000634931	NBR1	Q14596	966 aa		12.24	□□□□□ -0.45
SMARCA2-231	ENST00000634931	FARP1	Q9Y4F1	1045 aa	Predicted RBP	12.23	□□□□□ -0.45
SMARCA2-231	ENST00000634931	RYDEN	Q9NUL5	291 aa	Known RBP	12.21	□□□□□ -0.45
SMARCA2-231	ENST00000634931	ZNF467	Q7Z7K2	595 aa	Predicted RBP	12.19	□□□□□ -0.46
SMARCA2-231	ENST00000634931	C19orf67	A6NJJ6	358 aa		12.14	□□□□□ -0.47
SMARCA2-231	ENST00000634931	PCDHB8	Q9UN66	801 aa		12.14	□□□□□ -0.47
SMARCA2-231	ENST00000634931	PCDHB13	Q9Y5F0	798 aa		12.14	□□□□□ -0.47
SMARCA2-231	ENST00000634931	PDAP1	Q13442	181 aa	Known RBP	12.13	□□□□□ -0.47
SMARCA2-231	ENST00000634931	CCDC61	Q9Y6R9	512 aa		12.11	□□□□□ -0.47
SMARCA2-231	ENST00000634931	GABBR2	O75899	941 aa		12.09	□□□□□ -0.47
SMARCA2-231	ENST00000634931	PSEN1	P49768	467 aa		12.07	□□□□□ -0.48
SMARCA2-231	ENST00000634931	LHX8	Q68G74	356 aa		12.07	□□□□□ -0.48
SMARCA2-231	ENST00000634931	ZNF579	Q8NAF0	562 aa	Known RBP	12.06	□□□□□ -0.48
SMARCA2-231	ENST00000634931	PAK3	O75914	559 aa	Predicted RBP	12.05	□□□□□ -0.48
SMARCA2-231	ENST00000634931	CADPS2	Q86UW7	1296 aa		12	□□□□□ -0.49
SMARCA2-231	ENST00000634931	IFNL1	Q8IU54	200 aa		11.99	□□□□□ -0.49
SMARCA2-231	ENST00000634931	MFRP	Q9BY79	579 aa		11.99	□□□□□ -0.49
SMARCA2-231	ENST00000634931	MAP3K13	O43283	966 aa		11.97	□□□□□ -0.49
SMARCA2-231	ENST00000634931	P3H3	Q8IVL6	736 aa		11.96	□□□□□ -0.49
SMARCA2-231	ENST00000634931	KIF12	Q96FN5	646 aa		11.96	□□□□□ -0.49
SMARCA2-231	ENST00000634931	WDR70	Q9NW82	654 aa		11.96	□□□□□ -0.49
SMARCA2-231	ENST00000634931	CABP2	Q9NPB3	220 aa		11.93	□□□□□ -0.5
SMARCA2-231	ENST00000634931	EFCAB3	Q8N7B9	438 aa		11.92	□□□□□ -0.5
SMARCA2-231	ENST00000634931	NISCH	Q9Y2I1	1504 aa		11.9	□□□□□ -0.5
SMARCA2-231	ENST00000634931	PPP1R37	O75864	691 aa		11.89	□□□□□ -0.51
SMARCA2-231	ENST00000634931	NLRP6	P59044	892 aa		11.89	□□□□□ -0.51
SMARCA2-231	ENST00000634931	KCNV2	Q8TDN2	545 aa		11.89	□□□□□ -0.51
SMARCA2-231	ENST00000634931	ZRANB1	Q9UGI0	708 aa		11.89	□□□□□ -0.51
SMARCA2-231	ENST00000634931	FBXO22	Q8NEZ5	403 aa		11.88	□□□□□ -0.51
SMARCA2-231	ENST00000634931	PHF8	Q9UPP1	1060 aa		11.88	□□□□□ -0.51
SMARCA2-231	ENST00000634931	SOX12	O15370	315 aa		11.87	□□□□□ -0.51
SMARCA2-231	ENST00000634931	CD44	P16070	742 aa	Known RBP	11.87	□□□□□ -0.51
SMARCA2-231	ENST00000634931	PHF12	Q96QT6	1004 aa		11.85	□□□□□ -0.51
SMARCA2-231	ENST00000634931	CLCN6	P51797	869 aa		11.78	□□□□□ -0.52
SMARCA2-231	ENST00000634931	POTEI	P0CG38	1075 aa		11.76	□□□□□ -0.53
SMARCA2-231	ENST00000634931	DCBLD2	Q96PD2	775 aa		11.76	□□□□□ -0.53
SMARCA2-231	ENST00000634931	PLSCR2	Q9NRY7	297 aa		11.76	□□□□□ -0.53
SMARCA2-231	ENST00000634931	GOLGA2	Q08379	1002 aa		11.75	□□□□□ -0.53
SMARCA2-231	ENST00000634931	TMEM106C	Q9BVX2	250 aa		11.75	□□□□□ -0.53
SMARCA2-231	ENST00000634931	E2F4	Q16254	413 aa		11.74	□□□□□ -0.53
SMARCA2-231	ENST00000634931	LMOD2	Q6P5Q4	547 aa		11.74	□□□□□ -0.53
SMARCA2-231	ENST00000634931	MS4A4A	Q96JQ5	239 aa		11.74	□□□□□ -0.53
SMARCA2-231	ENST00000634931	ARHGEF1	Q92888	912 aa	Known RBP	11.73	□□□□□ -0.53
SMARCA2-231	ENST00000634931	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
SMARCA2-231	ENST00000634931	MS4A3	Q96HJ5	214 aa		11.72	□□□□□ -0.53
SMARCA2-231	ENST00000634931	TRPC6	Q9Y210	931 aa		11.7	□□□□□ -0.54
SMARCA2-231	ENST00000634931	NCKAP5L	Q9HCH0	1330 aa		11.69	□□□□□ -0.54
SMARCA2-231	ENST00000634931	TULP1	O00294	542 aa	Predicted RBP	11.69	□□□□□ -0.54
SMARCA2-231	ENST00000634931	LARP6	Q9BRS8	491 aa	Known RBP	11.68	□□□□□ -0.54
SMARCA2-231	ENST00000634931	PDE4A	P27815	886 aa		11.67	□□□□□ -0.54
SMARCA2-231	ENST00000634931	MKRN3	Q13064	507 aa	Known RBP	11.67	□□□□□ -0.54
SMARCA2-231	ENST00000634931	MFSD10	Q14728	455 aa		11.63	□□□□□ -0.55
SMARCA2-231	ENST00000634931	CRISPLD2	Q9H0B8	497 aa		11.63	□□□□□ -0.55
SMARCA2-231	ENST00000634931	SEMA3E	O15041	775 aa		11.62	□□□□□ -0.55
SMARCA2-231	ENST00000634931	DDX27	Q96GQ7	796 aa	Known RBP	11.61	□□□□□ -0.55
SMARCA2-231	ENST00000634931	TESPA1	A2RU30	521 aa	Predicted RBP	11.6	□□□□□ -0.55
SMARCA2-231	ENST00000634931	TIE1	P35590	1138 aa		11.59	□□□□□ -0.55
SMARCA2-231	ENST00000634931	TTLL13P	A6NNM8	815 aa		11.58	□□□□□ -0.56
SMARCA2-231	ENST00000634931	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.57	□□□□□ -0.56	2e-8	■■■■□ 21
SMARCA2-231	ENST00000634931	ZC3H15	Q8WU90	426 aa	Known RBP	11.55	□□□□□ -0.56
SMARCA2-231	ENST00000634931	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.55	□□□□□ -0.56
SMARCA2-231	ENST00000634931	CAMK2B	Q13554	666 aa		11.53	□□□□□ -0.56
SMARCA2-231	ENST00000634931	SMYD5	Q6GMV2	418 aa		11.52	□□□□□ -0.57
SMARCA2-231	ENST00000634931	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.52	□□□□□ -0.57
SMARCA2-231	ENST00000634931	GALR2	O43603	387 aa	Predicted RBP	11.51	□□□□□ -0.57

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