RNA–Protein interactions for RNA: ENST00000616768.4

MLH1-223, Transcript of mutL homolog 1, human

TSL 2

Gene MLH1, Length 721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MLH1-223	ENST00000616768	CCDC61	Q9Y6R9	512 aa		12.28	□□□□□ -0.44
MLH1-223	ENST00000616768	IFNLR1	Q8IU57	520 aa	Predicted RBP	12.27	□□□□□ -0.45
MLH1-223	ENST00000616768	KLHL34	Q8N239	644 aa		12.25	□□□□□ -0.45
MLH1-223	ENST00000616768	TSPYL2	Q9H2G4	693 aa	Predicted RBP	12.25	□□□□□ -0.45
MLH1-223	ENST00000616768	FAM212A	Q96EL1	285 aa		12.23	□□□□□ -0.45
MLH1-223	ENST00000616768	PHF12	Q96QT6	1004 aa		12.2	□□□□□ -0.46
MLH1-223	ENST00000616768	SPOCK2	Q92563	424 aa		12.19	□□□□□ -0.46
MLH1-223	ENST00000616768	KIF12	Q96FN5	646 aa		12.17	□□□□□ -0.46
MLH1-223	ENST00000616768	SGIP1	Q9BQI5	828 aa		12.16	□□□□□ -0.46
MLH1-223	ENST00000616768	GSE1	Q14687	1217 aa		12.15	□□□□□ -0.46
MLH1-223	ENST00000616768	GALR2	O43603	387 aa	Predicted RBP	12.13	□□□□□ -0.47
MLH1-223	ENST00000616768	DCAF8	Q5TAQ9	597 aa		12.11	□□□□□ -0.47
MLH1-223	ENST00000616768	MS4A3	Q96HJ5	214 aa		12.09	□□□□□ -0.47
MLH1-223	ENST00000616768	MAP3K13	O43283	966 aa		12.08	□□□□□ -0.48
MLH1-223	ENST00000616768	CHRM1	P11229	460 aa	Predicted RBP	12.08	□□□□□ -0.48
MLH1-223	ENST00000616768	DCBLD2	Q96PD2	775 aa		12.06	□□□□□ -0.48
MLH1-223	ENST00000616768	POTEI	P0CG38	1075 aa		12.05	□□□□□ -0.48
MLH1-223	ENST00000616768	TRIM41	Q8WV44	630 aa		12.01	□□□□□ -0.49
MLH1-223	ENST00000616768	PCDHB13	Q9Y5F0	798 aa		12.01	□□□□□ -0.49
MLH1-223	ENST00000616768	ASTL	Q6HA08	431 aa	Predicted RBP	12	□□□□□ -0.49
MLH1-223	ENST00000616768	PYGB	P11216	843 aa		11.98	□□□□□ -0.49
MLH1-223	ENST00000616768	TIE1	P35590	1138 aa		11.98	□□□□□ -0.49
MLH1-223	ENST00000616768	IFNL1	Q8IU54	200 aa		11.96	□□□□□ -0.49
MLH1-223	ENST00000616768	ATMIN	O43313	823 aa	Predicted RBP	11.95	□□□□□ -0.5
MLH1-223	ENST00000616768	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.95	□□□□□ -0.5
MLH1-223	ENST00000616768	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.93	□□□□□ -0.5
MLH1-223	ENST00000616768	CCDC180	Q9P1Z9	1646 aa		11.92	□□□□□ -0.5
MLH1-223	ENST00000616768	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.91	□□□□□ -0.5
MLH1-223	ENST00000616768	TRPC6	Q9Y210	931 aa		11.9	□□□□□ -0.5
MLH1-223	ENST00000616768	TTLL13P	A6NNM8	815 aa		11.88	□□□□□ -0.51
MLH1-223	ENST00000616768	ATN1	P54259	1190 aa	Predicted RBP	11.86	□□□□□ -0.51
MLH1-223	ENST00000616768	PELP1	Q8IZL8	1130 aa	Known RBP	11.86	□□□□□ -0.51
MLH1-223	ENST00000616768	C7	P10643	843 aa		11.85	□□□□□ -0.51
MLH1-223	ENST00000616768	SLC39A7	Q92504	469 aa		11.85	□□□□□ -0.51
MLH1-223	ENST00000616768	PCDHB8	Q9UN66	801 aa		11.84	□□□□□ -0.51
MLH1-223	ENST00000616768	IER5L	Q5T953	404 aa		11.81	□□□□□ -0.52
MLH1-223	ENST00000616768	TMEM106C	Q9BVX2	250 aa		11.81	□□□□□ -0.52
MLH1-223	ENST00000616768	RB1CC1	Q8TDY2	1594 aa		11.79	□□□□□ -0.52
MLH1-223	ENST00000616768	PDAP1	Q13442	181 aa	Known RBP	11.78	□□□□□ -0.52
MLH1-223	ENST00000616768	TRIM35	Q9UPQ4	493 aa		11.78	□□□□□ -0.52
MLH1-223	ENST00000616768	PKD2	Q13563	968 aa		11.77	□□□□□ -0.53
MLH1-223	ENST00000616768	LHX8	Q68G74	356 aa		11.77	□□□□□ -0.53
MLH1-223	ENST00000616768	METRN	Q9UJH8	293 aa		11.77	□□□□□ -0.53
MLH1-223	ENST00000616768	PSEN1	P49768	467 aa		11.76	□□□□□ -0.53
MLH1-223	ENST00000616768	RIOK3	O14730	519 aa	Known RBP	11.74	□□□□□ -0.53
MLH1-223	ENST00000616768	RNF25	Q96BH1	459 aa	Predicted RBP	11.73	□□□□□ -0.53
MLH1-223	ENST00000616768	TAOK2	Q9UL54	1235 aa		11.7	□□□□□ -0.54
MLH1-223	ENST00000616768	VGF	O15240	615 aa	Predicted RBP	11.69	□□□□□ -0.54
MLH1-223	ENST00000616768	ECM2	O94769	699 aa	Predicted RBP	11.69	□□□□□ -0.54
MLH1-223	ENST00000616768	POTEF	A5A3E0	1075 aa		11.67	□□□□□ -0.54
MLH1-223	ENST00000616768	IRX5	P78411	483 aa	Predicted RBP	11.66	□□□□□ -0.54
MLH1-223	ENST00000616768	CECR2	Q9BXF3	1484 aa		11.65	□□□□□ -0.54
MLH1-223	ENST00000616768	POTEB2	H3BUK9	544 aa		11.65	□□□□□ -0.54
MLH1-223	ENST00000616768	SEC24B	O95487	1268 aa		11.63	□□□□□ -0.55
MLH1-223	ENST00000616768	ILDR1	Q86SU0	546 aa	Predicted RBP	11.63	□□□□□ -0.55
MLH1-223	ENST00000616768	COLQ	Q9Y215	455 aa	Predicted RBP	11.63	□□□□□ -0.55
MLH1-223	ENST00000616768	GOLGA2	Q08379	1002 aa		11.62	□□□□□ -0.55
MLH1-223	ENST00000616768	OCEL1	Q9H607	264 aa		11.62	□□□□□ -0.55
MLH1-223	ENST00000616768	MKRN3	Q13064	507 aa	Known RBP	11.61	□□□□□ -0.55
MLH1-223	ENST00000616768	UNC13A	Q9UPW8	1703 aa		11.6	□□□□□ -0.55
MLH1-223	ENST00000616768	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.59	□□□□□ -0.55
MLH1-223	ENST00000616768	RGL2	O15211	777 aa		11.59	□□□□□ -0.55
MLH1-223	ENST00000616768	PLCG2	P16885	1265 aa		11.59	□□□□□ -0.55
MLH1-223	ENST00000616768	MAMSTR	Q6ZN01	415 aa		11.59	□□□□□ -0.55
MLH1-223	ENST00000616768	ZFP91	Q96JP5	570 aa	Predicted RBP	11.59	□□□□□ -0.55
MLH1-223	ENST00000616768	POTEJ	P0CG39	1038 aa		11.57	□□□□□ -0.56
MLH1-223	ENST00000616768	CABP2	Q9NPB3	220 aa		11.57	□□□□□ -0.56
MLH1-223	ENST00000616768	CC2D2A	Q9P2K1	1620 aa		11.57	□□□□□ -0.56
MLH1-223	ENST00000616768	OTUD5	Q96G74	571 aa		11.55	□□□□□ -0.56
MLH1-223	ENST00000616768	PDCD7	Q8N8D1	485 aa	Known RBP	11.54	□□□□□ -0.56
MLH1-223	ENST00000616768	SOX12	O15370	315 aa		11.52	□□□□□ -0.57
MLH1-223	ENST00000616768	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.52	□□□□□ -0.57	3e-11	■■■■■ 43.1
MLH1-223	ENST00000616768	BICRA	Q9NZM4	1560 aa		11.52	□□□□□ -0.57
MLH1-223	ENST00000616768	EFCAB3	Q8N7B9	438 aa		11.5	□□□□□ -0.57
MLH1-223	ENST00000616768	SCUBE2	Q9NQ36	999 aa		11.5	□□□□□ -0.57
MLH1-223	ENST00000616768	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.49	□□□□□ -0.57
MLH1-223	ENST00000616768	STK25	O00506	426 aa		11.47	□□□□□ -0.57
MLH1-223	ENST00000616768	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.47	□□□□□ -0.57
MLH1-223	ENST00000616768	NACAD	O15069	1562 aa		11.45	□□□□□ -0.58
MLH1-223	ENST00000616768	STK24	Q9Y6E0	443 aa		11.45	□□□□□ -0.58
MLH1-223	ENST00000616768	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.43	□□□□□ -0.58
MLH1-223	ENST00000616768	HS6ST3	Q8IZP7	471 aa		11.43	□□□□□ -0.58
MLH1-223	ENST00000616768	NLRP6	P59044	892 aa		11.39	□□□□□ -0.59
MLH1-223	ENST00000616768	FBXO22	Q8NEZ5	403 aa		11.38	□□□□□ -0.59
MLH1-223	ENST00000616768	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.38	□□□□□ -0.59
MLH1-223	ENST00000616768	CUX2	O14529	1486 aa		11.37	□□□□□ -0.59
MLH1-223	ENST00000616768	DPY19L2	Q6NUT2	758 aa		11.36	□□□□□ -0.59
MLH1-223	ENST00000616768	MS4A4A	Q96JQ5	239 aa		11.36	□□□□□ -0.59
MLH1-223	ENST00000616768	MFRP	Q9BY79	579 aa		11.36	□□□□□ -0.59
MLH1-223	ENST00000616768	PHF8	Q9UPP1	1060 aa		11.36	□□□□□ -0.59
MLH1-223	ENST00000616768	BOLA1	Q9Y3E2	137 aa		11.36	□□□□□ -0.59
MLH1-223	ENST00000616768	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.34	□□□□□ -0.59
MLH1-223	ENST00000616768	DCAF8L2	P0C7V8	631 aa		11.33	□□□□□ -0.6
MLH1-223	ENST00000616768	CHGA	P10645	457 aa	Known RBP	11.32	□□□□□ -0.6
MLH1-223	ENST00000616768	C3orf67	Q6ZVT6	689 aa		11.31	□□□□□ -0.6
MLH1-223	ENST00000616768	EIF4G1	Q04637	1599 aa	Known RBP	11.3	□□□□□ -0.6
MLH1-223	ENST00000616768		G3V3G9	751 aa		11.3	□□□□□ -0.6
MLH1-223	ENST00000616768	SLAIN1	Q8ND83	568 aa		11.29	□□□□□ -0.6
MLH1-223	ENST00000616768	RTN4	Q9NQC3	1192 aa	Known RBP	11.28	□□□□□ -0.6
MLH1-223	ENST00000616768	MICALL2	Q8IY33	904 aa		11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms