RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 GOLGA6L22H0YM25 854 aa9.57□□□□□ -0.88
COLCA1-205ENST00000620864 RTN4Q9NQC3 1192 aaKnown RBP9.57□□□□□ -0.88
COLCA1-205ENST00000620864 KCNH8Q96L42 1107 aa9.56□□□□□ -0.88
COLCA1-205ENST00000620864 NBR1Q14596 966 aa9.56□□□□□ -0.88
COLCA1-205ENST00000620864 NPHP1O15259 732 aa9.55□□□□□ -0.88
COLCA1-205ENST00000620864 MAP3K9P80192 1104 aa9.55□□□□□ -0.88
COLCA1-205ENST00000620864 PPP1R1BQ9UD71 204 aaPredicted RBP9.54□□□□□ -0.88
COLCA1-205ENST00000620864 CCDC9Q9Y3X0 531 aaKnown RBP9.52□□□□□ -0.89
COLCA1-205ENST00000620864 FKBP8Q14318 412 aa9.51□□□□□ -0.89
COLCA1-205ENST00000620864 PPM1GO15355 546 aaPredicted RBP9.51□□□□□ -0.89
COLCA1-205ENST00000620864 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.5□□□□□ -0.89
COLCA1-205ENST00000620864 PRKCSHP14314 528 aaPredicted RBP9.5□□□□□ -0.89
COLCA1-205ENST00000620864 NEUROD1Q13562 356 aa9.5□□□□□ -0.89
COLCA1-205ENST00000620864 CCDC136Q96JN2 1154 aa9.49□□□□□ -0.89
COLCA1-205ENST00000620864 PODXL2Q9NZ53 605 aa9.48□□□□□ -0.89
COLCA1-205ENST00000620864 GOLGA6L6A8MZA4 724 aa9.47□□□□□ -0.89
COLCA1-205ENST00000620864 ZBTB7CA1YPR0 619 aa9.47□□□□□ -0.89
COLCA1-205ENST00000620864 NRDCO43847 1150 aa9.46□□□□□ -0.9
COLCA1-205ENST00000620864 A0A0U1RQG5 324 aaPredicted RBP9.45□□□□□ -0.9
COLCA1-205ENST00000620864 ARXQ96QS3 562 aa9.45□□□□□ -0.9
COLCA1-205ENST00000620864 ZRSR1Q15695 479 aaKnown RBP9.45□□□□□ -0.9
COLCA1-205ENST00000620864 PTMAP06454 111 aaKnown RBP9.44□□□□□ -0.9
COLCA1-205ENST00000620864 MYH16Q9H6N6 1097 aa9.44□□□□□ -0.9
COLCA1-205ENST00000620864 CHAF1AQ13111 956 aaPredicted RBP9.43□□□□□ -0.9
COLCA1-205ENST00000620864 LOC105371045A0A1W2PR82 267 aa9.43□□□□□ -0.9
COLCA1-205ENST00000620864 L1TD1Q5T7N2 865 aaKnown RBP9.43□□□□□ -0.9
COLCA1-205ENST00000620864 DNTTIP2Q5QJE6 756 aaKnown RBP9.43□□□□□ -0.9
COLCA1-205ENST00000620864 NEUROD2Q15784 382 aa9.42□□□□□ -0.9
COLCA1-205ENST00000620864 NAP1L5Q96NT1 182 aaPredicted RBP9.42□□□□□ -0.9
COLCA1-205ENST00000620864 PPP1R15AO75807 674 aaPredicted RBP9.42□□□□□ -0.9
COLCA1-205ENST00000620864 MLECQ14165 292 aa9.42□□□□□ -0.9
COLCA1-205ENST00000620864 CCDC180Q9P1Z9 1646 aa9.4□□□□□ -0.9
COLCA1-205ENST00000620864 HNRNPUQ00839 825 aaKnown RBP eCLIP9.4□□□□□ -0.9
COLCA1-205ENST00000620864 TULP1O00294 542 aaPredicted RBP9.38□□□□□ -0.91
COLCA1-205ENST00000620864 CASC1Q6TDU7 716 aa9.37□□□□□ -0.91
COLCA1-205ENST00000620864 C16orf71Q8IYS4 520 aaPredicted RBP9.37□□□□□ -0.91
COLCA1-205ENST00000620864 TONSLQ96HA7 1378 aa9.36□□□□□ -0.91
COLCA1-205ENST00000620864 PTMSP20962 102 aa9.36□□□□□ -0.91
COLCA1-205ENST00000620864 USP35Q9P2H5 1018 aa9.36□□□□□ -0.91
COLCA1-205ENST00000620864 BAZ1BQ9UIG0 1483 aaKnown RBP9.34□□□□□ -0.91
COLCA1-205ENST00000620864 NACADO15069 1562 aa9.34□□□□□ -0.91
COLCA1-205ENST00000620864 ADRA2BP18089 450 aa9.32□□□□□ -0.92
COLCA1-205ENST00000620864 TMC1Q8TDI8 760 aa9.32□□□□□ -0.92
COLCA1-205ENST00000620864 WDR43Q15061 677 aaKnown RBP eCLIP9.32□□□□□ -0.92
COLCA1-205ENST00000620864 MSNP26038 577 aaKnown RBP9.32□□□□□ -0.92
COLCA1-205ENST00000620864 NCBP3Q53F19 620 aaKnown RBP9.32□□□□□ -0.92
COLCA1-205ENST00000620864 CECR2Q9BXF3 1484 aa9.31□□□□□ -0.92
COLCA1-205ENST00000620864 DCAF1Q9Y4B6 1507 aa9.31□□□□□ -0.92
COLCA1-205ENST00000620864 CHMP4BQ9H444 224 aaKnown RBP9.31□□□□□ -0.92
COLCA1-205ENST00000620864 LMOD2Q6P5Q4 547 aa9.31□□□□□ -0.92
COLCA1-205ENST00000620864 CYB5RLQ6IPT4 315 aa9.3□□□□□ -0.92
COLCA1-205ENST00000620864 PLEKHD1A6NEE1 506 aa9.3□□□□□ -0.92
COLCA1-205ENST00000620864 TSPY4P0CV99 314 aa9.3□□□□□ -0.92
COLCA1-205ENST00000620864 TSPY10P0CW01 314 aa9.3□□□□□ -0.92
COLCA1-205ENST00000620864 TNNT3P45378 269 aaPredicted RBP9.3□□□□□ -0.92
COLCA1-205ENST00000620864 MSH5O43196 834 aa9.29□□□□□ -0.92
COLCA1-205ENST00000620864 PIP4K2BP78356 416 aa9.29□□□□□ -0.92
COLCA1-205ENST00000620864 DISP3Q9P2K9 1392 aa9.29□□□□□ -0.92
COLCA1-205ENST00000620864 NOP58Q9Y2X3 529 aaKnown RBP9.28□□□□□ -0.92
COLCA1-205ENST00000620864 CAPN15O75808 1086 aa9.28□□□□□ -0.92
COLCA1-205ENST00000620864 TMX4Q9H1E5 349 aaPredicted RBP9.28□□□□□ -0.92
COLCA1-205ENST00000620864 CHIC2Q9UKJ5 165 aa9.28□□□□□ -0.92
COLCA1-205ENST00000620864 CSRNP3Q8WYN3 585 aa9.27□□□□□ -0.92
COLCA1-205ENST00000620864 PAXIP1Q6ZW49 1069 aaPredicted RBP9.26□□□□□ -0.93
COLCA1-205ENST00000620864 FAM9BQ8IZU0 186 aa9.26□□□□□ -0.93
COLCA1-205ENST00000620864 CALRP27797 417 aaKnown RBP9.25□□□□□ -0.93
COLCA1-205ENST00000620864 PKNOX2Q96KN3 472 aa9.24□□□□□ -0.93
COLCA1-205ENST00000620864 IL27Q8NEV9 243 aa9.23□□□□□ -0.93
COLCA1-205ENST00000620864 MS4A1P11836 297 aa9.23□□□□□ -0.93
COLCA1-205ENST00000620864 SETQ01105 290 aaPredicted RBP9.23□□□□□ -0.93
COLCA1-205ENST00000620864 MRS2Q9HD23 443 aa9.23□□□□□ -0.93
COLCA1-205ENST00000620864 NUTM2BA6NNL0 878 aaPredicted RBP9.22□□□□□ -0.93
COLCA1-205ENST00000620864 NUTM2EB1AL46 878 aaPredicted RBP9.22□□□□□ -0.93
COLCA1-205ENST00000620864 NUTM2DQ5VT03 806 aaPredicted RBP9.22□□□□□ -0.93
COLCA1-205ENST00000620864 NUTM2AQ8IVF1 878 aaPredicted RBP9.22□□□□□ -0.93
COLCA1-205ENST00000620864 KIAA2012Q0VF49 1180 aa9.21□□□□□ -0.93
COLCA1-205ENST00000620864 GOLGA6L1Q8N7Z2 621 aa9.21□□□□□ -0.94
COLCA1-205ENST00000620864 VSIG10Q8N0Z9 540 aa9.21□□□□□ -0.94
COLCA1-205ENST00000620864 ARID3AQ99856 593 aa9.21□□□□□ -0.94
COLCA1-205ENST00000620864 OSCARQ8IYS5 282 aa9.2□□□□□ -0.94
COLCA1-205ENST00000620864 PPP4R2Q9NY27 417 aa9.2□□□□□ -0.94
COLCA1-205ENST00000620864 EIF4G1Q04637 1599 aaKnown RBP9.19□□□□□ -0.94
COLCA1-205ENST00000620864 PDS5BQ9NTI5 1447 aa9.19□□□□□ -0.94
COLCA1-205ENST00000620864 DDX10Q13206 875 aaKnown RBP9.19□□□□□ -0.94
COLCA1-205ENST00000620864 ZCCHC6Q5VYS8 1495 aaKnown RBP9.19□□□□□ -0.94
COLCA1-205ENST00000620864 PNNQ9H307 717 aaKnown RBP9.18□□□□□ -0.94
COLCA1-205ENST00000620864 RSPH6AQ9H0K4 717 aa9.18□□□□□ -0.94
COLCA1-205ENST00000620864 KDM2AQ9Y2K7 1162 aa9.18□□□□□ -0.94
COLCA1-205ENST00000620864 HSP90AB1P08238 724 aaKnown RBP9.17□□□□□ -0.94
COLCA1-205ENST00000620864 HSCBQ8IWL3 235 aa9.17□□□□□ -0.94
COLCA1-205ENST00000620864 MTUS2Q5JR59 1369 aa9.17□□□□□ -0.94
COLCA1-205ENST00000620864 GOLGA6L4A6NEF3 574 aa9.16□□□□□ -0.94
COLCA1-205ENST00000620864 SYAP1Q96A49 352 aaPredicted RBP9.16□□□□□ -0.94
COLCA1-205ENST00000620864 SALL2Q9Y467 1007 aaPredicted RBP9.16□□□□□ -0.94
COLCA1-205ENST00000620864 DEKP35659 375 aaKnown RBP9.16□□□□□ -0.94
COLCA1-205ENST00000620864 APPP05067 770 aa9.16□□□□□ -0.94
COLCA1-205ENST00000620864 GBP4Q96PP9 640 aa9.15□□□□□ -0.95
COLCA1-205ENST00000620864 CDCA8Q53HL2 280 aa9.15□□□□□ -0.95
COLCA1-205ENST00000620864 HTATSF1O43719 755 aaKnown RBP9.14□□□□□ -0.95
COLCA1-205ENST00000620864 MCCP23508 829 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms