RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 LCE2DQ5TA82 110 aaPredicted RBP9.76□□□□□ -0.85
SMARCB1-208ENST00000634926 METRNQ9UJH8 293 aa9.76□□□□□ -0.85
SMARCB1-208ENST00000634926 NPM1P06748 294 aaKnown RBP eCLIP9.73□□□□□ -0.85
SMARCB1-208ENST00000634926 EHMT2Q96KQ7 1210 aa9.7□□□□□ -0.86
SMARCB1-208ENST00000634926 POTEFA5A3E0 1075 aa9.69□□□□□ -0.86
SMARCB1-208ENST00000634926 TRPC6Q9Y210 931 aa9.69□□□□□ -0.86
SMARCB1-208ENST00000634926 ATN1P54259 1190 aaPredicted RBP9.68□□□□□ -0.86
SMARCB1-208ENST00000634926 TSPYL2Q9H2G4 693 aaPredicted RBP9.68□□□□□ -0.86
SMARCB1-208ENST00000634926 C7P10643 843 aa9.67□□□□□ -0.86
SMARCB1-208ENST00000634926 SLC39A7Q92504 469 aa9.67□□□□□ -0.86
SMARCB1-208ENST00000634926 CCDC61Q9Y6R9 512 aa9.67□□□□□ -0.86
SMARCB1-208ENST00000634926 PROM2Q8N271 834 aa9.63□□□□□ -0.87
SMARCB1-208ENST00000634926 KIF12Q96FN5 646 aa9.63□□□□□ -0.87
SMARCB1-208ENST00000634926 BMP2KQ9NSY1 1161 aaPredicted RBP9.62□□□□□ -0.87
SMARCB1-208ENST00000634926 FAM163AQ96GL9 167 aaPredicted RBP9.59□□□□□ -0.87
SMARCB1-208ENST00000634926 MAP3K13O43283 966 aa9.57□□□□□ -0.88
SMARCB1-208ENST00000634926 COLQQ9Y215 455 aaPredicted RBP9.56□□□□□ -0.88
SMARCB1-208ENST00000634926 MAMSTRQ6ZN01 415 aa9.55□□□□□ -0.88
SMARCB1-208ENST00000634926 RASEFQ8IZ41 740 aa9.55□□□□□ -0.88
SMARCB1-208ENST00000634926 PCDH10Q9P2E7 1040 aa9.53□□□□□ -0.88
SMARCB1-208ENST00000634926 SCUBE2Q9NQ36 999 aa9.5□□□□□ -0.89
SMARCB1-208ENST00000634926 TTLL13PA6NNM8 815 aa9.49□□□□□ -0.89
SMARCB1-208ENST00000634926 TIE1P35590 1138 aa9.47□□□□□ -0.89
SMARCB1-208ENST00000634926 MIER1Q8N108 512 aa9.43□□□□□ -0.9
SMARCB1-208ENST00000634926 TRIM35Q9UPQ4 493 aa9.41□□□□□ -0.9
SMARCB1-208ENST00000634926 SEC24BO95487 1268 aa9.38□□□□□ -0.91
SMARCB1-208ENST00000634926 CDAN1Q8IWY9 1227 aa9.38□□□□□ -0.91
SMARCB1-208ENST00000634926 NUBP1P53384 320 aa9.37□□□□□ -0.91
SMARCB1-208ENST00000634926 IFNL1Q8IU54 200 aa9.37□□□□□ -0.91
SMARCB1-208ENST00000634926 PCDHB13Q9Y5F0 798 aa9.36□□□□□ -0.91
SMARCB1-208ENST00000634926 ST18O60284 1047 aa9.35□□□□□ -0.91
SMARCB1-208ENST00000634926 IER5LQ5T953 404 aa9.33□□□□□ -0.92
SMARCB1-208ENST00000634926 SLAIN1Q8ND83 568 aa9.32□□□□□ -0.92
SMARCB1-208ENST00000634926 SGIP1Q9BQI5 828 aa9.31□□□□□ -0.92
SMARCB1-208ENST00000634926 TMEM106CQ9BVX2 250 aa9.29□□□□□ -0.92
SMARCB1-208ENST00000634926 IRX5P78411 483 aaPredicted RBP9.28□□□□□ -0.92
SMARCB1-208ENST00000634926 PLCD3Q8N3E9 789 aa9.28□□□□□ -0.92
SMARCB1-208ENST00000634926 PLEKHG5O94827 1062 aa9.27□□□□□ -0.93
SMARCB1-208ENST00000634926 PLCG2P16885 1265 aa9.22□□□□□ -0.93
SMARCB1-208ENST00000634926 MMRN1Q13201 1228 aa9.19□□□□□ -0.94
SMARCB1-208ENST00000634926 SPNS2Q8IVW8 549 aa9.19□□□□□ -0.94
SMARCB1-208ENST00000634926 MARVELD3Q96A59 401 aa9.18□□□□□ -0.94
SMARCB1-208ENST00000634926 PCDHB8Q9UN66 801 aa9.18□□□□□ -0.94
SMARCB1-208ENST00000634926 PYGBP11216 843 aa9.17□□□□□ -0.94
SMARCB1-208ENST00000634926 FAM212AQ96EL1 285 aa9.17□□□□□ -0.94
SMARCB1-208ENST00000634926 OCEL1Q9H607 264 aa9.17□□□□□ -0.94
SMARCB1-208ENST00000634926 POTEB3A0JP26 581 aa9.13□□□□□ -0.95
SMARCB1-208ENST00000634926 POTEBQ6S5H4 581 aa9.13□□□□□ -0.95
SMARCB1-208ENST00000634926 PDCD7Q8N8D1 485 aaKnown RBP9.12□□□□□ -0.95
SMARCB1-208ENST00000634926 ZBTB47Q9UFB7 747 aaPredicted RBP9.12□□□□□ -0.95
SMARCB1-208ENST00000634926 DCAF8Q5TAQ9 597 aa9.11□□□□□ -0.95
SMARCB1-208ENST00000634926 TMEM121BQ9BXQ6 578 aaPredicted RBP9.1□□□□□ -0.95
SMARCB1-208ENST00000634926 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.08□□□□□ -0.96
SMARCB1-208ENST00000634926 FKBP8Q14318 412 aa9.06□□□□□ -0.96
SMARCB1-208ENST00000634926 KRTAP3-3Q9BYR6 98 aa9.06□□□□□ -0.96
SMARCB1-208ENST00000634926 KRTAP3-2Q9BYR7 98 aa9.06□□□□□ -0.96
SMARCB1-208ENST00000634926 SNPHO15079 494 aa9.03□□□□□ -0.96
SMARCB1-208ENST00000634926 DPY19L2Q6NUT2 758 aa9□□□□□ -0.97
SMARCB1-208ENST00000634926 EMP3P54852 163 aa8.99□□□□□ -0.97
SMARCB1-208ENST00000634926 HS3ST6Q96QI5 342 aa8.99□□□□□ -0.97
SMARCB1-208ENST00000634926 FAM205CA6NFA0 338 aa8.97□□□□□ -0.97
SMARCB1-208ENST00000634926 C3orf67Q6ZVT6 689 aa8.96□□□□□ -0.98
SMARCB1-208ENST00000634926 ILDR1Q86SU0 546 aaPredicted RBP8.96□□□□□ -0.98
SMARCB1-208ENST00000634926 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.95□□□□□ -0.98
SMARCB1-208ENST00000634926 HOXB3P14651 431 aaPredicted RBP8.93□□□□□ -0.98
SMARCB1-208ENST00000634926 PSEN1P49768 467 aa8.93□□□□□ -0.98
SMARCB1-208ENST00000634926 MKRN3Q13064 507 aaKnown RBP8.93□□□□□ -0.98
SMARCB1-208ENST00000634926 L3MBTL3Q96JM7 780 aaPredicted RBP8.92□□□□□ -0.98
SMARCB1-208ENST00000634926 ZNF467Q7Z7K2 595 aaPredicted RBP8.91□□□□□ -0.98
SMARCB1-208ENST00000634926 CHRM1P11229 460 aaPredicted RBP8.9□□□□□ -0.98
SMARCB1-208ENST00000634926 VASPP50552 380 aaPredicted RBP8.87□□□□□ -0.99
SMARCB1-208ENST00000634926 GOLGA2Q08379 1002 aa8.87□□□□□ -0.99
SMARCB1-208ENST00000634926 GSE1Q14687 1217 aa8.87□□□□□ -0.99
SMARCB1-208ENST00000634926 KLHL34Q8N239 644 aa8.86□□□□□ -0.99
SMARCB1-208ENST00000634926 CABP2Q9NPB3 220 aa8.83□□□□□ -1
SMARCB1-208ENST00000634926 FBXO3Q9UK99 471 aa8.82□□□□□ -1
SMARCB1-208ENST00000634926 BOLA1Q9Y3E2 137 aa8.82□□□□□ -1
SMARCB1-208ENST00000634926 HOXB1P14653 301 aaPredicted RBP8.81□□□□□ -1
SMARCB1-208ENST00000634926 PDAP1Q13442 181 aaKnown RBP8.81□□□□□ -1
SMARCB1-208ENST00000634926 TMEM92Q6UXU6 159 aa8.78□□□□□ -1
SMARCB1-208ENST00000634926 IFNLR1Q8IU57 520 aaPredicted RBP8.75□□□□□ -1.01
SMARCB1-208ENST00000634926 ERBB3P21860 1342 aa8.75□□□□□ -1.01
SMARCB1-208ENST00000634926 VARS2Q5ST30 1063 aaKnown RBP8.73□□□□□ -1.01
SMARCB1-208ENST00000634926 ZNF710Q8N1W2 664 aa8.72□□□□□ -1.01
SMARCB1-208ENST00000634926 EFCAB3Q8N7B9 438 aa8.72□□□□□ -1.01
SMARCB1-208ENST00000634926 RNF166Q96A37 237 aaPredicted RBP8.71□□□□□ -1.02
SMARCB1-208ENST00000634926 CIZ1Q9ULV3 898 aaPredicted RBP8.71□□□□□ -1.02
SMARCB1-208ENST00000634926 DOK7Q18PE1 504 aa8.7□□□□□ -1.02
SMARCB1-208ENST00000634926 G3V3G9 751 aa8.68□□□□□ -1.02
SMARCB1-208ENST00000634926 GPR153Q6NV75 609 aa8.68□□□□□ -1.02
SMARCB1-208ENST00000634926 MICALL2Q8IY33 904 aa8.67□□□□□ -1.02
SMARCB1-208ENST00000634926 SPOCK2Q92563 424 aa8.67□□□□□ -1.02
SMARCB1-208ENST00000634926 MS4A4AQ96JQ5 239 aa8.66□□□□□ -1.02
SMARCB1-208ENST00000634926 MYT1LQ9UL68 1186 aa8.66□□□□□ -1.02
SMARCB1-208ENST00000634926 ZNF687Q8N1G0 1237 aa8.65□□□□□ -1.02
SMARCB1-208ENST00000634926 KHSRPQ92945 711 aaKnown RBP eCLIP8.63□□□□□ -1.03
SMARCB1-208ENST00000634926 ARSIQ5FYB1 569 aa8.6□□□□□ -1.03
SMARCB1-208ENST00000634926 RNF25Q96BH1 459 aaPredicted RBP8.59□□□□□ -1.03
SMARCB1-208ENST00000634926 RIMBP2O15034 1052 aa8.58□□□□□ -1.04
SMARCB1-208ENST00000634926 ZSWIM6Q9HCJ5 1215 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms