RNA–Protein interactions for RNA: ENST00000616684.4

CDH23-212, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 4,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-212ENST00000616684 BAZ1BQ9UIG0 1483 aaKnown RBP25.11■■□□□ 1.61
CDH23-212ENST00000616684 KIF27Q86VH2 1401 aa25.08■■□□□ 1.61
CDH23-212ENST00000616684 CEP164Q9UPV0 1460 aa25.08■■□□□ 1.61
CDH23-212ENST00000616684 WDR43Q15061 677 aaKnown RBP eCLIP25.03■■□□□ 1.6
CDH23-212ENST00000616684 CECR2Q9BXF3 1484 aa25.01■■□□□ 1.59
CDH23-212ENST00000616684 IRX6P78412 446 aaPredicted RBP25.01■■□□□ 1.59
CDH23-212ENST00000616684 PLEKHD1A6NEE1 506 aa24.99■■□□□ 1.59
CDH23-212ENST00000616684 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.98■■□□□ 1.59
CDH23-212ENST00000616684 UPF2Q9HAU5 1272 aaKnown RBP24.97■■□□□ 1.59
CDH23-212ENST00000616684 BAZ1AQ9NRL2 1556 aaPredicted RBP24.97■■□□□ 1.59
CDH23-212ENST00000616684 PLPPR3Q6T4P5 718 aa24.93■■□□□ 1.58
CDH23-212ENST00000616684 HSP90AA1P07900 732 aaKnown RBP24.92■■□□□ 1.58
CDH23-212ENST00000616684 KCNH8Q96L42 1107 aa24.92■■□□□ 1.58
CDH23-212ENST00000616684 CFDP1Q9UEE9 299 aaPredicted RBP24.89■■□□□ 1.57
CDH23-212ENST00000616684 RGL3Q3MIN7 710 aa24.88■■□□□ 1.57
CDH23-212ENST00000616684 SIN3AQ96ST3 1273 aa24.86■■□□□ 1.57
CDH23-212ENST00000616684 SOGA1O94964 1423 aa24.84■■□□□ 1.57
CDH23-212ENST00000616684 NBR1Q14596 966 aa24.77■■□□□ 1.56
CDH23-212ENST00000616684 CCNB3Q8WWL7 1395 aa24.76■■□□□ 1.55
CDH23-212ENST00000616684 SENP3-EIF4A1A0A087X0R7 540 aa24.73■■□□□ 1.55
CDH23-212ENST00000616684 ANP32BQ92688 251 aaKnown RBP24.73■■□□□ 1.55
CDH23-212ENST00000616684 CARD11Q9BXL7 1154 aa24.73■■□□□ 1.55
CDH23-212ENST00000616684 SENP3Q9H4L4 574 aaPredicted RBP24.71■■□□□ 1.55
CDH23-212ENST00000616684 CARMIL1Q5VZK9 1371 aa24.69■■□□□ 1.54
CDH23-212ENST00000616684 SUPT16HQ9Y5B9 1047 aaKnown RBP24.69■■□□□ 1.54
CDH23-212ENST00000616684 FHAD1B1AJZ9 1412 aa24.68■■□□□ 1.54
CDH23-212ENST00000616684 MROH2BQ7Z745 1585 aa24.66■■□□□ 1.54
CDH23-212ENST00000616684 CUX2O14529 1486 aa24.65■■□□□ 1.54
CDH23-212ENST00000616684 KNSTRNQ9Y448 316 aa24.63■■□□□ 1.53
CDH23-212ENST00000616684 CDCA8Q53HL2 280 aa24.63■■□□□ 1.53
CDH23-212ENST00000616684 VPS8Q8N3P4 1428 aa24.6■■□□□ 1.53
CDH23-212ENST00000616684 CCDC88BA6NC98 1476 aa24.6■■□□□ 1.53
CDH23-212ENST00000616684 PPP1R15AO75807 674 aaPredicted RBP24.59■■□□□ 1.53
CDH23-212ENST00000616684 EIF5BO60841 1220 aaKnown RBP24.58■■□□□ 1.53
CDH23-212ENST00000616684 TIMELESSQ9UNS1 1208 aa24.55■■□□□ 1.52
CDH23-212ENST00000616684 ABCC8Q09428 1581 aa24.55■■□□□ 1.52
CDH23-212ENST00000616684 MYH16Q9H6N6 1097 aa24.55■■□□□ 1.52
CDH23-212ENST00000616684 CFAP53Q96M91 514 aa24.54■■□□□ 1.52
CDH23-212ENST00000616684 KANK4Q5T7N3 995 aaPredicted RBP24.54■■□□□ 1.52
CDH23-212ENST00000616684 ARXQ96QS3 562 aa24.51■■□□□ 1.51
CDH23-212ENST00000616684 SETD5Q9C0A6 1442 aa24.46■■□□□ 1.51
CDH23-212ENST00000616684 PPP4R2Q9NY27 417 aa24.45■■□□□ 1.5
CDH23-212ENST00000616684 ERCC6Q03468 1493 aa24.44■■□□□ 1.5
CDH23-212ENST00000616684 NEUROD2Q15784 382 aa24.44■■□□□ 1.5
CDH23-212ENST00000616684 DDRGK1Q96HY6 314 aa24.43■■□□□ 1.5
CDH23-212ENST00000616684 DCAF11Q8TEB1 546 aa24.43■■□□□ 1.5
CDH23-212ENST00000616684 EIF4G1Q04637 1599 aaKnown RBP24.42■■□□□ 1.5
CDH23-212ENST00000616684 PPM1GO15355 546 aaPredicted RBP24.41■■□□□ 1.5
CDH23-212ENST00000616684 C14orf37Q86TY3 774 aa24.41■■□□□ 1.5
CDH23-212ENST00000616684 BECN1Q14457 450 aa24.4■■□□□ 1.5
CDH23-212ENST00000616684 PLEKHG5O94827 1062 aa24.39■■□□□ 1.49
CDH23-212ENST00000616684 CC2D1BQ5T0F9 858 aaKnown RBP24.38■■□□□ 1.49
CDH23-212ENST00000616684 ARHGAP35Q9NRY4 1499 aa24.37■■□□□ 1.49
CDH23-212ENST00000616684 ZBTB7CA1YPR0 619 aa24.37■■□□□ 1.49
CDH23-212ENST00000616684 CCER2I3L3R5 266 aa24.35■■□□□ 1.49
CDH23-212ENST00000616684 HSPA5P11021 654 aaKnown RBP24.33■■□□□ 1.49
CDH23-212ENST00000616684 FTSJ3Q8IY81 847 aaKnown RBP24.33■■□□□ 1.48
CDH23-212ENST00000616684 TNNT2P45379 298 aaPredicted RBP24.32■■□□□ 1.48
CDH23-212ENST00000616684 TMF1P82094 1093 aa24.32■■□□□ 1.48
CDH23-212ENST00000616684 RAB3GAP2Q9H2M9 1393 aa24.31■■□□□ 1.48
CDH23-212ENST00000616684 NUDCQ9Y266 331 aa24.31■■□□□ 1.48
CDH23-212ENST00000616684 B4GALNT3Q6L9W6 998 aa24.31■■□□□ 1.48
CDH23-212ENST00000616684 MAPK8IP3Q9UPT6 1336 aa24.31■■□□□ 1.48
CDH23-212ENST00000616684 POGKQ9P215 609 aa24.31■■□□□ 1.48
CDH23-212ENST00000616684 SMARCA2P51531 1590 aa24.31■■□□□ 1.48
CDH23-212ENST00000616684 ARID4BQ4LE39 1312 aaPredicted RBP24.3■■□□□ 1.48
CDH23-212ENST00000616684 FOXD1Q16676 465 aa24.29■■□□□ 1.48
CDH23-212ENST00000616684 ANP32EQ9BTT0 268 aa24.29■■□□□ 1.48
CDH23-212ENST00000616684 PKD2Q13563 968 aa24.28■■□□□ 1.48
CDH23-212ENST00000616684 TDRD9Q8NDG6 1382 aaKnown RBP24.28■■□□□ 1.48
CDH23-212ENST00000616684 FRAT1Q92837 279 aaPredicted RBP24.27■■□□□ 1.48
CDH23-212ENST00000616684 RGS3P49796 1198 aa24.27■■□□□ 1.48
CDH23-212ENST00000616684 WIZO95785 1651 aa24.25■■□□□ 1.47
CDH23-212ENST00000616684 LAS1LQ9Y4W2 734 aaKnown RBP24.24■■□□□ 1.47
CDH23-212ENST00000616684 FMN1Q68DA7 1419 aa24.23■■□□□ 1.47
CDH23-212ENST00000616684 TOP2AP11388 1531 aaKnown RBP24.23■■□□□ 1.47
CDH23-212ENST00000616684 A0A0G2JS52 829 aa24.21■■□□□ 1.47
CDH23-212ENST00000616684 MPHOSPH9Q99550 1183 aa24.21■■□□□ 1.47
CDH23-212ENST00000616684 U2SURPO15042 1029 aaKnown RBP24.2■■□□□ 1.46
CDH23-212ENST00000616684 KANK1Q14678 1352 aa24.18■■□□□ 1.46
CDH23-212ENST00000616684 GOLGA6L22H0YM25 854 aa24.17■■□□□ 1.46
CDH23-212ENST00000616684 PDS5BQ9NTI5 1447 aa24.16■■□□□ 1.46
CDH23-212ENST00000616684 CARMIL2Q6F5E8 1435 aa24.13■■□□□ 1.45
CDH23-212ENST00000616684 RAPGEF2Q9Y4G8 1499 aa24.11■■□□□ 1.45
CDH23-212ENST00000616684 NCLP19338 710 aaKnown RBP24.1■■□□□ 1.45
CDH23-212ENST00000616684 NOP58Q9Y2X3 529 aaKnown RBP24.1■■□□□ 1.45
CDH23-212ENST00000616684 NUP155O75694 1391 aa24.1■■□□□ 1.45
CDH23-212ENST00000616684 MS4A1P11836 297 aa24.09■■□□□ 1.45
CDH23-212ENST00000616684 MORC1Q86VD1 984 aa24.08■■□□□ 1.44
CDH23-212ENST00000616684 FHOD3Q2V2M9 1422 aa24.07■■□□□ 1.44
CDH23-212ENST00000616684 CASC1Q6TDU7 716 aa24.07■■□□□ 1.44
CDH23-212ENST00000616684 TRIM44Q96DX7 344 aaPredicted RBP24.07■■□□□ 1.44
CDH23-212ENST00000616684 CADPSQ9ULU8 1353 aa24.07■■□□□ 1.44
CDH23-212ENST00000616684 SRPK2P78362 688 aaKnown RBP24.07■■□□□ 1.44
CDH23-212ENST00000616684 GGT6Q6P531 493 aa24.07■■□□□ 1.44
CDH23-212ENST00000616684 KTN1Q86UP2 1357 aaKnown RBP24.05■■□□□ 1.44
CDH23-212ENST00000616684 L3MBTL2Q969R5 705 aa24.05■■□□□ 1.44
CDH23-212ENST00000616684 SAFB2Q14151 953 aaKnown RBP eCLIP24.05■■□□□ 1.44
CDH23-212ENST00000616684 CHMP4BQ9H444 224 aaKnown RBP24.05■■□□□ 1.44
CDH23-212ENST00000616684 ANKRD30AQ9BXX3 1397 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms