RNA–Protein interactions for RNA: ENST00000620033.4

CHL1-216, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 7,311 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-216ENST00000620033 PIP4K2BP78356 416 aa6.27□□□□□ -1.41
CHL1-216ENST00000620033 EID1Q9Y6B2 187 aa6.26□□□□□ -1.41
CHL1-216ENST00000620033 CWC22Q9HCG8 908 aaKnown RBP6.24□□□□□ -1.41
CHL1-216ENST00000620033 EVA1CP58658 441 aa6.24□□□□□ -1.41
CHL1-216ENST00000620033 PAK3O75914 559 aaPredicted RBP6.24□□□□□ -1.41
CHL1-216ENST00000620033 POGKQ9P215 609 aa6.23□□□□□ -1.41
CHL1-216ENST00000620033 CECR2Q9BXF3 1484 aa6.23□□□□□ -1.41
CHL1-216ENST00000620033 ISY1Q9ULR0 285 aaKnown RBP6.22□□□□□ -1.41
CHL1-216ENST00000620033 ZNF316A6NFI3 1004 aaPredicted RBP6.22□□□□□ -1.41
CHL1-216ENST00000620033 FKBP8Q14318 412 aa6.21□□□□□ -1.42
CHL1-216ENST00000620033 CLSTN1O94985 981 aa6.21□□□□□ -1.42
CHL1-216ENST00000620033 EIF4G1Q04637 1599 aaKnown RBP6.2□□□□□ -1.42
CHL1-216ENST00000620033 KANK1Q14678 1352 aa6.2□□□□□ -1.42
CHL1-216ENST00000620033 C16orf71Q8IYS4 520 aaPredicted RBP6.19□□□□□ -1.42
CHL1-216ENST00000620033 SRPK2P78362 688 aaKnown RBP6.18□□□□□ -1.42
CHL1-216ENST00000620033 TMC1Q8TDI8 760 aa6.18□□□□□ -1.42
CHL1-216ENST00000620033 FAM69CQ0P6D2 419 aa6.17□□□□□ -1.42
CHL1-216ENST00000620033 PPM1GO15355 546 aaPredicted RBP6.17□□□□□ -1.42
CHL1-216ENST00000620033 PAXIP1Q6ZW49 1069 aaPredicted RBP6.17□□□□□ -1.42
CHL1-216ENST00000620033 ZNF330Q9Y3S2 320 aaPredicted RBP6.17□□□□□ -1.42
CHL1-216ENST00000620033 NUTM2BA6NNL0 878 aaPredicted RBP6.17□□□□□ -1.42
CHL1-216ENST00000620033 NUTM2EB1AL46 878 aaPredicted RBP6.17□□□□□ -1.42
CHL1-216ENST00000620033 NUTM2DQ5VT03 806 aaPredicted RBP6.17□□□□□ -1.42
CHL1-216ENST00000620033 NUTM2AQ8IVF1 878 aaPredicted RBP6.17□□□□□ -1.42
CHL1-216ENST00000620033 BAZ1BQ9UIG0 1483 aaKnown RBP6.17□□□□□ -1.42
CHL1-216ENST00000620033 PDS5BQ9NTI5 1447 aa6.16□□□□□ -1.42
CHL1-216ENST00000620033 SOX12O15370 315 aa6.16□□□□□ -1.42
CHL1-216ENST00000620033 YTHDC1Q96MU7 727 aaKnown RBP6.15□□□□□ -1.42
CHL1-216ENST00000620033 GGT6Q6P531 493 aa6.15□□□□□ -1.42
CHL1-216ENST00000620033 KDM2AQ9Y2K7 1162 aa6.15□□□□□ -1.43
CHL1-216ENST00000620033 CHIC2Q9UKJ5 165 aa6.14□□□□□ -1.43
CHL1-216ENST00000620033 NEUROD2Q15784 382 aa6.14□□□□□ -1.43
CHL1-216ENST00000620033 ATF3P18847 181 aa6.14□□□□□ -1.43
CHL1-216ENST00000620033 GTF2E1P29083 439 aaPredicted RBP6.12□□□□□ -1.43
CHL1-216ENST00000620033 PRM3Q9NNZ6 103 aa6.12□□□□□ -1.43
CHL1-216ENST00000620033 CNKSR2Q8WXI2 1034 aa6.12□□□□□ -1.43
CHL1-216ENST00000620033 NACADO15069 1562 aa6.11□□□□□ -1.43
CHL1-216ENST00000620033 SMARCA2P51531 1590 aa6.1□□□□□ -1.43
CHL1-216ENST00000620033 CCDC180Q9P1Z9 1646 aa6.1□□□□□ -1.43
CHL1-216ENST00000620033 ZEB1P37275 1124 aaPredicted RBP6.1□□□□□ -1.43
CHL1-216ENST00000620033 CARMIL2Q6F5E8 1435 aa6.1□□□□□ -1.43
CHL1-216ENST00000620033 CTDP1Q9Y5B0 961 aaPredicted RBP6.1□□□□□ -1.43
CHL1-216ENST00000620033 FBXW7Q969H0 707 aa6.09□□□□□ -1.43
CHL1-216ENST00000620033 CLIP1P30622 1438 aa6.09□□□□□ -1.43
CHL1-216ENST00000620033 CENPBP07199 599 aaPredicted RBP6.09□□□□□ -1.43
CHL1-216ENST00000620033 MYH16Q9H6N6 1097 aa6.09□□□□□ -1.43
CHL1-216ENST00000620033 MTUS2Q5JR59 1369 aa6.09□□□□□ -1.43
CHL1-216ENST00000620033 WASHC2AQ641Q2 1341 aa6.09□□□□□ -1.43
CHL1-216ENST00000620033 MAP3K9P80192 1104 aa6.08□□□□□ -1.44
CHL1-216ENST00000620033 SYTL4Q96C24 671 aaPredicted RBP6.08□□□□□ -1.44
CHL1-216ENST00000620033 TRIM34Q9BYJ4 488 aa6.08□□□□□ -1.44
CHL1-216ENST00000620033 CFDP1Q9UEE9 299 aaPredicted RBP6.07□□□□□ -1.44
CHL1-216ENST00000620033 CCAR1Q8IX12 1150 aaKnown RBP6.07□□□□□ -1.44
CHL1-216ENST00000620033 DMRT2Q9Y5R5 561 aa6.07□□□□□ -1.44
CHL1-216ENST00000620033 STK26Q9P289 416 aa6.06□□□□□ -1.44
CHL1-216ENST00000620033 TAOK2Q9UL54 1235 aa6.06□□□□□ -1.44
CHL1-216ENST00000620033 WDR43Q15061 677 aaKnown RBP eCLIP6.06□□□□□ -1.44
CHL1-216ENST00000620033 RGL3Q3MIN7 710 aa6.05□□□□□ -1.44
CHL1-216ENST00000620033 NGDNQ8NEJ9 315 aaKnown RBP6.05□□□□□ -1.44
CHL1-216ENST00000620033 OS9Q13438 667 aaPredicted RBP6.04□□□□□ -1.44
CHL1-216ENST00000620033 LAS1LQ9Y4W2 734 aaKnown RBP6.04□□□□□ -1.44
CHL1-216ENST00000620033 SAFB2Q14151 953 aaKnown RBP eCLIP6.04□□□□□ -1.44
CHL1-216ENST00000620033 CFAP53Q96M91 514 aa6.03□□□□□ -1.44
CHL1-216ENST00000620033 FRAT2O75474 233 aaPredicted RBP6.02□□□□□ -1.45
CHL1-216ENST00000620033 TRIM26Q12899 539 aaPredicted RBP6.02□□□□□ -1.45
CHL1-216ENST00000620033 WDHD1O75717 1129 aaPredicted RBP6.02□□□□□ -1.45
CHL1-216ENST00000620033 TAF7LQ5H9L4 462 aa6.02□□□□□ -1.45
CHL1-216ENST00000620033 RSF1Q96T23 1441 aaPredicted RBP6.02□□□□□ -1.45
CHL1-216ENST00000620033 CSRNP3Q8WYN3 585 aa6.02□□□□□ -1.45
CHL1-216ENST00000620033 RTF1Q92541 710 aaKnown RBP6.01□□□□□ -1.45
CHL1-216ENST00000620033 WASHC2CQ9Y4E1 1318 aa6.01□□□□□ -1.45
CHL1-216ENST00000620033 UBAP1LF5GYI3 381 aa6.01□□□□□ -1.45
CHL1-216ENST00000620033 PSME1Q06323 249 aa6□□□□□ -1.45
CHL1-216ENST00000620033 ANP32CO43423 234 aa6□□□□□ -1.45
CHL1-216ENST00000620033 HSP90AA1P07900 732 aaKnown RBP6□□□□□ -1.45
CHL1-216ENST00000620033 GRM1Q13255 1194 aa6□□□□□ -1.45
CHL1-216ENST00000620033 HMGB2P26583 209 aaKnown RBP5.99□□□□□ -1.45
CHL1-216ENST00000620033 BEGAINQ9BUH8 593 aa5.99□□□□□ -1.45
CHL1-216ENST00000620033 CEP164Q9UPV0 1460 aa5.99□□□□□ -1.45
CHL1-216ENST00000620033 PDE3BQ13370 1112 aa5.99□□□□□ -1.45
CHL1-216ENST00000620033 POGZQ7Z3K3 1410 aa5.99□□□□□ -1.45
CHL1-216ENST00000620033 MAPK8IP3Q9UPT6 1336 aa5.98□□□□□ -1.45
CHL1-216ENST00000620033 VPS53Q5VIR6 699 aa5.98□□□□□ -1.45
CHL1-216ENST00000620033 HDGFL2Q7Z4V5 671 aaPredicted RBP5.98□□□□□ -1.45
CHL1-216ENST00000620033 TCEAL9Q9UHQ7 104 aa5.98□□□□□ -1.45
CHL1-216ENST00000620033 NUTM2FA1L443 756 aa5.98□□□□□ -1.45
CHL1-216ENST00000620033 EFCAB2Q5VUJ9 269 aa5.98□□□□□ -1.45
CHL1-216ENST00000620033 CHMP3Q9Y3E7 222 aa5.98□□□□□ -1.45
CHL1-216ENST00000620033 DIEXFQ68CQ4 756 aaKnown RBP5.98□□□□□ -1.45
CHL1-216ENST00000620033 PROSER2Q86WR7 435 aaPredicted RBP5.98□□□□□ -1.45
CHL1-216ENST00000620033 SPDYE4A6NLX3 237 aa5.97□□□□□ -1.45
CHL1-216ENST00000620033 NOL10Q9BSC4 688 aaKnown RBP5.97□□□□□ -1.45
CHL1-216ENST00000620033 CDCA8Q53HL2 280 aa5.97□□□□□ -1.45
CHL1-216ENST00000620033 PNNQ9H307 717 aaKnown RBP5.97□□□□□ -1.45
CHL1-216ENST00000620033 RRP7BPQ9NSQ0 103 aa5.97□□□□□ -1.45
CHL1-216ENST00000620033 NUDCQ9Y266 331 aa5.97□□□□□ -1.45
CHL1-216ENST00000620033 CCNB3Q8WWL7 1395 aa5.97□□□□□ -1.45
CHL1-216ENST00000620033 KCNJ4P48050 445 aa5.97□□□□□ -1.45
CHL1-216ENST00000620033 LTV1Q96GA3 475 aaPredicted RBP5.97□□□□□ -1.45
CHL1-216ENST00000620033 IL27Q8NEV9 243 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms