RNA–Protein interactions for RNA: ENST00000630828.2

TCF4-274, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-274ENST00000630828 PCDH10Q9P2E7 1040 aa9.31□□□□□ -0.92
TCF4-274ENST00000630828 ATMINO43313 823 aaPredicted RBP9.3□□□□□ -0.92
TCF4-274ENST00000630828 SPDYE4A6NLX3 237 aa9.29□□□□□ -0.92
TCF4-274ENST00000630828 MS4A3Q96HJ5 214 aa9.28□□□□□ -0.92
TCF4-274ENST00000630828 METRNQ9UJH8 293 aa9.28□□□□□ -0.92
TCF4-274ENST00000630828 PAK3O75914 559 aaPredicted RBP9.27□□□□□ -0.93
TCF4-274ENST00000630828 C7P10643 843 aa9.26□□□□□ -0.93
TCF4-274ENST00000630828 SLC39A7Q92504 469 aa9.25□□□□□ -0.93
TCF4-274ENST00000630828 NPM1P06748 294 aaKnown RBP eCLIP9.23□□□□□ -0.93
TCF4-274ENST00000630828 POTEFA5A3E0 1075 aa9.22□□□□□ -0.93
TCF4-274ENST00000630828 MAMSTRQ6ZN01 415 aa9.19□□□□□ -0.94
TCF4-274ENST00000630828 PROM2Q8N271 834 aa9.19□□□□□ -0.94
TCF4-274ENST00000630828 ATN1P54259 1190 aaPredicted RBP9.17□□□□□ -0.94
TCF4-274ENST00000630828 CCDC61Q9Y6R9 512 aa9.16□□□□□ -0.94
TCF4-274ENST00000630828 KIF12Q96FN5 646 aa9.13□□□□□ -0.95
TCF4-274ENST00000630828 FAM163AQ96GL9 167 aaPredicted RBP9.13□□□□□ -0.95
TCF4-274ENST00000630828 BMP2KQ9NSY1 1161 aaPredicted RBP9.11□□□□□ -0.95
TCF4-274ENST00000630828 FBXO3Q9UK99 471 aa9.11□□□□□ -0.95
TCF4-274ENST00000630828 TRPC6Q9Y210 931 aa9.11□□□□□ -0.95
TCF4-274ENST00000630828 SCUBE2Q9NQ36 999 aa9.08□□□□□ -0.96
TCF4-274ENST00000630828 TSPYL2Q9H2G4 693 aaPredicted RBP9.07□□□□□ -0.96
TCF4-274ENST00000630828 COLQQ9Y215 455 aaPredicted RBP9.05□□□□□ -0.96
TCF4-274ENST00000630828 TIE1P35590 1138 aa9.02□□□□□ -0.97
TCF4-274ENST00000630828 MAP3K13O43283 966 aa9.01□□□□□ -0.97
TCF4-274ENST00000630828 CDAN1Q8IWY9 1227 aa8.99□□□□□ -0.97
TCF4-274ENST00000630828 TTLL13PA6NNM8 815 aa8.98□□□□□ -0.97
TCF4-274ENST00000630828 RASEFQ8IZ41 740 aa8.96□□□□□ -0.98
TCF4-274ENST00000630828 ST18O60284 1047 aa8.92□□□□□ -0.98
TCF4-274ENST00000630828 IER5LQ5T953 404 aa8.92□□□□□ -0.98
TCF4-274ENST00000630828 VASPP50552 380 aaPredicted RBP8.91□□□□□ -0.98
TCF4-274ENST00000630828 SGIP1Q9BQI5 828 aa8.89□□□□□ -0.99
TCF4-274ENST00000630828 TRIM35Q9UPQ4 493 aa8.89□□□□□ -0.99
TCF4-274ENST00000630828 SEC24BO95487 1268 aa8.88□□□□□ -0.99
TCF4-274ENST00000630828 MMRN1Q13201 1228 aa8.84□□□□□ -0.99
TCF4-274ENST00000630828 AMER1Q5JTC6 1135 aaPredicted RBP8.84□□□□□ -0.99
TCF4-274ENST00000630828 SLAIN1Q8ND83 568 aa8.84□□□□□ -0.99
TCF4-274ENST00000630828 SPNS2Q8IVW8 549 aa8.83□□□□□ -1
TCF4-274ENST00000630828 NUBP1P53384 320 aa8.82□□□□□ -1
TCF4-274ENST00000630828 IRX5P78411 483 aaPredicted RBP8.82□□□□□ -1
TCF4-274ENST00000630828 MIER1Q8N108 512 aa8.82□□□□□ -1
TCF4-274ENST00000630828 IFNL1Q8IU54 200 aa8.81□□□□□ -1
TCF4-274ENST00000630828 IFNLR1Q8IU57 520 aaPredicted RBP8.81□□□□□ -1
TCF4-274ENST00000630828 PCDHB13Q9Y5F0 798 aa8.81□□□□□ -1
TCF4-274ENST00000630828 PLCD3Q8N3E9 789 aa8.79□□□□□ -1
TCF4-274ENST00000630828 PLEKHG5O94827 1062 aa8.78□□□□□ -1
TCF4-274ENST00000630828 TMEM121BQ9BXQ6 578 aaPredicted RBP8.76□□□□□ -1.01
TCF4-274ENST00000630828 TMEM106CQ9BVX2 250 aa8.75□□□□□ -1.01
TCF4-274ENST00000630828 ZBTB47Q9UFB7 747 aaPredicted RBP8.75□□□□□ -1.01
TCF4-274ENST00000630828 KLHL34Q8N239 644 aa8.74□□□□□ -1.01
TCF4-274ENST00000630828 RTN4Q9NQC3 1192 aaKnown RBP8.74□□□□□ -1.01
TCF4-274ENST00000630828 PLCG2P16885 1265 aa8.72□□□□□ -1.01
TCF4-274ENST00000630828 SPOCK2Q92563 424 aa8.7□□□□□ -1.02
TCF4-274ENST00000630828 OCEL1Q9H607 264 aa8.7□□□□□ -1.02
TCF4-274ENST00000630828 MARVELD3Q96A59 401 aa8.68□□□□□ -1.02
TCF4-274ENST00000630828 POTEB3A0JP26 581 aa8.67□□□□□ -1.02
TCF4-274ENST00000630828 POTEBQ6S5H4 581 aa8.67□□□□□ -1.02
TCF4-274ENST00000630828 SNPHO15079 494 aa8.65□□□□□ -1.02
TCF4-274ENST00000630828 KRTAP3-3Q9BYR6 98 aa8.65□□□□□ -1.02
TCF4-274ENST00000630828 KRTAP3-2Q9BYR7 98 aa8.65□□□□□ -1.02
TCF4-274ENST00000630828 PDCD7Q8N8D1 485 aaKnown RBP8.62□□□□□ -1.03
TCF4-274ENST00000630828 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.62□□□□□ -1.03
TCF4-274ENST00000630828 FAM212AQ96EL1 285 aa8.61□□□□□ -1.03
TCF4-274ENST00000630828 PKD2Q13563 968 aa8.57□□□□□ -1.04
TCF4-274ENST00000630828 PCDHB8Q9UN66 801 aa8.57□□□□□ -1.04
TCF4-274ENST00000630828 PYGBP11216 843 aa8.55□□□□□ -1.04
TCF4-274ENST00000630828 HS3ST6Q96QI5 342 aa8.55□□□□□ -1.04
TCF4-274ENST00000630828 EMP3P54852 163 aa8.54□□□□□ -1.04
TCF4-274ENST00000630828 GSE1Q14687 1217 aa8.54□□□□□ -1.04
TCF4-274ENST00000630828 ILDR1Q86SU0 546 aaPredicted RBP8.54□□□□□ -1.04
TCF4-274ENST00000630828 TRIM41Q8WV44 630 aa8.51□□□□□ -1.05
TCF4-274ENST00000630828 CIZ1Q9ULV3 898 aaPredicted RBP8.51□□□□□ -1.05
TCF4-274ENST00000630828 DCAF8Q5TAQ9 597 aa8.5□□□□□ -1.05
TCF4-274ENST00000630828 FAM205CA6NFA0 338 aa8.49□□□□□ -1.05
TCF4-274ENST00000630828 ECM2O94769 699 aaPredicted RBP8.48□□□□□ -1.05
TCF4-274ENST00000630828 L3MBTL3Q96JM7 780 aaPredicted RBP8.48□□□□□ -1.05
TCF4-274ENST00000630828 HOXB3P14651 431 aaPredicted RBP8.47□□□□□ -1.05
TCF4-274ENST00000630828 C3orf67Q6ZVT6 689 aa8.46□□□□□ -1.06
TCF4-274ENST00000630828 CHRM1P11229 460 aaPredicted RBP8.44□□□□□ -1.06
TCF4-274ENST00000630828 CCDC180Q9P1Z9 1646 aa8.43□□□□□ -1.06
TCF4-274ENST00000630828 DPY19L2Q6NUT2 758 aa8.42□□□□□ -1.06
TCF4-274ENST00000630828 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.42□□□□□ -1.06
TCF4-274ENST00000630828 MKRN3Q13064 507 aaKnown RBP8.41□□□□□ -1.06
TCF4-274ENST00000630828 ZNF467Q7Z7K2 595 aaPredicted RBP8.4□□□□□ -1.06
TCF4-274ENST00000630828 HOXB1P14653 301 aaPredicted RBP8.39□□□□□ -1.07
TCF4-274ENST00000630828 PSEN1P49768 467 aa8.38□□□□□ -1.07
TCF4-274ENST00000630828 RGL2O15211 777 aa8.37□□□□□ -1.07
TCF4-274ENST00000630828 TAOK2Q9UL54 1235 aa8.35□□□□□ -1.07
TCF4-274ENST00000630828 DCAF8L2P0C7V8 631 aa8.34□□□□□ -1.07
TCF4-274ENST00000630828 BOLA1Q9Y3E2 137 aa8.33□□□□□ -1.08
TCF4-274ENST00000630828 RIOK3O14730 519 aaKnown RBP8.32□□□□□ -1.08
TCF4-274ENST00000630828 GOLGA2Q08379 1002 aa8.32□□□□□ -1.08
TCF4-274ENST00000630828 RNF166Q96A37 237 aaPredicted RBP8.32□□□□□ -1.08
TCF4-274ENST00000630828 RNF25Q96BH1 459 aaPredicted RBP8.3□□□□□ -1.08
TCF4-274ENST00000630828 VGFO15240 615 aaPredicted RBP8.28□□□□□ -1.08
TCF4-274ENST00000630828 PDAP1Q13442 181 aaKnown RBP8.28□□□□□ -1.08
TCF4-274ENST00000630828 ERBB3P21860 1342 aa8.28□□□□□ -1.08
TCF4-274ENST00000630828 DOK7Q18PE1 504 aa8.26□□□□□ -1.09
TCF4-274ENST00000630828 BBXQ8WY36 941 aaPredicted RBP8.26□□□□□ -1.09
TCF4-274ENST00000630828 MYT1LQ9UL68 1186 aa8.26□□□□□ -1.09
TCF4-274ENST00000630828 VARS2Q5ST30 1063 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms