RNA–Protein interactions for RNA: ENST00000619564.3

FGFR1-241, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 5,482 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-241ENST00000619564 RRP7BPQ9NSQ0 103 aa26.96■■□□□ 1.91
FGFR1-241ENST00000619564 CCDC180Q9P1Z9 1646 aa26.94■■□□□ 1.9
FGFR1-241ENST00000619564 MYH16Q9H6N6 1097 aa26.93■■□□□ 1.9
FGFR1-241ENST00000619564 EIF4G2P78344 907 aaKnown RBP eCLIP26.9■■□□□ 1.9
FGFR1-241ENST00000619564 SENP3Q9H4L4 574 aaPredicted RBP26.9■■□□□ 1.9
FGFR1-241ENST00000619564 PLEKHG5O94827 1062 aa26.88■■□□□ 1.89
FGFR1-241ENST00000619564 ARID4BQ4LE39 1312 aaPredicted RBP26.87■■□□□ 1.89
FGFR1-241ENST00000619564 EEA1Q15075 1411 aa26.8■■□□□ 1.88
FGFR1-241ENST00000619564 HAP1P54257 671 aaPredicted RBP26.79■■□□□ 1.88
FGFR1-241ENST00000619564 RGL3Q3MIN7 710 aa26.79■■□□□ 1.88
FGFR1-241ENST00000619564 CFDP1Q9UEE9 299 aaPredicted RBP26.78■■□□□ 1.88
FGFR1-241ENST00000619564 GOLGA3Q08378 1498 aa26.77■■□□□ 1.88
FGFR1-241ENST00000619564 HIRIP3Q9BW71 556 aaPredicted RBP26.76■■□□□ 1.87
FGFR1-241ENST00000619564 CDCA8Q53HL2 280 aa26.73■■□□□ 1.87
FGFR1-241ENST00000619564 CFAP53Q96M91 514 aa26.73■■□□□ 1.87
FGFR1-241ENST00000619564 BAZ1BQ9UIG0 1483 aaKnown RBP26.73■■□□□ 1.87
FGFR1-241ENST00000619564 WRNQ14191 1432 aaPredicted RBP eCLIP26.68■■□□□ 1.86
FGFR1-241ENST00000619564 KIF27Q86VH2 1401 aa26.68■■□□□ 1.86
FGFR1-241ENST00000619564 ERCC6Q03468 1493 aa26.65■■□□□ 1.86
FGFR1-241ENST00000619564 KNSTRNQ9Y448 316 aa26.64■■□□□ 1.85
FGFR1-241ENST00000619564 CEP162Q5TB80 1403 aa26.63■■□□□ 1.85
FGFR1-241ENST00000619564 PPM1GO15355 546 aaPredicted RBP26.59■■□□□ 1.85
FGFR1-241ENST00000619564 CDK11BP21127 795 aaKnown RBP26.57■■□□□ 1.84
FGFR1-241ENST00000619564 IRX6P78412 446 aaPredicted RBP26.57■■□□□ 1.84
FGFR1-241ENST00000619564 CARD11Q9BXL7 1154 aa26.57■■□□□ 1.84
FGFR1-241ENST00000619564 NACADO15069 1562 aa26.56■■□□□ 1.84
FGFR1-241ENST00000619564 ARXQ96QS3 562 aa26.56■■□□□ 1.84
FGFR1-241ENST00000619564 MIER1Q8N108 512 aa26.54■■□□□ 1.84
FGFR1-241ENST00000619564 POGKQ9P215 609 aa26.54■■□□□ 1.84
FGFR1-241ENST00000619564 EIF5BO60841 1220 aaKnown RBP26.53■■□□□ 1.84
FGFR1-241ENST00000619564 LMOD2Q6P5Q4 547 aa26.49■■□□□ 1.83
FGFR1-241ENST00000619564 NBR1Q14596 966 aa26.49■■□□□ 1.83
FGFR1-241ENST00000619564 CEP164Q9UPV0 1460 aa26.49■■□□□ 1.83
FGFR1-241ENST00000619564 MAPK8IP3Q9UPT6 1336 aa26.48■■□□□ 1.83
FGFR1-241ENST00000619564 BECN1Q14457 450 aa26.47■■□□□ 1.83
FGFR1-241ENST00000619564 NUDCQ9Y266 331 aa26.47■■□□□ 1.83
FGFR1-241ENST00000619564 NCLP19338 710 aaKnown RBP26.46■■□□□ 1.83
FGFR1-241ENST00000619564 FTSJ3Q8IY81 847 aaKnown RBP26.43■■□□□ 1.82
FGFR1-241ENST00000619564 TNIKQ9UKE5 1360 aa26.41■■□□□ 1.82
FGFR1-241ENST00000619564 DDRGK1Q96HY6 314 aa26.4■■□□□ 1.82
FGFR1-241ENST00000619564 CASC1Q6TDU7 716 aa26.4■■□□□ 1.82
FGFR1-241ENST00000619564 CCNB3Q8WWL7 1395 aa26.4■■□□□ 1.82
FGFR1-241ENST00000619564 LAS1LQ9Y4W2 734 aaKnown RBP26.39■■□□□ 1.82
FGFR1-241ENST00000619564 NEUROD2Q15784 382 aa26.38■■□□□ 1.81
FGFR1-241ENST00000619564 GOLGA6L22H0YM25 854 aa26.35■■□□□ 1.81
FGFR1-241ENST00000619564 KANK1Q14678 1352 aa26.34■■□□□ 1.81
FGFR1-241ENST00000619564 TRHP20396 242 aaPredicted RBP26.33■■□□□ 1.81
FGFR1-241ENST00000619564 HDGFP51858 240 aaKnown RBP26.32■■□□□ 1.8
FGFR1-241ENST00000619564 NPHP1O15259 732 aa26.32■■□□□ 1.8
FGFR1-241ENST00000619564 SENP3-EIF4A1A0A087X0R7 540 aa26.3■■□□□ 1.8
FGFR1-241ENST00000619564 FHAD1B1AJZ9 1412 aa26.29■■□□□ 1.8
FGFR1-241ENST00000619564 TNNT2P45379 298 aaPredicted RBP26.28■■□□□ 1.8
FGFR1-241ENST00000619564 EIF4G1Q04637 1599 aaKnown RBP26.28■■□□□ 1.8
FGFR1-241ENST00000619564 ANP32EQ9BTT0 268 aa26.27■■□□□ 1.8
FGFR1-241ENST00000619564 ZRSR1Q15695 479 aaKnown RBP26.26■■□□□ 1.79
FGFR1-241ENST00000619564 PNNQ9H307 717 aaKnown RBP26.26■■□□□ 1.79
FGFR1-241ENST00000619564 CHMP4BQ9H444 224 aaKnown RBP26.25■■□□□ 1.79
FGFR1-241ENST00000619564 BAZ1AQ9NRL2 1556 aaPredicted RBP26.25■■□□□ 1.79
FGFR1-241ENST00000619564 MLECQ14165 292 aa26.24■■□□□ 1.79
FGFR1-241ENST00000619564 U2SURPO15042 1029 aaKnown RBP26.24■■□□□ 1.79
FGFR1-241ENST00000619564 TMF1P82094 1093 aa26.22■■□□□ 1.79
FGFR1-241ENST00000619564 CC2D1BQ5T0F9 858 aaKnown RBP26.21■■□□□ 1.79
FGFR1-241ENST00000619564 SIN3AQ96ST3 1273 aa26.21■■□□□ 1.79
FGFR1-241ENST00000619564 CARMIL1Q5VZK9 1371 aa26.21■■□□□ 1.79
FGFR1-241ENST00000619564 DCAF11Q8TEB1 546 aa26.19■■□□□ 1.78
FGFR1-241ENST00000619564 FRAT1Q92837 279 aaPredicted RBP26.18■■□□□ 1.78
FGFR1-241ENST00000619564 MS4A1P11836 297 aa26.18■■□□□ 1.78
FGFR1-241ENST00000619564 GLIPR1L2Q4G1C9 344 aa26.18■■□□□ 1.78
FGFR1-241ENST00000619564 CUX2O14529 1486 aa26.18■■□□□ 1.78
FGFR1-241ENST00000619564 OS9Q13438 667 aaPredicted RBP26.18■■□□□ 1.78
FGFR1-241ENST00000619564 TRIM44Q96DX7 344 aaPredicted RBP26.16■■□□□ 1.78
FGFR1-241ENST00000619564 SRPK2P78362 688 aaKnown RBP26.14■■□□□ 1.78
FGFR1-241ENST00000619564 SUPT16HQ9Y5B9 1047 aaKnown RBP26.14■■□□□ 1.77
FGFR1-241ENST00000619564 MYO15BQ96JP2 1530 aa26.12■■□□□ 1.77
FGFR1-241ENST00000619564 GOLGA2Q08379 1002 aa26.08■■□□□ 1.77
FGFR1-241ENST00000619564 GGT6Q6P531 493 aa26.07■■□□□ 1.76
FGFR1-241ENST00000619564 SOX12O15370 315 aa26.07■■□□□ 1.76
FGFR1-241ENST00000619564 FGD1P98174 961 aa26.05■■□□□ 1.76
FGFR1-241ENST00000619564 CARMIL2Q6F5E8 1435 aa26.05■■□□□ 1.76
FGFR1-241ENST00000619564 PTMAP06454 111 aaKnown RBP26.04■■□□□ 1.76
FGFR1-241ENST00000619564 RGS3P49796 1198 aa26.04■■□□□ 1.76
FGFR1-241ENST00000619564 MORC1Q86VD1 984 aa26.04■■□□□ 1.76
FGFR1-241ENST00000619564 TULP1O00294 542 aaPredicted RBP26.04■■□□□ 1.76
FGFR1-241ENST00000619564 TPRNQ4KMQ1 711 aa26.04■■□□□ 1.76
FGFR1-241ENST00000619564 SAFB2Q14151 953 aaKnown RBP eCLIP26.03■■□□□ 1.76
FGFR1-241ENST00000619564 KCNJ4P48050 445 aa26.02■■□□□ 1.76
FGFR1-241ENST00000619564 PPP4R2Q9NY27 417 aa25.98■■□□□ 1.75
FGFR1-241ENST00000619564 TAOK2Q9UL54 1235 aa25.98■■□□□ 1.75
FGFR1-241ENST00000619564 TIMELESSQ9UNS1 1208 aa25.97■■□□□ 1.75
FGFR1-241ENST00000619564 HDGFL2Q7Z4V5 671 aaPredicted RBP25.97■■□□□ 1.75
FGFR1-241ENST00000619564 RTF1Q92541 710 aaKnown RBP25.96■■□□□ 1.75
FGFR1-241ENST00000619564 STK26Q9P289 416 aa25.96■■□□□ 1.75
FGFR1-241ENST00000619564 CECR2Q9BXF3 1484 aa25.95■■□□□ 1.74
FGFR1-241ENST00000619564 ARHGAP35Q9NRY4 1499 aa25.95■■□□□ 1.74
FGFR1-241ENST00000619564 PDS5BQ9NTI5 1447 aa25.94■■□□□ 1.74
FGFR1-241ENST00000619564 NAP1L2Q9ULW6 460 aaPredicted RBP25.93■■□□□ 1.74
FGFR1-241ENST00000619564 PKD2Q13563 968 aa25.93■■□□□ 1.74
FGFR1-241ENST00000619564 HSP90AB1P08238 724 aaKnown RBP25.91■■□□□ 1.74
FGFR1-241ENST00000619564 EFCAB2Q5VUJ9 269 aa25.9■■□□□ 1.74
FGFR1-241ENST00000619564 SOGA1O94964 1423 aa25.89■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms