RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 MRS2Q9HD23 443 aa24.94■■□□□ 1.58
AC008878.3-201ENST00000617428 ARID4BQ4LE39 1312 aaPredicted RBP24.92■■□□□ 1.58
AC008878.3-201ENST00000617428 NACADO15069 1562 aa24.92■■□□□ 1.58
AC008878.3-201ENST00000617428 EEA1Q15075 1411 aa24.9■■□□□ 1.58
AC008878.3-201ENST00000617428 A0A0G2JS52 829 aa24.9■■□□□ 1.58
AC008878.3-201ENST00000617428 KIF27Q86VH2 1401 aa24.89■■□□□ 1.57
AC008878.3-201ENST00000617428 EIF4G2P78344 907 aaKnown RBP eCLIP24.88■■□□□ 1.57
AC008878.3-201ENST00000617428 C14orf37Q86TY3 774 aa24.88■■□□□ 1.57
AC008878.3-201ENST00000617428 GOLGA3Q08378 1498 aa24.88■■□□□ 1.57
AC008878.3-201ENST00000617428 ERCC6Q03468 1493 aa24.86■■□□□ 1.57
AC008878.3-201ENST00000617428 ZBTB7CA1YPR0 619 aa24.86■■□□□ 1.57
AC008878.3-201ENST00000617428 CEP162Q5TB80 1403 aa24.85■■□□□ 1.57
AC008878.3-201ENST00000617428 HSP90AA1P07900 732 aaKnown RBP24.83■■□□□ 1.56
AC008878.3-201ENST00000617428 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.79■■□□□ 1.56
AC008878.3-201ENST00000617428 UPF2Q9HAU5 1272 aaKnown RBP24.77■■□□□ 1.56
AC008878.3-201ENST00000617428 CCDC136Q96JN2 1154 aa24.75■■□□□ 1.55
AC008878.3-201ENST00000617428 MIER1Q8N108 512 aa24.67■■□□□ 1.54
AC008878.3-201ENST00000617428 CECR2Q9BXF3 1484 aa24.66■■□□□ 1.54
AC008878.3-201ENST00000617428 TNIKQ9UKE5 1360 aa24.65■■□□□ 1.54
AC008878.3-201ENST00000617428 CEP164Q9UPV0 1460 aa24.65■■□□□ 1.54
AC008878.3-201ENST00000617428 HAP1P54257 671 aaPredicted RBP24.64■■□□□ 1.53
AC008878.3-201ENST00000617428 PPM1GO15355 546 aaPredicted RBP24.62■■□□□ 1.53
AC008878.3-201ENST00000617428 CARD11Q9BXL7 1154 aa24.62■■□□□ 1.53
AC008878.3-201ENST00000617428 BAZ1AQ9NRL2 1556 aaPredicted RBP24.61■■□□□ 1.53
AC008878.3-201ENST00000617428 IRX6P78412 446 aaPredicted RBP24.6■■□□□ 1.53
AC008878.3-201ENST00000617428 MYO15BQ96JP2 1530 aa24.6■■□□□ 1.53
AC008878.3-201ENST00000617428 SENP3-EIF4A1A0A087X0R7 540 aa24.59■■□□□ 1.53
AC008878.3-201ENST00000617428 TRHP20396 242 aaPredicted RBP24.58■■□□□ 1.53
AC008878.3-201ENST00000617428 CDCA8Q53HL2 280 aa24.57■■□□□ 1.52
AC008878.3-201ENST00000617428 KNSTRNQ9Y448 316 aa24.57■■□□□ 1.52
AC008878.3-201ENST00000617428 CARMIL1Q5VZK9 1371 aa24.55■■□□□ 1.52
AC008878.3-201ENST00000617428 MYH16Q9H6N6 1097 aa24.54■■□□□ 1.52
AC008878.3-201ENST00000617428 CFAP53Q96M91 514 aa24.54■■□□□ 1.52
AC008878.3-201ENST00000617428 LMOD2Q6P5Q4 547 aa24.54■■□□□ 1.52
AC008878.3-201ENST00000617428 POGKQ9P215 609 aa24.53■■□□□ 1.52
AC008878.3-201ENST00000617428 CUX2O14529 1486 aa24.52■■□□□ 1.52
AC008878.3-201ENST00000617428 SIN3AQ96ST3 1273 aa24.52■■□□□ 1.52
AC008878.3-201ENST00000617428 CCNB3Q8WWL7 1395 aa24.52■■□□□ 1.52
AC008878.3-201ENST00000617428 MLECQ14165 292 aa24.51■■□□□ 1.51
AC008878.3-201ENST00000617428 ANP32BQ92688 251 aaKnown RBP24.49■■□□□ 1.51
AC008878.3-201ENST00000617428 ARXQ96QS3 562 aa24.45■■□□□ 1.5
AC008878.3-201ENST00000617428 EIF4G1Q04637 1599 aaKnown RBP24.44■■□□□ 1.5
AC008878.3-201ENST00000617428 NEUROD2Q15784 382 aa24.44■■□□□ 1.5
AC008878.3-201ENST00000617428 FHAD1B1AJZ9 1412 aa24.41■■□□□ 1.5
AC008878.3-201ENST00000617428 SOGA1O94964 1423 aa24.4■■□□□ 1.5
AC008878.3-201ENST00000617428 TNNT2P45379 298 aaPredicted RBP24.4■■□□□ 1.5
AC008878.3-201ENST00000617428 DCAF11Q8TEB1 546 aa24.37■■□□□ 1.49
AC008878.3-201ENST00000617428 GGT6Q6P531 493 aa24.35■■□□□ 1.49
AC008878.3-201ENST00000617428 TDRD9Q8NDG6 1382 aaKnown RBP24.33■■□□□ 1.49
AC008878.3-201ENST00000617428 LAS1LQ9Y4W2 734 aaKnown RBP24.33■■□□□ 1.49
AC008878.3-201ENST00000617428 NUDCQ9Y266 331 aa24.33■■□□□ 1.49
AC008878.3-201ENST00000617428 MAPK8IP3Q9UPT6 1336 aa24.33■■□□□ 1.48
AC008878.3-201ENST00000617428 KANK1Q14678 1352 aa24.28■■□□□ 1.48
AC008878.3-201ENST00000617428 PDS5BQ9NTI5 1447 aa24.28■■□□□ 1.48
AC008878.3-201ENST00000617428 CC2D1BQ5T0F9 858 aaKnown RBP24.28■■□□□ 1.48
AC008878.3-201ENST00000617428 U2SURPO15042 1029 aaKnown RBP24.25■■□□□ 1.47
AC008878.3-201ENST00000617428 SAFB2Q14151 953 aaKnown RBP eCLIP24.25■■□□□ 1.47
AC008878.3-201ENST00000617428 HDGFP51858 240 aaKnown RBP24.24■■□□□ 1.47
AC008878.3-201ENST00000617428 SOX12O15370 315 aa24.23■■□□□ 1.47
AC008878.3-201ENST00000617428 FTSJ3Q8IY81 847 aaKnown RBP24.23■■□□□ 1.47
AC008878.3-201ENST00000617428 NBR1Q14596 966 aa24.23■■□□□ 1.47
AC008878.3-201ENST00000617428 CCDC88BA6NC98 1476 aa24.22■■□□□ 1.47
AC008878.3-201ENST00000617428 MROH2BQ7Z745 1585 aa24.22■■□□□ 1.47
AC008878.3-201ENST00000617428 CARMIL2Q6F5E8 1435 aa24.21■■□□□ 1.47
AC008878.3-201ENST00000617428 SRPK2P78362 688 aaKnown RBP24.21■■□□□ 1.47
AC008878.3-201ENST00000617428 TMF1P82094 1093 aa24.21■■□□□ 1.47
AC008878.3-201ENST00000617428 PKD2Q13563 968 aa24.18■■□□□ 1.46
AC008878.3-201ENST00000617428 SUPT16HQ9Y5B9 1047 aaKnown RBP24.18■■□□□ 1.46
AC008878.3-201ENST00000617428 KANK4Q5T7N3 995 aaPredicted RBP24.17■■□□□ 1.46
AC008878.3-201ENST00000617428 EFCAB2Q5VUJ9 269 aa24.15■■□□□ 1.46
AC008878.3-201ENST00000617428 FRAT1Q92837 279 aaPredicted RBP24.15■■□□□ 1.46
AC008878.3-201ENST00000617428 STK26Q9P289 416 aa24.15■■□□□ 1.46
AC008878.3-201ENST00000617428 FOXD1Q16676 465 aa24.14■■□□□ 1.46
AC008878.3-201ENST00000617428 SMARCA2P51531 1590 aa24.1■■□□□ 1.45
AC008878.3-201ENST00000617428 NPHP1O15259 732 aa24.09■■□□□ 1.45
AC008878.3-201ENST00000617428 ABCC8Q09428 1581 aa24.09■■□□□ 1.45
AC008878.3-201ENST00000617428 VPS8Q8N3P4 1428 aa24.07■■□□□ 1.44
AC008878.3-201ENST00000617428 BECN1Q14457 450 aa24.06■■□□□ 1.44
AC008878.3-201ENST00000617428 ARHGAP35Q9NRY4 1499 aa24.06■■□□□ 1.44
AC008878.3-201ENST00000617428 MORC1Q86VD1 984 aa24.05■■□□□ 1.44
AC008878.3-201ENST00000617428 TIMELESSQ9UNS1 1208 aa24.04■■□□□ 1.44
AC008878.3-201ENST00000617428 SETD5Q9C0A6 1442 aa24.03■■□□□ 1.44
AC008878.3-201ENST00000617428 EIF5BO60841 1220 aaKnown RBP24.02■■□□□ 1.44
AC008878.3-201ENST00000617428 PNNQ9H307 717 aaKnown RBP24.02■■□□□ 1.44
AC008878.3-201ENST00000617428 NUP155O75694 1391 aa24.01■■□□□ 1.43
AC008878.3-201ENST00000617428 CADPSQ9ULU8 1353 aa24.01■■□□□ 1.43
AC008878.3-201ENST00000617428 KIF3BO15066 747 aa24.01■■□□□ 1.43
AC008878.3-201ENST00000617428 RGS3P49796 1198 aa24■■□□□ 1.43
AC008878.3-201ENST00000617428 FMN1Q68DA7 1419 aa23.99■■□□□ 1.43
AC008878.3-201ENST00000617428 CASC1Q6TDU7 716 aa23.98■■□□□ 1.43
AC008878.3-201ENST00000617428 HSPA5P11021 654 aaKnown RBP23.98■■□□□ 1.43
AC008878.3-201ENST00000617428 NCLP19338 710 aaKnown RBP23.97■■□□□ 1.43
AC008878.3-201ENST00000617428 OS9Q13438 667 aaPredicted RBP23.97■■□□□ 1.43
AC008878.3-201ENST00000617428 HNRNPMP52272 730 aaKnown RBP eCLIP23.96■■□□□ 1.433e-8■■■□□ 18.2
AC008878.3-201ENST00000617428 MPHOSPH9Q99550 1183 aa23.96■■□□□ 1.43
AC008878.3-201ENST00000617428 JPH4Q96JJ6 628 aa23.96■■□□□ 1.43
AC008878.3-201ENST00000617428 DDRGK1Q96HY6 314 aa23.95■■□□□ 1.42
AC008878.3-201ENST00000617428 PAK3O75914 559 aaPredicted RBP23.94■■□□□ 1.42
AC008878.3-201ENST00000617428 HDGFL2Q7Z4V5 671 aaPredicted RBP23.93■■□□□ 1.42
AC008878.3-201ENST00000617428 ANKRD30AQ9BXX3 1397 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms