RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 WRNQ14191 1432 aaPredicted RBP eCLIP15.12■□□□□ 0.01
POLR2A-209ENST00000617998 KDM2AQ9Y2K7 1162 aa15.12■□□□□ 0.01
POLR2A-209ENST00000617998 TDRD9Q8NDG6 1382 aaKnown RBP15.1■□□□□ 0.01
POLR2A-209ENST00000617998 CLSPNQ9HAW4 1339 aa15.1■□□□□ 0.01
POLR2A-209ENST00000617998 BAZ1AQ9NRL2 1556 aaPredicted RBP15.09■□□□□ 0.01
POLR2A-209ENST00000617998 SOGA1O94964 1423 aa15.09■□□□□ 0.01
POLR2A-209ENST00000617998 CEP164Q9UPV0 1460 aa15.09■□□□□ 0.01
POLR2A-209ENST00000617998 KANK1Q14678 1352 aa15.09■□□□□ 0.01
POLR2A-209ENST00000617998 RSF1Q96T23 1441 aaPredicted RBP15.08■□□□□ 0
POLR2A-209ENST00000617998 CANXP27824 592 aaKnown RBP15.07■□□□□ 0
POLR2A-209ENST00000617998 TRIM26Q12899 539 aaPredicted RBP15.06■□□□□ 0
POLR2A-209ENST00000617998 ERICH6Q7L0X2 663 aa15.06■□□□□ 0
POLR2A-209ENST00000617998 EFCAB2Q5VUJ9 269 aa15.04■□□□□ -0
POLR2A-209ENST00000617998 CADPSQ9ULU8 1353 aa15.04■□□□□ -0
POLR2A-209ENST00000617998 DAXXQ9UER7 740 aaPredicted RBP15.03■□□□□ -0
POLR2A-209ENST00000617998 YTHDC1Q96MU7 727 aaKnown RBP15.02■□□□□ -0
POLR2A-209ENST00000617998 CLIP1P30622 1438 aa15.01□□□□□ -0.01
POLR2A-209ENST00000617998 TMC1Q8TDI8 760 aa15.01□□□□□ -0.01
POLR2A-209ENST00000617998 CUX2O14529 1486 aa15.01□□□□□ -0.01
POLR2A-209ENST00000617998 RGL3Q3MIN7 710 aa15□□□□□ -0.01
POLR2A-209ENST00000617998 JPH4Q96JJ6 628 aa15□□□□□ -0.01
POLR2A-209ENST00000617998 CENPBP07199 599 aaPredicted RBP14.98□□□□□ -0.01
POLR2A-209ENST00000617998 RRP7BPQ9NSQ0 103 aa14.97□□□□□ -0.01
POLR2A-209ENST00000617998 CSB-PGBD3P0DP91 1061 aa14.96□□□□□ -0.02
POLR2A-209ENST00000617998 PAK3O75914 559 aaPredicted RBP14.94□□□□□ -0.02
POLR2A-209ENST00000617998 CCNB3Q8WWL7 1395 aa14.94□□□□□ -0.02
POLR2A-209ENST00000617998 DNAJC5BQ9UF47 199 aa14.94□□□□□ -0.02
POLR2A-209ENST00000617998 CARMIL1Q5VZK9 1371 aa14.93□□□□□ -0.02
POLR2A-209ENST00000617998 SF3B2Q13435 895 aaKnown RBP14.91□□□□□ -0.02
POLR2A-209ENST00000617998 PPM1GO15355 546 aaPredicted RBP14.9□□□□□ -0.02
POLR2A-209ENST00000617998 TMX4Q9H1E5 349 aaPredicted RBP14.89□□□□□ -0.03
POLR2A-209ENST00000617998 SOX12O15370 315 aa14.86□□□□□ -0.03
POLR2A-209ENST00000617998 WASHC2CQ9Y4E1 1318 aa14.86□□□□□ -0.03
POLR2A-209ENST00000617998 TONSLQ96HA7 1378 aa14.86□□□□□ -0.03
POLR2A-209ENST00000617998 KLHL34Q8N239 644 aa14.85□□□□□ -0.03
POLR2A-209ENST00000617998 PTPRGP23470 1445 aa14.85□□□□□ -0.03
POLR2A-209ENST00000617998 MSH5O43196 834 aa14.84□□□□□ -0.03
POLR2A-209ENST00000617998 FANCD2Q9BXW9 1451 aa14.84□□□□□ -0.03
POLR2A-209ENST00000617998 KIF3BO15066 747 aa14.83□□□□□ -0.04
POLR2A-209ENST00000617998 PIP4K2BP78356 416 aa14.82□□□□□ -0.04
POLR2A-209ENST00000617998 STK26Q9P289 416 aa14.81□□□□□ -0.04
POLR2A-209ENST00000617998 SPAG9O60271 1321 aaKnown RBP14.8□□□□□ -0.04
POLR2A-209ENST00000617998 ABCC8Q09428 1581 aa14.79□□□□□ -0.04
POLR2A-209ENST00000617998 EVA1CP58658 441 aa14.78□□□□□ -0.04
POLR2A-209ENST00000617998 ANP32CO43423 234 aa14.78□□□□□ -0.04
POLR2A-209ENST00000617998 SAFB2Q14151 953 aaKnown RBP eCLIP14.78□□□□□ -0.04
POLR2A-209ENST00000617998 EIF4G2P78344 907 aaKnown RBP eCLIP14.78□□□□□ -0.04
POLR2A-209ENST00000617998 ACIN1Q9UKV3 1341 aaKnown RBP14.77□□□□□ -0.05
POLR2A-209ENST00000617998 SRPK2P78362 688 aaKnown RBP14.76□□□□□ -0.05
POLR2A-209ENST00000617998 ATF3P18847 181 aa14.76□□□□□ -0.05
POLR2A-209ENST00000617998 ATAD2BQ9ULI0 1458 aa14.74□□□□□ -0.05
POLR2A-209ENST00000617998 CDCA8Q53HL2 280 aa14.72□□□□□ -0.05
POLR2A-209ENST00000617998 DCAF1Q9Y4B6 1507 aa14.72□□□□□ -0.05
POLR2A-209ENST00000617998 NGDNQ8NEJ9 315 aaKnown RBP14.71□□□□□ -0.05
POLR2A-209ENST00000617998 WDR43Q15061 677 aaKnown RBP eCLIP14.71□□□□□ -0.06
POLR2A-209ENST00000617998 CFAP53Q96M91 514 aa14.69□□□□□ -0.06
POLR2A-209ENST00000617998 EEA1Q15075 1411 aa14.68□□□□□ -0.06
POLR2A-209ENST00000617998 CC2D2AQ9P2K1 1620 aa14.67□□□□□ -0.06
POLR2A-209ENST00000617998 ZNF330Q9Y3S2 320 aaPredicted RBP14.67□□□□□ -0.06
POLR2A-209ENST00000617998 GOLGA2Q08379 1002 aa14.66□□□□□ -0.06
POLR2A-209ENST00000617998 G3V3G9 751 aa14.66□□□□□ -0.06
POLR2A-209ENST00000617998 DCAF8Q5TAQ9 597 aa14.66□□□□□ -0.06
POLR2A-209ENST00000617998 ZNF316A6NFI3 1004 aaPredicted RBP14.66□□□□□ -0.06
POLR2A-209ENST00000617998 DMRT2Q9Y5R5 561 aa14.65□□□□□ -0.06
POLR2A-209ENST00000617998 NUTM2FA1L443 756 aa14.64□□□□□ -0.07
POLR2A-209ENST00000617998 NUTM2BA6NNL0 878 aaPredicted RBP14.64□□□□□ -0.07
POLR2A-209ENST00000617998 NUTM2EB1AL46 878 aaPredicted RBP14.64□□□□□ -0.07
POLR2A-209ENST00000617998 NUTM2AQ8IVF1 878 aaPredicted RBP14.64□□□□□ -0.07
POLR2A-209ENST00000617998 FHAD1B1AJZ9 1412 aa14.64□□□□□ -0.07
POLR2A-209ENST00000617998 HNRNPMP52272 730 aaKnown RBP eCLIP14.64□□□□□ -0.07
POLR2A-209ENST00000617998 GOLGA3Q08378 1498 aa14.63□□□□□ -0.07
POLR2A-209ENST00000617998 NUTM2DQ5VT03 806 aaPredicted RBP14.63□□□□□ -0.07
POLR2A-209ENST00000617998 MRC2Q9UBG0 1479 aa14.62□□□□□ -0.07
POLR2A-209ENST00000617998 POGZQ7Z3K3 1410 aa14.62□□□□□ -0.07
POLR2A-209ENST00000617998 MROH2BQ7Z745 1585 aa14.6□□□□□ -0.07
POLR2A-209ENST00000617998 HDGFL2Q7Z4V5 671 aaPredicted RBP14.59□□□□□ -0.07
POLR2A-209ENST00000617998 CCDC88BA6NC98 1476 aa14.59□□□□□ -0.07
POLR2A-209ENST00000617998 RSPH4AQ5TD94 716 aa14.58□□□□□ -0.07
POLR2A-209ENST00000617998 PROSER2Q86WR7 435 aaPredicted RBP14.58□□□□□ -0.07
POLR2A-209ENST00000617998 PPP1R1BQ9UD71 204 aaPredicted RBP14.58□□□□□ -0.07
POLR2A-209ENST00000617998 NUDCQ9Y266 331 aa14.58□□□□□ -0.08
POLR2A-209ENST00000617998 AQRO60306 1485 aaKnown RBP eCLIP14.58□□□□□ -0.082e-7■■■■■ 32.8
POLR2A-209ENST00000617998 GTF2E1P29083 439 aaPredicted RBP14.56□□□□□ -0.08
POLR2A-209ENST00000617998 KNSTRNQ9Y448 316 aa14.56□□□□□ -0.08
POLR2A-209ENST00000617998 MYO15BQ96JP2 1530 aa14.54□□□□□ -0.08
POLR2A-209ENST00000617998 SALL2Q9Y467 1007 aaPredicted RBP14.54□□□□□ -0.08
POLR2A-209ENST00000617998 GAPVD1Q14C86 1478 aa14.54□□□□□ -0.08
POLR2A-209ENST00000617998 TNNT2P45379 298 aaPredicted RBP14.53□□□□□ -0.08
POLR2A-209ENST00000617998 MAPK8IP3Q9UPT6 1336 aa14.53□□□□□ -0.08
POLR2A-209ENST00000617998 CARD11Q9BXL7 1154 aa14.53□□□□□ -0.08
POLR2A-209ENST00000617998 PSME1Q06323 249 aa14.53□□□□□ -0.08
POLR2A-209ENST00000617998 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.52□□□□□ -0.09
POLR2A-209ENST00000617998 LAS1LQ9Y4W2 734 aaKnown RBP14.52□□□□□ -0.09
POLR2A-209ENST00000617998 MYH16Q9H6N6 1097 aa14.52□□□□□ -0.09
POLR2A-209ENST00000617998 THEMISQ8N1K5 641 aaPredicted RBP14.5□□□□□ -0.09
POLR2A-209ENST00000617998 SYTL4Q96C24 671 aaPredicted RBP14.5□□□□□ -0.09
POLR2A-209ENST00000617998 FMN1Q68DA7 1419 aa14.49□□□□□ -0.09
POLR2A-209ENST00000617998 DCAF11Q8TEB1 546 aa14.49□□□□□ -0.09
POLR2A-209ENST00000617998 RTF1Q92541 710 aaKnown RBP14.49□□□□□ -0.09
POLR2A-209ENST00000617998 U2SURPO15042 1029 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms