RNA–Protein interactions for RNA: ENST00000615301.4

SHTN1-207, Transcript of shootin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHTN1, Length 6,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-207ENST00000615301 NAP1L5Q96NT1 182 aaPredicted RBP13.03□□□□□ -0.32
SHTN1-207ENST00000615301 BECN1Q14457 450 aa13.02□□□□□ -0.32
SHTN1-207ENST00000615301 DDRGK1Q96HY6 314 aa13.02□□□□□ -0.32
SHTN1-207ENST00000615301 ESF1Q9H501 851 aaKnown RBP13.01□□□□□ -0.33
SHTN1-207ENST00000615301 MYH16Q9H6N6 1097 aa13.01□□□□□ -0.33
SHTN1-207ENST00000615301 PTMAP06454 111 aaKnown RBP13□□□□□ -0.33
SHTN1-207ENST00000615301 EIF4G2P78344 907 aaKnown RBP eCLIP12.99□□□□□ -0.335e-23■■■■■ 59.6
SHTN1-207ENST00000615301 DNTTIP2Q5QJE6 756 aaKnown RBP12.99□□□□□ -0.33
SHTN1-207ENST00000615301 RRP7BPQ9NSQ0 103 aa12.98□□□□□ -0.33
SHTN1-207ENST00000615301 RGS3P49796 1198 aa12.97□□□□□ -0.33
SHTN1-207ENST00000615301 A0A0G2JS52 829 aa12.96□□□□□ -0.34
SHTN1-207ENST00000615301 GOLGA6L22H0YM25 854 aa12.96□□□□□ -0.34
SHTN1-207ENST00000615301 ZBTB7CA1YPR0 619 aa12.95□□□□□ -0.34
SHTN1-207ENST00000615301 B4GALNT3Q6L9W6 998 aa12.94□□□□□ -0.34
SHTN1-207ENST00000615301 NOP58Q9Y2X3 529 aaKnown RBP12.94□□□□□ -0.34
SHTN1-207ENST00000615301 ERICH6BQ5W0A0 696 aa12.94□□□□□ -0.34
SHTN1-207ENST00000615301 NEUROD2Q15784 382 aa12.94□□□□□ -0.34
SHTN1-207ENST00000615301 PLCB2Q00722 1185 aa12.93□□□□□ -0.34
SHTN1-207ENST00000615301 ARID4BQ4LE39 1312 aaPredicted RBP12.93□□□□□ -0.34
SHTN1-207ENST00000615301 TNNT2P45379 298 aaPredicted RBP12.93□□□□□ -0.34
SHTN1-207ENST00000615301 CDK11BP21127 795 aaKnown RBP12.92□□□□□ -0.34
SHTN1-207ENST00000615301 PPM1GO15355 546 aaPredicted RBP12.92□□□□□ -0.34
SHTN1-207ENST00000615301 RGL3Q3MIN7 710 aa12.92□□□□□ -0.34
SHTN1-207ENST00000615301 TAOK2Q9UL54 1235 aa12.92□□□□□ -0.34
SHTN1-207ENST00000615301 AMER1Q5JTC6 1135 aaPredicted RBP12.91□□□□□ -0.34
SHTN1-207ENST00000615301 TSPY4P0CV99 314 aa12.89□□□□□ -0.35
SHTN1-207ENST00000615301 TSPY10P0CW01 314 aa12.89□□□□□ -0.35
SHTN1-207ENST00000615301 DEKP35659 375 aaKnown RBP12.89□□□□□ -0.35
SHTN1-207ENST00000615301 MTUS2Q5JR59 1369 aa12.88□□□□□ -0.35
SHTN1-207ENST00000615301 PPP4R2Q9NY27 417 aa12.88□□□□□ -0.35
SHTN1-207ENST00000615301 FRAT1Q92837 279 aaPredicted RBP12.87□□□□□ -0.35
SHTN1-207ENST00000615301 MYO15BQ96JP2 1530 aa12.86□□□□□ -0.35
SHTN1-207ENST00000615301 C14orf37Q86TY3 774 aa12.86□□□□□ -0.35
SHTN1-207ENST00000615301 TULP1O00294 542 aaPredicted RBP12.86□□□□□ -0.35
SHTN1-207ENST00000615301 SPRYD3Q8NCJ5 442 aa12.85□□□□□ -0.35
SHTN1-207ENST00000615301 FTSJ3Q8IY81 847 aaKnown RBP12.85□□□□□ -0.35
SHTN1-207ENST00000615301 SIN3AQ96ST3 1273 aa12.85□□□□□ -0.35
SHTN1-207ENST00000615301 ZRSR1Q15695 479 aaKnown RBP12.84□□□□□ -0.35
SHTN1-207ENST00000615301 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.82□□□□□ -0.36
SHTN1-207ENST00000615301 CLIP1P30622 1438 aa12.82□□□□□ -0.36
SHTN1-207ENST00000615301 ARID3AQ99856 593 aa12.81□□□□□ -0.36
SHTN1-207ENST00000615301 RBM19Q9Y4C8 960 aaKnown RBP12.81□□□□□ -0.36
SHTN1-207ENST00000615301 KNSTRNQ9Y448 316 aa12.79□□□□□ -0.36
SHTN1-207ENST00000615301 HSP90AB1P08238 724 aaKnown RBP12.79□□□□□ -0.36
SHTN1-207ENST00000615301 CC2D1BQ5T0F9 858 aaKnown RBP12.78□□□□□ -0.36
SHTN1-207ENST00000615301 CARD11Q9BXL7 1154 aa12.78□□□□□ -0.36
SHTN1-207ENST00000615301 NPM1P06748 294 aaKnown RBP eCLIP12.77□□□□□ -0.36
SHTN1-207ENST00000615301 CASC1Q6TDU7 716 aa12.77□□□□□ -0.37
SHTN1-207ENST00000615301 CFAP53Q96M91 514 aa12.75□□□□□ -0.37
SHTN1-207ENST00000615301 KCNH8Q96L42 1107 aa12.75□□□□□ -0.37
SHTN1-207ENST00000615301 PPP1R15AO75807 674 aaPredicted RBP12.73□□□□□ -0.37
SHTN1-207ENST00000615301 GZF1Q9H116 711 aaPredicted RBP12.72□□□□□ -0.37
SHTN1-207ENST00000615301 NAP1L2Q9ULW6 460 aaPredicted RBP12.72□□□□□ -0.37
SHTN1-207ENST00000615301 CEP162Q5TB80 1403 aa12.71□□□□□ -0.37
SHTN1-207ENST00000615301 MAPK8IP3Q9UPT6 1336 aa12.71□□□□□ -0.38
SHTN1-207ENST00000615301 SCRIBQ14160 1630 aa12.7□□□□□ -0.38
SHTN1-207ENST00000615301 MSNP26038 577 aaKnown RBP12.69□□□□□ -0.38
SHTN1-207ENST00000615301 U2SURPO15042 1029 aaKnown RBP12.69□□□□□ -0.38
SHTN1-207ENST00000615301 FGD1P98174 961 aa12.69□□□□□ -0.38
SHTN1-207ENST00000615301 ZCCHC6Q5VYS8 1495 aaKnown RBP12.69□□□□□ -0.38
SHTN1-207ENST00000615301 HSCBQ8IWL3 235 aa12.68□□□□□ -0.38
SHTN1-207ENST00000615301 SLKQ9H2G2 1235 aaPredicted RBP12.68□□□□□ -0.38
SHTN1-207ENST00000615301 KCNJ4P48050 445 aa12.67□□□□□ -0.38
SHTN1-207ENST00000615301 OS9Q13438 667 aaPredicted RBP12.66□□□□□ -0.38
SHTN1-207ENST00000615301 APBB1O00213 710 aa12.65□□□□□ -0.38
SHTN1-207ENST00000615301 TSHZ2Q9NRE2 1034 aa12.65□□□□□ -0.38
SHTN1-207ENST00000615301 L1TD1Q5T7N2 865 aaKnown RBP12.64□□□□□ -0.39
SHTN1-207ENST00000615301 GOLGA6L4A6NEF3 574 aa12.64□□□□□ -0.39
SHTN1-207ENST00000615301 CHMP7Q8WUX9 453 aaPredicted RBP12.64□□□□□ -0.39
SHTN1-207ENST00000615301 CHAF1AQ13111 956 aaPredicted RBP12.63□□□□□ -0.39
SHTN1-207ENST00000615301 DRC7Q8IY82 874 aa12.63□□□□□ -0.39
SHTN1-207ENST00000615301 CDCA8Q53HL2 280 aa12.63□□□□□ -0.39
SHTN1-207ENST00000615301 LMOD2Q6P5Q4 547 aa12.62□□□□□ -0.39
SHTN1-207ENST00000615301 NUDCQ9Y266 331 aa12.62□□□□□ -0.39
SHTN1-207ENST00000615301 GOLGA6L6A8MZA4 724 aa12.62□□□□□ -0.39
SHTN1-207ENST00000615301 CFDP1Q9UEE9 299 aaPredicted RBP12.61□□□□□ -0.39
SHTN1-207ENST00000615301 SOX12O15370 315 aa12.61□□□□□ -0.39
SHTN1-207ENST00000615301 PLEKHD1A6NEE1 506 aa12.59□□□□□ -0.39
SHTN1-207ENST00000615301 HAP1P54257 671 aaPredicted RBP12.59□□□□□ -0.39
SHTN1-207ENST00000615301 PNNQ9H307 717 aaKnown RBP12.59□□□□□ -0.39
SHTN1-207ENST00000615301 NRDCO43847 1150 aa12.58□□□□□ -0.4
SHTN1-207ENST00000615301 POGKQ9P215 609 aa12.58□□□□□ -0.4
SHTN1-207ENST00000615301 DCAF11Q8TEB1 546 aa12.57□□□□□ -0.4
SHTN1-207ENST00000615301 GOLGA3Q08378 1498 aa12.57□□□□□ -0.4
SHTN1-207ENST00000615301 CCDC180Q9P1Z9 1646 aa12.56□□□□□ -0.4
SHTN1-207ENST00000615301 NCBP3Q53F19 620 aaKnown RBP12.56□□□□□ -0.4
SHTN1-207ENST00000615301 HSPA5P11021 654 aaKnown RBP12.56□□□□□ -0.4
SHTN1-207ENST00000615301 RSF1Q96T23 1441 aaPredicted RBP12.55□□□□□ -0.4
SHTN1-207ENST00000615301 SAFB2Q14151 953 aaKnown RBP eCLIP12.55□□□□□ -0.4
SHTN1-207ENST00000615301 FOXD4L1Q9NU39 408 aa12.55□□□□□ -0.4
SHTN1-207ENST00000615301 FOXD1Q16676 465 aa12.53□□□□□ -0.4
SHTN1-207ENST00000615301 MS4A1P11836 297 aa12.53□□□□□ -0.4
SHTN1-207ENST00000615301 CCER2I3L3R5 266 aa12.52□□□□□ -0.4
SHTN1-207ENST00000615301 MFAP1P55081 439 aaKnown RBP12.52□□□□□ -0.41
SHTN1-207ENST00000615301 RCAN3Q9UKA8 241 aa12.52□□□□□ -0.41
SHTN1-207ENST00000615301 TMF1P82094 1093 aa12.51□□□□□ -0.41
SHTN1-207ENST00000615301 CHMP4BQ9H444 224 aaKnown RBP12.51□□□□□ -0.41
SHTN1-207ENST00000615301 MCCP23508 829 aa12.5□□□□□ -0.41
SHTN1-207ENST00000615301 NPHP1O15259 732 aa12.5□□□□□ -0.41
SHTN1-207ENST00000615301 KIAA2012Q0VF49 1180 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms