RNA–Protein interactions for RNA: ENST00000619199.4

ATP13A3-211, Transcript of ATPase 13A3, humanhuman

TSL 2 BASIC

Gene ATP13A3, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-211ENST00000619199 CASC1Q6TDU7 716 aa6.32□□□□□ -1.4
ATP13A3-211ENST00000619199 PODXL2Q9NZ53 605 aa6.32□□□□□ -1.4
ATP13A3-211ENST00000619199 CHMP4BQ9H444 224 aaKnown RBP6.31□□□□□ -1.4
ATP13A3-211ENST00000619199 WDR43Q15061 677 aaKnown RBP eCLIP6.3□□□□□ -1.4
ATP13A3-211ENST00000619199 EIF4G2P78344 907 aaKnown RBP eCLIP6.29□□□□□ -1.42e-6■■■□□ 15.2
ATP13A3-211ENST00000619199 RBM19Q9Y4C8 960 aaKnown RBP6.28□□□□□ -1.4
ATP13A3-211ENST00000619199 PTMAP06454 111 aaKnown RBP6.28□□□□□ -1.4
ATP13A3-211ENST00000619199 FBLN2P98095 1184 aa6.28□□□□□ -1.4
ATP13A3-211ENST00000619199 GOLGA3Q08378 1498 aa6.28□□□□□ -1.4
ATP13A3-211ENST00000619199 USP35Q9P2H5 1018 aa6.28□□□□□ -1.4
ATP13A3-211ENST00000619199 CHGAP10645 457 aaKnown RBP6.27□□□□□ -1.41
ATP13A3-211ENST00000619199 FKBP8Q14318 412 aa6.27□□□□□ -1.41
ATP13A3-211ENST00000619199 CFAP44Q96MT7 982 aa6.26□□□□□ -1.41
ATP13A3-211ENST00000619199 CHAF1AQ13111 956 aaPredicted RBP6.26□□□□□ -1.41
ATP13A3-211ENST00000619199 TONSLQ96HA7 1378 aa6.26□□□□□ -1.41
ATP13A3-211ENST00000619199 ERICH6BQ5W0A0 696 aa6.25□□□□□ -1.41
ATP13A3-211ENST00000619199 CCDC136Q96JN2 1154 aa6.25□□□□□ -1.41
ATP13A3-211ENST00000619199 SCRIBQ14160 1630 aa6.25□□□□□ -1.41
ATP13A3-211ENST00000619199 TIMELESSQ9UNS1 1208 aa6.25□□□□□ -1.41
ATP13A3-211ENST00000619199 VPS8Q8N3P4 1428 aa6.25□□□□□ -1.41
ATP13A3-211ENST00000619199 CECR2Q9BXF3 1484 aa6.24□□□□□ -1.41
ATP13A3-211ENST00000619199 CLIP1P30622 1438 aa6.24□□□□□ -1.41
ATP13A3-211ENST00000619199 FANCIQ9NVI1 1328 aa6.24□□□□□ -1.41
ATP13A3-211ENST00000619199 MROH2BQ7Z745 1585 aa6.24□□□□□ -1.41
ATP13A3-211ENST00000619199 TMC1Q8TDI8 760 aa6.24□□□□□ -1.41
ATP13A3-211ENST00000619199 CFAP53Q96M91 514 aa6.24□□□□□ -1.41
ATP13A3-211ENST00000619199 KIAA2012Q0VF49 1180 aa6.23□□□□□ -1.41
ATP13A3-211ENST00000619199 DNTTIP2Q5QJE6 756 aaKnown RBP6.23□□□□□ -1.41
ATP13A3-211ENST00000619199 MS4A1P11836 297 aa6.23□□□□□ -1.41
ATP13A3-211ENST00000619199 HAP1P54257 671 aaPredicted RBP6.23□□□□□ -1.41
ATP13A3-211ENST00000619199 CDCA8Q53HL2 280 aa6.23□□□□□ -1.41
ATP13A3-211ENST00000619199 CEP164Q9UPV0 1460 aa6.23□□□□□ -1.41
ATP13A3-211ENST00000619199 A0A0G2JS52 829 aa6.23□□□□□ -1.41
ATP13A3-211ENST00000619199 CCDC88BA6NC98 1476 aa6.23□□□□□ -1.41
ATP13A3-211ENST00000619199 DHX57Q6P158 1386 aaKnown RBP6.22□□□□□ -1.41
ATP13A3-211ENST00000619199 ZNF777Q9ULD5 760 aaPredicted RBP6.22□□□□□ -1.41
ATP13A3-211ENST00000619199 SOGA1O94964 1423 aa6.22□□□□□ -1.41
ATP13A3-211ENST00000619199 CCER2I3L3R5 266 aa6.21□□□□□ -1.41
ATP13A3-211ENST00000619199 GOLGA2Q08379 1002 aa6.21□□□□□ -1.41
ATP13A3-211ENST00000619199 TPRNQ4KMQ1 711 aa6.21□□□□□ -1.41
ATP13A3-211ENST00000619199 PPM1GO15355 546 aaPredicted RBP6.21□□□□□ -1.42
ATP13A3-211ENST00000619199 PNNQ9H307 717 aaKnown RBP6.21□□□□□ -1.42
ATP13A3-211ENST00000619199 C14orf37Q86TY3 774 aa6.2□□□□□ -1.42
ATP13A3-211ENST00000619199 BAZ1AQ9NRL2 1556 aaPredicted RBP6.2□□□□□ -1.42
ATP13A3-211ENST00000619199 NPHP1O15259 732 aa6.2□□□□□ -1.42
ATP13A3-211ENST00000619199 HNRNPUQ00839 825 aaKnown RBP eCLIP6.19□□□□□ -1.42
ATP13A3-211ENST00000619199 PPP1R15AO75807 674 aaPredicted RBP6.19□□□□□ -1.42
ATP13A3-211ENST00000619199 TSPY4P0CV99 314 aa6.19□□□□□ -1.42
ATP13A3-211ENST00000619199 TSPY10P0CW01 314 aa6.19□□□□□ -1.42
ATP13A3-211ENST00000619199 CCDC34Q96HJ3 373 aa6.19□□□□□ -1.42
ATP13A3-211ENST00000619199 PTMSP20962 102 aa6.19□□□□□ -1.42
ATP13A3-211ENST00000619199 CHMP4AQ9BY43 222 aa6.18□□□□□ -1.42
ATP13A3-211ENST00000619199 FGD1P98174 961 aa6.18□□□□□ -1.42
ATP13A3-211ENST00000619199 GOLGA6L4A6NEF3 574 aa6.17□□□□□ -1.42
ATP13A3-211ENST00000619199 HTATSF1O43719 755 aaKnown RBP6.17□□□□□ -1.42
ATP13A3-211ENST00000619199 NACADO15069 1562 aa6.17□□□□□ -1.42
ATP13A3-211ENST00000619199 KLHL34Q8N239 644 aa6.17□□□□□ -1.42
ATP13A3-211ENST00000619199 BAZ1BQ9UIG0 1483 aaKnown RBP6.17□□□□□ -1.42
ATP13A3-211ENST00000619199 DDX10Q13206 875 aaKnown RBP6.16□□□□□ -1.42
ATP13A3-211ENST00000619199 NUDCQ9Y266 331 aa6.16□□□□□ -1.42
ATP13A3-211ENST00000619199 CLSTN1O94985 981 aa6.16□□□□□ -1.42
ATP13A3-211ENST00000619199 EIF4G1Q04637 1599 aaKnown RBP6.16□□□□□ -1.42
ATP13A3-211ENST00000619199 MCCP23508 829 aa6.16□□□□□ -1.42
ATP13A3-211ENST00000619199 WIZO95785 1651 aa6.15□□□□□ -1.42
ATP13A3-211ENST00000619199 TMX4Q9H1E5 349 aaPredicted RBP6.15□□□□□ -1.43
ATP13A3-211ENST00000619199 ABCC8Q09428 1581 aa6.15□□□□□ -1.43
ATP13A3-211ENST00000619199 NOC3LQ8WTT2 800 aaKnown RBP6.15□□□□□ -1.43
ATP13A3-211ENST00000619199 FAM9BQ8IZU0 186 aa6.14□□□□□ -1.43
ATP13A3-211ENST00000619199 PRM3Q9NNZ6 103 aa6.14□□□□□ -1.43
ATP13A3-211ENST00000619199 TAOK2Q9UL54 1235 aa6.14□□□□□ -1.43
ATP13A3-211ENST00000619199 KCNJ4P48050 445 aa6.13□□□□□ -1.43
ATP13A3-211ENST00000619199 TPM4P67936 248 aa6.13□□□□□ -1.43
ATP13A3-211ENST00000619199 MAPK8IP3Q9UPT6 1336 aa6.13□□□□□ -1.43
ATP13A3-211ENST00000619199 TOP2AP11388 1531 aaKnown RBP6.13□□□□□ -1.43
ATP13A3-211ENST00000619199 MSH5O43196 834 aa6.13□□□□□ -1.43
ATP13A3-211ENST00000619199 DEKP35659 375 aaKnown RBP6.13□□□□□ -1.43
ATP13A3-211ENST00000619199 FTSJ3Q8IY81 847 aaKnown RBP6.13□□□□□ -1.43
ATP13A3-211ENST00000619199 PLEKHG5O94827 1062 aa6.13□□□□□ -1.43
ATP13A3-211ENST00000619199 HDGFP51858 240 aaKnown RBP6.13□□□□□ -1.43
ATP13A3-211ENST00000619199 KRI1Q8N9T8 703 aaKnown RBP6.13□□□□□ -1.43
ATP13A3-211ENST00000619199 GOLGA6L1Q8N7Z2 621 aa6.13□□□□□ -1.43
ATP13A3-211ENST00000619199 MRS2Q9HD23 443 aa6.13□□□□□ -1.43
ATP13A3-211ENST00000619199 CCNB3Q8WWL7 1395 aa6.13□□□□□ -1.43
ATP13A3-211ENST00000619199 KCNH8Q96L42 1107 aa6.12□□□□□ -1.43
ATP13A3-211ENST00000619199 CEP89Q96ST8 783 aa6.12□□□□□ -1.43
ATP13A3-211ENST00000619199 ANO8Q9HCE9 1232 aaPredicted RBP6.12□□□□□ -1.43
ATP13A3-211ENST00000619199 RUSC2Q8N2Y8 1516 aa6.12□□□□□ -1.43
ATP13A3-211ENST00000619199 ARID4BQ4LE39 1312 aaPredicted RBP6.12□□□□□ -1.43
ATP13A3-211ENST00000619199 ZBTB7CA1YPR0 619 aa6.12□□□□□ -1.43
ATP13A3-211ENST00000619199 OS9Q13438 667 aaPredicted RBP6.12□□□□□ -1.43
ATP13A3-211ENST00000619199 HDAC5Q9UQL6 1122 aa6.12□□□□□ -1.43
ATP13A3-211ENST00000619199 KIF21BO75037 1637 aa6.12□□□□□ -1.43
ATP13A3-211ENST00000619199 KCNA4P22459 653 aa6.12□□□□□ -1.43
ATP13A3-211ENST00000619199 PPP4R2Q9NY27 417 aa6.12□□□□□ -1.43
ATP13A3-211ENST00000619199 CUX2O14529 1486 aa6.11□□□□□ -1.43
ATP13A3-211ENST00000619199 NBR1Q14596 966 aa6.11□□□□□ -1.43
ATP13A3-211ENST00000619199 NAP1L5Q96NT1 182 aaPredicted RBP6.11□□□□□ -1.43
ATP13A3-211ENST00000619199 RRBP1Q9P2E9 1410 aaKnown RBP6.11□□□□□ -1.43
ATP13A3-211ENST00000619199 MSNP26038 577 aaKnown RBP6.11□□□□□ -1.43
ATP13A3-211ENST00000619199 CHMP4CQ96CF2 233 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms