RNA–Protein interactions for RNA: ENST00000621973.1

DDX1-208, Transcript of DEAD-box helicase 1, humanhuman

TSL 5 BASIC

Gene DDX1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-208ENST00000621973 MIER1Q8N108 512 aa10.67□□□□□ -0.7
DDX1-208ENST00000621973 ABCB7O75027 752 aa10.66□□□□□ -0.7
DDX1-208ENST00000621973 RNF39Q9H2S5 420 aa10.66□□□□□ -0.7
DDX1-208ENST00000621973 CIZ1Q9ULV3 898 aaPredicted RBP10.63□□□□□ -0.71
DDX1-208ENST00000621973 SSUH2Q9Y2M2 353 aa10.63□□□□□ -0.71
DDX1-208ENST00000621973 BRPF1P55201 1214 aaPredicted RBP10.6□□□□□ -0.71
DDX1-208ENST00000621973 HS6ST3Q8IZP7 471 aa10.6□□□□□ -0.71
DDX1-208ENST00000621973 SPDYE2BA6NHP3 402 aa10.59□□□□□ -0.71
DDX1-208ENST00000621973 SPDYE6P0CI01 402 aa10.59□□□□□ -0.71
DDX1-208ENST00000621973 SPDYE2Q495Y8 402 aa10.59□□□□□ -0.71
DDX1-208ENST00000621973 ZCCHC6Q5VYS8 1495 aaKnown RBP10.59□□□□□ -0.71
DDX1-208ENST00000621973 TTBK1Q5TCY1 1321 aaPredicted RBP10.58□□□□□ -0.72
DDX1-208ENST00000621973 PABPN1Q86U42 306 aaKnown RBP eCLIP10.58□□□□□ -0.72
DDX1-208ENST00000621973 ZBTB47Q9UFB7 747 aaPredicted RBP10.57□□□□□ -0.72
DDX1-208ENST00000621973 TRIM41Q8WV44 630 aa10.56□□□□□ -0.72
DDX1-208ENST00000621973 OSCARQ8IYS5 282 aa10.56□□□□□ -0.72
DDX1-208ENST00000621973 C1QBPQ07021 282 aaKnown RBP10.55□□□□□ -0.72
DDX1-208ENST00000621973 PLEKHG5O94827 1062 aa10.52□□□□□ -0.73
DDX1-208ENST00000621973 SHROOM4Q9ULL8 1493 aa10.51□□□□□ -0.73
DDX1-208ENST00000621973 RNF25Q96BH1 459 aaPredicted RBP10.5□□□□□ -0.73
DDX1-208ENST00000621973 LOC105371045A0A1W2PR82 267 aa10.49□□□□□ -0.73
DDX1-208ENST00000621973 NKX1-1Q15270 411 aaPredicted RBP10.47□□□□□ -0.73
DDX1-208ENST00000621973 MYT1Q01538 1121 aa10.46□□□□□ -0.73
DDX1-208ENST00000621973 GTPBP6O43824 516 aaPredicted RBP10.43□□□□□ -0.74
DDX1-208ENST00000621973 DSG3P32926 999 aa10.43□□□□□ -0.74
DDX1-208ENST00000621973 ARID3AQ99856 593 aa10.42□□□□□ -0.74
DDX1-208ENST00000621973 GSE1Q14687 1217 aa10.41□□□□□ -0.74
DDX1-208ENST00000621973 RIOK3O14730 519 aaKnown RBP10.38□□□□□ -0.75
DDX1-208ENST00000621973 NEUROD2Q15784 382 aa10.37□□□□□ -0.75
DDX1-208ENST00000621973 C1orf115Q9H7X2 142 aa10.37□□□□□ -0.75
DDX1-208ENST00000621973 CCDC9Q9Y3X0 531 aaKnown RBP10.36□□□□□ -0.75
DDX1-208ENST00000621973 LMOD2Q6P5Q4 547 aa10.36□□□□□ -0.75
DDX1-208ENST00000621973 DCAF1Q9Y4B6 1507 aa10.35□□□□□ -0.75
DDX1-208ENST00000621973 NUBP1P53384 320 aa10.34□□□□□ -0.75
DDX1-208ENST00000621973 ZMYND15Q9H091 742 aa10.34□□□□□ -0.75
DDX1-208ENST00000621973 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.33□□□□□ -0.76
DDX1-208ENST00000621973 STK25O00506 426 aa10.32□□□□□ -0.76
DDX1-208ENST00000621973 EIF5BO60841 1220 aaKnown RBP10.32□□□□□ -0.76
DDX1-208ENST00000621973 NECTIN2Q92692 538 aa10.32□□□□□ -0.76
DDX1-208ENST00000621973 RSPH6AQ9H0K4 717 aa10.31□□□□□ -0.76
DDX1-208ENST00000621973 VGFO15240 615 aaPredicted RBP10.28□□□□□ -0.76
DDX1-208ENST00000621973 DCAF8Q5TAQ9 597 aa10.28□□□□□ -0.76
DDX1-208ENST00000621973 ZBTB7CA1YPR0 619 aa10.25□□□□□ -0.77
DDX1-208ENST00000621973 IGSF3O75054 1194 aa10.25□□□□□ -0.77
DDX1-208ENST00000621973 P3H3Q8IVL6 736 aa10.24□□□□□ -0.77
DDX1-208ENST00000621973 RYDENQ9NUL5 291 aaKnown RBP10.24□□□□□ -0.77
DDX1-208ENST00000621973 SGIP1Q9BQI5 828 aa10.22□□□□□ -0.77
DDX1-208ENST00000621973 FAM212AQ96EL1 285 aa10.22□□□□□ -0.77
DDX1-208ENST00000621973 SLC24A3Q9HC58 644 aa10.22□□□□□ -0.77
DDX1-208ENST00000621973 BCL11BQ9C0K0 894 aaPredicted RBP10.21□□□□□ -0.77
DDX1-208ENST00000621973 ARID3CA6NKF2 412 aa10.21□□□□□ -0.78
DDX1-208ENST00000621973 CHRM1P11229 460 aaPredicted RBP10.21□□□□□ -0.78
DDX1-208ENST00000621973 STK24Q9Y6E0 443 aa10.2□□□□□ -0.78
DDX1-208ENST00000621973 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.19□□□□□ -0.78
DDX1-208ENST00000621973 PDIA4P13667 645 aaKnown RBP10.19□□□□□ -0.78
DDX1-208ENST00000621973 ZFP91Q96JP5 570 aaPredicted RBP10.19□□□□□ -0.78
DDX1-208ENST00000621973 ZC3H15Q8WU90 426 aaKnown RBP10.18□□□□□ -0.78
DDX1-208ENST00000621973 MNX1P50219 401 aaPredicted RBP10.15□□□□□ -0.79
DDX1-208ENST00000621973 KCNV2Q8TDN2 545 aa10.15□□□□□ -0.79
DDX1-208ENST00000621973 RASEFQ8IZ41 740 aa10.11□□□□□ -0.79
DDX1-208ENST00000621973 CREBZFQ9NS37 354 aa10.11□□□□□ -0.79
DDX1-208ENST00000621973 APBB1O00213 710 aa10.09□□□□□ -0.79
DDX1-208ENST00000621973 MYO15BQ96JP2 1530 aa10.09□□□□□ -0.79
DDX1-208ENST00000621973 CADPS2Q86UW7 1296 aa10.09□□□□□ -0.79
DDX1-208ENST00000621973 WDR70Q9NW82 654 aa10.09□□□□□ -0.79
DDX1-208ENST00000621973 PYGBP11216 843 aa10.07□□□□□ -0.8
DDX1-208ENST00000621973 SPDYE1Q8NFV5 336 aaPredicted RBP10.07□□□□□ -0.8
DDX1-208ENST00000621973 KCTD17Q8N5Z5 321 aa10.07□□□□□ -0.8
DDX1-208ENST00000621973 GPBP1L1Q9HC44 474 aaPredicted RBP10.03□□□□□ -0.8
DDX1-208ENST00000621973 RAD21O60216 631 aa10.02□□□□□ -0.81
DDX1-208ENST00000621973 PRR29P0C7W0 189 aa10.02□□□□□ -0.81
DDX1-208ENST00000621973 MKRN3Q13064 507 aaKnown RBP10.01□□□□□ -0.81
DDX1-208ENST00000621973 RGS22Q8NE09 1264 aa10.01□□□□□ -0.81
DDX1-208ENST00000621973 ZNF428Q96B54 188 aa10.01□□□□□ -0.81
DDX1-208ENST00000621973 IL27Q8NEV9 243 aa10□□□□□ -0.81
DDX1-208ENST00000621973 CLEC11AQ9Y240 323 aa9.99□□□□□ -0.81
DDX1-208ENST00000621973 CDK11BP21127 795 aaKnown RBP9.97□□□□□ -0.81
DDX1-208ENST00000621973 CDK11AQ9UQ88 783 aaPredicted RBP9.97□□□□□ -0.81
DDX1-208ENST00000621973 CCDC82Q8N4S0 544 aa9.97□□□□□ -0.81
DDX1-208ENST00000621973 ARHGEF1Q92888 912 aaKnown RBP9.97□□□□□ -0.81
DDX1-208ENST00000621973 MTMR7Q9Y216 660 aa9.97□□□□□ -0.81
DDX1-208ENST00000621973 ABCC9O60706 1549 aa9.96□□□□□ -0.81
DDX1-208ENST00000621973 SCRIBQ14160 1630 aa9.94□□□□□ -0.82
DDX1-208ENST00000621973 ZMYND10O75800 440 aa9.94□□□□□ -0.82
DDX1-208ENST00000621973 AKT1S1Q96B36 256 aa9.94□□□□□ -0.82
DDX1-208ENST00000621973 NACADO15069 1562 aa9.93□□□□□ -0.82
DDX1-208ENST00000621973 ZNF467Q7Z7K2 595 aaPredicted RBP9.92□□□□□ -0.82
DDX1-208ENST00000621973 FOXD4L5Q5VV16 416 aaPredicted RBP9.92□□□□□ -0.82
DDX1-208ENST00000621973 FOXD4L4Q8WXT5 416 aaPredicted RBP9.92□□□□□ -0.82
DDX1-208ENST00000621973 MFRPQ9BY79 579 aa9.92□□□□□ -0.82
DDX1-208ENST00000621973 CHMP4AQ9BY43 222 aa9.91□□□□□ -0.82
DDX1-208ENST00000621973 HSP90B1P14625 803 aaKnown RBP9.91□□□□□ -0.82
DDX1-208ENST00000621973 TESPA1A2RU30 521 aaPredicted RBP9.9□□□□□ -0.82
DDX1-208ENST00000621973 PDAP1Q13442 181 aaKnown RBP9.9□□□□□ -0.82
DDX1-208ENST00000621973 SEMA3EO15041 775 aa9.9□□□□□ -0.83
DDX1-208ENST00000621973 E2F4Q16254 413 aa9.9□□□□□ -0.83
DDX1-208ENST00000621973 RBM25P49756 843 aaKnown RBP9.88□□□□□ -0.83
DDX1-208ENST00000621973 RSF1Q96T23 1441 aaPredicted RBP9.88□□□□□ -0.83
DDX1-208ENST00000621973 AEBP1Q8IUX7 1158 aa9.87□□□□□ -0.83
DDX1-208ENST00000621973 RBM42Q9BTD8 480 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms