RNA–Protein interactions for RNA: ENST00000624145.3

ANKRD28-215, Transcript of ankyrin repeat domain 28, human

TSL 2 BASIC

Gene ANKRD28, Length 6,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ANKRD28-215	ENST00000624145	HAP1	P54257	671 aa	Predicted RBP	5.31	□□□□□ -1.56
ANKRD28-215	ENST00000624145	L1TD1	Q5T7N2	865 aa	Known RBP	5.3	□□□□□ -1.56
ANKRD28-215	ENST00000624145	NPHP1	O15259	732 aa		5.3	□□□□□ -1.56
ANKRD28-215	ENST00000624145	TPRN	Q4KMQ1	711 aa		5.3	□□□□□ -1.56
ANKRD28-215	ENST00000624145	P3H3	Q8IVL6	736 aa		5.3	□□□□□ -1.56
ANKRD28-215	ENST00000624145	PLEKHG5	O94827	1062 aa		5.29	□□□□□ -1.56
ANKRD28-215	ENST00000624145	NAP1L5	Q96NT1	182 aa	Predicted RBP	5.29	□□□□□ -1.56
ANKRD28-215	ENST00000624145	PLCB2	Q00722	1185 aa		5.29	□□□□□ -1.56
ANKRD28-215	ENST00000624145	ERICH6B	Q5W0A0	696 aa		5.29	□□□□□ -1.56
ANKRD28-215	ENST00000624145	PRM3	Q9NNZ6	103 aa		5.28	□□□□□ -1.56
ANKRD28-215	ENST00000624145	TAOK2	Q9UL54	1235 aa		5.28	□□□□□ -1.56
ANKRD28-215	ENST00000624145	CHAF1A	Q13111	956 aa	Predicted RBP	5.27	□□□□□ -1.57
ANKRD28-215	ENST00000624145	FGD1	P98174	961 aa		5.27	□□□□□ -1.57
ANKRD28-215	ENST00000624145	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	5.27	□□□□□ -1.57
ANKRD28-215	ENST00000624145	PPP1R15A	O75807	674 aa	Predicted RBP	5.27	□□□□□ -1.57
ANKRD28-215	ENST00000624145	PNN	Q9H307	717 aa	Known RBP	5.26	□□□□□ -1.57
ANKRD28-215	ENST00000624145	MRS2	Q9HD23	443 aa		5.26	□□□□□ -1.57
ANKRD28-215	ENST00000624145	GOLGA2	Q08379	1002 aa		5.26	□□□□□ -1.57
ANKRD28-215	ENST00000624145	KIAA2012	Q0VF49	1180 aa		5.26	□□□□□ -1.57
ANKRD28-215	ENST00000624145	DDX10	Q13206	875 aa	Known RBP	5.25	□□□□□ -1.57
ANKRD28-215	ENST00000624145	NAP1L2	Q9ULW6	460 aa	Predicted RBP	5.25	□□□□□ -1.57
ANKRD28-215	ENST00000624145	CFAP53	Q96M91	514 aa		5.25	□□□□□ -1.57
ANKRD28-215	ENST00000624145	AMER1	Q5JTC6	1135 aa	Predicted RBP	5.25	□□□□□ -1.57
ANKRD28-215	ENST00000624145	FTSJ3	Q8IY81	847 aa	Known RBP	5.25	□□□□□ -1.57
ANKRD28-215	ENST00000624145	NOC3L	Q8WTT2	800 aa	Known RBP	5.25	□□□□□ -1.57
ANKRD28-215	ENST00000624145	GOLGA6L4	A6NEF3	574 aa		5.24	□□□□□ -1.57
ANKRD28-215	ENST00000624145	PPM1G	O15355	546 aa	Predicted RBP	5.24	□□□□□ -1.57
ANKRD28-215	ENST00000624145	KCNJ4	P48050	445 aa		5.24	□□□□□ -1.57
ANKRD28-215	ENST00000624145	OS9	Q13438	667 aa	Predicted RBP	5.24	□□□□□ -1.57
ANKRD28-215	ENST00000624145	ISY1	Q9ULR0	285 aa	Known RBP	5.23	□□□□□ -1.57
ANKRD28-215	ENST00000624145	KDM2A	Q9Y2K7	1162 aa		5.23	□□□□□ -1.57
ANKRD28-215	ENST00000624145	HSP90AB1	P08238	724 aa	Known RBP	5.23	□□□□□ -1.57
ANKRD28-215	ENST00000624145	IRX6	P78412	446 aa	Predicted RBP	5.22	□□□□□ -1.57
ANKRD28-215	ENST00000624145	DRC7	Q8IY82	874 aa		5.22	□□□□□ -1.57
ANKRD28-215	ENST00000624145	CHMP4B	Q9H444	224 aa	Known RBP	5.22	□□□□□ -1.57
ANKRD28-215	ENST00000624145	TSPY4	P0CV99	314 aa		5.21	□□□□□ -1.57
ANKRD28-215	ENST00000624145	TSPY10	P0CW01	314 aa		5.21	□□□□□ -1.57
ANKRD28-215	ENST00000624145	MSN	P26038	577 aa	Known RBP	5.21	□□□□□ -1.57
ANKRD28-215	ENST00000624145	EIF4G2	P78344	907 aa	Known RBP eCLIP	5.21	□□□□□ -1.58	6e-8	■■■■■ 27.4
ANKRD28-215	ENST00000624145	PABPN1	Q86U42	306 aa	Known RBP eCLIP	5.21	□□□□□ -1.58
ANKRD28-215	ENST00000624145	MAPK8IP3	Q9UPT6	1336 aa		5.21	□□□□□ -1.58
ANKRD28-215	ENST00000624145		A0A0U1RQG5	324 aa	Predicted RBP	5.21	□□□□□ -1.58
ANKRD28-215	ENST00000624145	GNL2	Q13823	731 aa	Known RBP	5.2	□□□□□ -1.58
ANKRD28-215	ENST00000624145	LAS1L	Q9Y4W2	734 aa	Known RBP	5.2	□□□□□ -1.58
ANKRD28-215	ENST00000624145	TNNT3	P45378	269 aa	Predicted RBP	5.2	□□□□□ -1.58
ANKRD28-215	ENST00000624145	MCC	P23508	829 aa		5.19	□□□□□ -1.58
ANKRD28-215	ENST00000624145	CHIC2	Q9UKJ5	165 aa		5.19	□□□□□ -1.58
ANKRD28-215	ENST00000624145	SENP3	Q9H4L4	574 aa	Predicted RBP	5.19	□□□□□ -1.58
ANKRD28-215	ENST00000624145	CDCA8	Q53HL2	280 aa		5.19	□□□□□ -1.58
ANKRD28-215	ENST00000624145	LMOD2	Q6P5Q4	547 aa		5.19	□□□□□ -1.58
ANKRD28-215	ENST00000624145	MS4A1	P11836	297 aa		5.18	□□□□□ -1.58
ANKRD28-215	ENST00000624145	GOLGA6L1	Q8N7Z2	621 aa		5.18	□□□□□ -1.58
ANKRD28-215	ENST00000624145	KRI1	Q8N9T8	703 aa	Known RBP	5.18	□□□□□ -1.58
ANKRD28-215	ENST00000624145	NUDC	Q9Y266	331 aa		5.18	□□□□□ -1.58
ANKRD28-215	ENST00000624145	HSCB	Q8IWL3	235 aa		5.18	□□□□□ -1.58
ANKRD28-215	ENST00000624145	RTN4	Q9NQC3	1192 aa	Known RBP	5.18	□□□□□ -1.58
ANKRD28-215	ENST00000624145	USP35	Q9P2H5	1018 aa		5.18	□□□□□ -1.58
ANKRD28-215	ENST00000624145	KNSTRN	Q9Y448	316 aa		5.17	□□□□□ -1.58
ANKRD28-215	ENST00000624145	ARID4B	Q4LE39	1312 aa	Predicted RBP	5.17	□□□□□ -1.58
ANKRD28-215	ENST00000624145	CSRNP3	Q8WYN3	585 aa		5.17	□□□□□ -1.58
ANKRD28-215	ENST00000624145	CFAP44	Q96MT7	982 aa		5.17	□□□□□ -1.58
ANKRD28-215	ENST00000624145	TPM4	P67936	248 aa		5.16	□□□□□ -1.58
ANKRD28-215	ENST00000624145	PDE4C	Q08493	712 aa		5.16	□□□□□ -1.58
ANKRD28-215	ENST00000624145	CEP89	Q96ST8	783 aa		5.16	□□□□□ -1.58
ANKRD28-215	ENST00000624145	HTATSF1	O43719	755 aa	Known RBP	5.16	□□□□□ -1.58
ANKRD28-215	ENST00000624145	TMX4	Q9H1E5	349 aa	Predicted RBP	5.16	□□□□□ -1.58
ANKRD28-215	ENST00000624145	CALR	P27797	417 aa	Known RBP	5.16	□□□□□ -1.58
ANKRD28-215	ENST00000624145	RGS3	P49796	1198 aa		5.16	□□□□□ -1.58
ANKRD28-215	ENST00000624145	NEUROD2	Q15784	382 aa		5.15	□□□□□ -1.59
ANKRD28-215	ENST00000624145	FRAT1	Q92837	279 aa	Predicted RBP	5.15	□□□□□ -1.59
ANKRD28-215	ENST00000624145	CCDC34	Q96HJ3	373 aa		5.15	□□□□□ -1.59
ANKRD28-215	ENST00000624145	SET	Q01105	290 aa	Predicted RBP	5.15	□□□□□ -1.59
ANKRD28-215	ENST00000624145	PTMS	P20962	102 aa		5.14	□□□□□ -1.59
ANKRD28-215	ENST00000624145	NOP58	Q9Y2X3	529 aa	Known RBP	5.14	□□□□□ -1.59
ANKRD28-215	ENST00000624145	POGK	Q9P215	609 aa		5.14	□□□□□ -1.59
ANKRD28-215	ENST00000624145	MTUS2	Q5JR59	1369 aa		5.13	□□□□□ -1.59
ANKRD28-215	ENST00000624145	KIAA1211	Q6ZU35	1233 aa		5.13	□□□□□ -1.59
ANKRD28-215	ENST00000624145	TPM3	P06753	285 aa		5.12	□□□□□ -1.59
ANKRD28-215	ENST00000624145	RASSF8	Q8NHQ8	419 aa		5.12	□□□□□ -1.59
ANKRD28-215	ENST00000624145	SYAP1	Q96A49	352 aa	Predicted RBP	5.12	□□□□□ -1.59
ANKRD28-215	ENST00000624145	U2SURP	O15042	1029 aa	Known RBP	5.12	□□□□□ -1.59
ANKRD28-215	ENST00000624145	HSP90B1	P14625	803 aa	Known RBP	5.11	□□□□□ -1.59
ANKRD28-215	ENST00000624145	RGL3	Q3MIN7	710 aa		5.11	□□□□□ -1.59
ANKRD28-215	ENST00000624145	GBP4	Q96PP9	640 aa		5.11	□□□□□ -1.59
ANKRD28-215	ENST00000624145	ARID3A	Q99856	593 aa		5.11	□□□□□ -1.59
ANKRD28-215	ENST00000624145	FBXO3	Q9UK99	471 aa		5.1	□□□□□ -1.59
ANKRD28-215	ENST00000624145	HIRIP3	Q9BW71	556 aa	Predicted RBP	5.1	□□□□□ -1.59
ANKRD28-215	ENST00000624145	ABCC9	O60706	1549 aa		5.1	□□□□□ -1.59
ANKRD28-215	ENST00000624145	PPP4R2	Q9NY27	417 aa		5.1	□□□□□ -1.59
ANKRD28-215	ENST00000624145		G3V3G9	751 aa		5.1	□□□□□ -1.59
ANKRD28-215	ENST00000624145	DCAF8	Q5TAQ9	597 aa		5.1	□□□□□ -1.59
ANKRD28-215	ENST00000624145	SPRYD3	Q8NCJ5	442 aa		5.1	□□□□□ -1.59
ANKRD28-215	ENST00000624145	RTF1	Q92541	710 aa	Known RBP	5.1	□□□□□ -1.59
ANKRD28-215	ENST00000624145	KCNH8	Q96L42	1107 aa		5.09	□□□□□ -1.59
ANKRD28-215	ENST00000624145	VPS53	Q5VIR6	699 aa		5.09	□□□□□ -1.59
ANKRD28-215	ENST00000624145	CHMP7	Q8WUX9	453 aa	Predicted RBP	5.09	□□□□□ -1.59
ANKRD28-215	ENST00000624145	CSPP1	Q1MSJ5	1256 aa		5.09	□□□□□ -1.59
ANKRD28-215	ENST00000624145	CARD11	Q9BXL7	1154 aa		5.09	□□□□□ -1.59
ANKRD28-215	ENST00000624145	MARCH6	O60337	910 aa		5.09	□□□□□ -1.59
ANKRD28-215	ENST00000624145	CREBRF	Q8IUR6	639 aa		5.09	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms