RNA–Protein interactions for RNA: ENST00000615287.4

CHRNA4-207, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA4, Length 5,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-207ENST00000615287 CEP162Q5TB80 1403 aa24.81■■□□□ 1.56
CHRNA4-207ENST00000615287 SALL2Q9Y467 1007 aaPredicted RBP24.79■■□□□ 1.56
CHRNA4-207ENST00000615287 A0A0G2JS52 829 aa24.78■■□□□ 1.56
CHRNA4-207ENST00000615287 ZBTB7CA1YPR0 619 aa24.78■■□□□ 1.56
CHRNA4-207ENST00000615287 HNRNPUQ00839 825 aaKnown RBP eCLIP24.78■■□□□ 1.56
CHRNA4-207ENST00000615287 CEP164Q9UPV0 1460 aa24.77■■□□□ 1.56
CHRNA4-207ENST00000615287 PLEKHG5O94827 1062 aa24.76■■□□□ 1.55
CHRNA4-207ENST00000615287 TRHP20396 242 aaPredicted RBP24.75■■□□□ 1.55
CHRNA4-207ENST00000615287 RGL3Q3MIN7 710 aa24.75■■□□□ 1.55
CHRNA4-207ENST00000615287 CECR2Q9BXF3 1484 aa24.75■■□□□ 1.55
CHRNA4-207ENST00000615287 EIF4G2P78344 907 aaKnown RBP eCLIP24.7■■□□□ 1.54
CHRNA4-207ENST00000615287 NPM2Q86SE8 214 aaKnown RBP24.68■■□□□ 1.54
CHRNA4-207ENST00000615287 HAP1P54257 671 aaPredicted RBP24.67■■□□□ 1.54
CHRNA4-207ENST00000615287 EIF4G1Q04637 1599 aaKnown RBP24.66■■□□□ 1.54
CHRNA4-207ENST00000615287 TNIKQ9UKE5 1360 aa24.66■■□□□ 1.54
CHRNA4-207ENST00000615287 CUX2O14529 1486 aa24.66■■□□□ 1.54
CHRNA4-207ENST00000615287 CARMIL1Q5VZK9 1371 aa24.64■■□□□ 1.53
CHRNA4-207ENST00000615287 MRS2Q9HD23 443 aa24.64■■□□□ 1.53
CHRNA4-207ENST00000615287 PDS5BQ9NTI5 1447 aa24.64■■□□□ 1.53
CHRNA4-207ENST00000615287 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.63■■□□□ 1.53
CHRNA4-207ENST00000615287 ANP32AP39687 249 aaKnown RBP24.6■■□□□ 1.53
CHRNA4-207ENST00000615287 CCNB3Q8WWL7 1395 aa24.6■■□□□ 1.53
CHRNA4-207ENST00000615287 HIRIP3Q9BW71 556 aaPredicted RBP24.57■■□□□ 1.52
CHRNA4-207ENST00000615287 CDCA8Q53HL2 280 aa24.57■■□□□ 1.52
CHRNA4-207ENST00000615287 SMARCA2P51531 1590 aa24.55■■□□□ 1.52
CHRNA4-207ENST00000615287 FHAD1B1AJZ9 1412 aa24.54■■□□□ 1.52
CHRNA4-207ENST00000615287 UPF2Q9HAU5 1272 aaKnown RBP24.54■■□□□ 1.52
CHRNA4-207ENST00000615287 FKBP8Q14318 412 aa24.52■■□□□ 1.52
CHRNA4-207ENST00000615287 HSP90AA1P07900 732 aaKnown RBP24.51■■□□□ 1.51
CHRNA4-207ENST00000615287 POGKQ9P215 609 aa24.5■■□□□ 1.51
CHRNA4-207ENST00000615287 MLECQ14165 292 aa24.48■■□□□ 1.51
CHRNA4-207ENST00000615287 CFAP53Q96M91 514 aa24.48■■□□□ 1.51
CHRNA4-207ENST00000615287 CARD11Q9BXL7 1154 aa24.47■■□□□ 1.51
CHRNA4-207ENST00000615287 CARMIL2Q6F5E8 1435 aa24.46■■□□□ 1.51
CHRNA4-207ENST00000615287 KANK1Q14678 1352 aa24.46■■□□□ 1.51
CHRNA4-207ENST00000615287 KNSTRNQ9Y448 316 aa24.44■■□□□ 1.5
CHRNA4-207ENST00000615287 LMOD2Q6P5Q4 547 aa24.43■■□□□ 1.5
CHRNA4-207ENST00000615287 SOGA1O94964 1423 aa24.43■■□□□ 1.5
CHRNA4-207ENST00000615287 MYH16Q9H6N6 1097 aa24.43■■□□□ 1.5
CHRNA4-207ENST00000615287 PPM1GO15355 546 aaPredicted RBP24.42■■□□□ 1.5
CHRNA4-207ENST00000615287 CCDC88BA6NC98 1476 aa24.41■■□□□ 1.5
CHRNA4-207ENST00000615287 HDGFP51858 240 aaKnown RBP24.41■■□□□ 1.5
CHRNA4-207ENST00000615287 MROH2BQ7Z745 1585 aa24.4■■□□□ 1.5
CHRNA4-207ENST00000615287 CCDC136Q96JN2 1154 aa24.38■■□□□ 1.49
CHRNA4-207ENST00000615287 TDRD9Q8NDG6 1382 aaKnown RBP24.37■■□□□ 1.49
CHRNA4-207ENST00000615287 MYO15BQ96JP2 1530 aa24.37■■□□□ 1.49
CHRNA4-207ENST00000615287 ARXQ96QS3 562 aa24.3■■□□□ 1.48
CHRNA4-207ENST00000615287 GGT6Q6P531 493 aa24.29■■□□□ 1.48
CHRNA4-207ENST00000615287 CADPSQ9ULU8 1353 aa24.26■■□□□ 1.47
CHRNA4-207ENST00000615287 NUDCQ9Y266 331 aa24.25■■□□□ 1.47
CHRNA4-207ENST00000615287 MAPK8IP3Q9UPT6 1336 aa24.23■■□□□ 1.47
CHRNA4-207ENST00000615287 EFCAB2Q5VUJ9 269 aa24.22■■□□□ 1.47
CHRNA4-207ENST00000615287 DCAF11Q8TEB1 546 aa24.21■■□□□ 1.47
CHRNA4-207ENST00000615287 SIN3AQ96ST3 1273 aa24.21■■□□□ 1.47
CHRNA4-207ENST00000615287 ANP32BQ92688 251 aaKnown RBP24.2■■□□□ 1.46
CHRNA4-207ENST00000615287 MIER1Q8N108 512 aa24.19■■□□□ 1.46
CHRNA4-207ENST00000615287 ABCC8Q09428 1581 aa24.18■■□□□ 1.46
CHRNA4-207ENST00000615287 ARHGAP35Q9NRY4 1499 aa24.16■■□□□ 1.46
CHRNA4-207ENST00000615287 TNNT2P45379 298 aaPredicted RBP24.15■■□□□ 1.46
CHRNA4-207ENST00000615287 TMF1P82094 1093 aa24.14■■□□□ 1.45
CHRNA4-207ENST00000615287 FMN1Q68DA7 1419 aa24.14■■□□□ 1.45
CHRNA4-207ENST00000615287 LAS1LQ9Y4W2 734 aaKnown RBP24.14■■□□□ 1.45
CHRNA4-207ENST00000615287 NEUROD2Q15784 382 aa24.13■■□□□ 1.45
CHRNA4-207ENST00000615287 TOP2AP11388 1531 aaKnown RBP24.13■■□□□ 1.45
CHRNA4-207ENST00000615287 SRPK2P78362 688 aaKnown RBP24.13■■□□□ 1.45
CHRNA4-207ENST00000615287 IRX6P78412 446 aaPredicted RBP24.09■■□□□ 1.45
CHRNA4-207ENST00000615287 SAFB2Q14151 953 aaKnown RBP eCLIP24.07■■□□□ 1.44
CHRNA4-207ENST00000615287 U2SURPO15042 1029 aaKnown RBP24.07■■□□□ 1.44
CHRNA4-207ENST00000615287 NPHP1O15259 732 aa24.07■■□□□ 1.44
CHRNA4-207ENST00000615287 CC2D1BQ5T0F9 858 aaKnown RBP24.07■■□□□ 1.44
CHRNA4-207ENST00000615287 VPS8Q8N3P4 1428 aa24.07■■□□□ 1.44
CHRNA4-207ENST00000615287 PKD2Q13563 968 aa24.06■■□□□ 1.44
CHRNA4-207ENST00000615287 ATAD2BQ9ULI0 1458 aa24.05■■□□□ 1.44
CHRNA4-207ENST00000615287 FTSJ3Q8IY81 847 aaKnown RBP24.05■■□□□ 1.44
CHRNA4-207ENST00000615287 PNNQ9H307 717 aaKnown RBP24.05■■□□□ 1.44
CHRNA4-207ENST00000615287 SENP3-EIF4A1A0A087X0R7 540 aa24.04■■□□□ 1.44
CHRNA4-207ENST00000615287 STK26Q9P289 416 aa24.04■■□□□ 1.44
CHRNA4-207ENST00000615287 SOX12O15370 315 aa24.03■■□□□ 1.44
CHRNA4-207ENST00000615287 JPH4Q96JJ6 628 aa24.03■■□□□ 1.44
CHRNA4-207ENST00000615287 WIZO95785 1651 aa24.02■■□□□ 1.44
CHRNA4-207ENST00000615287 ANKRD30AQ9BXX3 1397 aa24■■□□□ 1.43
CHRNA4-207ENST00000615287 SETD5Q9C0A6 1442 aa23.99■■□□□ 1.43
CHRNA4-207ENST00000615287 RAPGEF2Q9Y4G8 1499 aa23.99■■□□□ 1.43
CHRNA4-207ENST00000615287 KIF3BO15066 747 aa23.98■■□□□ 1.43
CHRNA4-207ENST00000615287 KANK4Q5T7N3 995 aaPredicted RBP23.97■■□□□ 1.43
CHRNA4-207ENST00000615287 NUP155O75694 1391 aa23.96■■□□□ 1.43
CHRNA4-207ENST00000615287 TIMELESSQ9UNS1 1208 aa23.95■■□□□ 1.42
CHRNA4-207ENST00000615287 HDGFL2Q7Z4V5 671 aaPredicted RBP23.94■■□□□ 1.42
CHRNA4-207ENST00000615287 MORC1Q86VD1 984 aa23.94■■□□□ 1.42
CHRNA4-207ENST00000615287 SPAG9O60271 1321 aaKnown RBP23.94■■□□□ 1.42
CHRNA4-207ENST00000615287 FANCD2Q9BXW9 1451 aa23.93■■□□□ 1.42
CHRNA4-207ENST00000615287 HNRNPMP52272 730 aaKnown RBP eCLIP23.93■■□□□ 1.42
CHRNA4-207ENST00000615287 RSPH4AQ5TD94 716 aa23.91■■□□□ 1.42
CHRNA4-207ENST00000615287 FOXD1Q16676 465 aa23.9■■□□□ 1.42
CHRNA4-207ENST00000615287 EID1Q9Y6B2 187 aa23.9■■□□□ 1.42
CHRNA4-207ENST00000615287 CASC1Q6TDU7 716 aa23.89■■□□□ 1.42
CHRNA4-207ENST00000615287 PAK3O75914 559 aaPredicted RBP23.89■■□□□ 1.42
CHRNA4-207ENST00000615287 FHOD3Q2V2M9 1422 aa23.89■■□□□ 1.42
CHRNA4-207ENST00000615287 OSCARQ8IYS5 282 aa23.89■■□□□ 1.41
CHRNA4-207ENST00000615287 WASHC2CQ9Y4E1 1318 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms