RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.98■■□□□ 1.273e-7■□□□□ 9.5
HMGXB3-206ENST00000613459 ARXQ96QS3 562 aa22.98■■□□□ 1.27
HMGXB3-206ENST00000613459 SALL2Q9Y467 1007 aaPredicted RBP22.98■■□□□ 1.27
HMGXB3-206ENST00000613459 TRIM44Q96DX7 344 aaPredicted RBP22.94■■□□□ 1.26
HMGXB3-206ENST00000613459 GOLGA3Q08378 1498 aa22.93■■□□□ 1.26
HMGXB3-206ENST00000613459 CDCA8Q53HL2 280 aa22.93■■□□□ 1.26
HMGXB3-206ENST00000613459 NCLP19338 710 aaKnown RBP22.92■■□□□ 1.26
HMGXB3-206ENST00000613459 GOLGA6L22H0YM25 854 aa22.91■■□□□ 1.26
HMGXB3-206ENST00000613459 KDM2AQ9Y2K7 1162 aa22.89■■□□□ 1.25
HMGXB3-206ENST00000613459 CDK11BP21127 795 aaKnown RBP22.86■■□□□ 1.25
HMGXB3-206ENST00000613459 CFAP53Q96M91 514 aa22.86■■□□□ 1.25
HMGXB3-206ENST00000613459 TNNT2P45379 298 aaPredicted RBP22.85■■□□□ 1.25
HMGXB3-206ENST00000613459 IRX6P78412 446 aaPredicted RBP22.83■■□□□ 1.24
HMGXB3-206ENST00000613459 CHMP7Q8WUX9 453 aaPredicted RBP22.82■■□□□ 1.24
HMGXB3-206ENST00000613459 PPM1GO15355 546 aaPredicted RBP22.8■■□□□ 1.24
HMGXB3-206ENST00000613459 CASC1Q6TDU7 716 aa22.77■■□□□ 1.24
HMGXB3-206ENST00000613459 CEP162Q5TB80 1403 aa22.76■■□□□ 1.23
HMGXB3-206ENST00000613459 PLEKHD1A6NEE1 506 aa22.75■■□□□ 1.23
HMGXB3-206ENST00000613459 ERICH6BQ5W0A0 696 aa22.74■■□□□ 1.23
HMGXB3-206ENST00000613459 CHMP4BQ9H444 224 aaKnown RBP22.74■■□□□ 1.23
HMGXB3-206ENST00000613459 SUPT16HQ9Y5B9 1047 aaKnown RBP22.72■■□□□ 1.23
HMGXB3-206ENST00000613459 RRP7BPQ9NSQ0 103 aa22.7■■□□□ 1.22
HMGXB3-206ENST00000613459 KNSTRNQ9Y448 316 aa22.7■■□□□ 1.22
HMGXB3-206ENST00000613459 PPP1R15AO75807 674 aaPredicted RBP22.69■■□□□ 1.22
HMGXB3-206ENST00000613459 RB1CC1Q8TDY2 1594 aa22.69■■□□□ 1.22
HMGXB3-206ENST00000613459 TNIKQ9UKE5 1360 aa22.68■■□□□ 1.22
HMGXB3-206ENST00000613459 CEP164Q9UPV0 1460 aa22.68■■□□□ 1.22
HMGXB3-206ENST00000613459 PTMAP06454 111 aaKnown RBP22.67■■□□□ 1.22
HMGXB3-206ENST00000613459 MS4A1P11836 297 aa22.66■■□□□ 1.22
HMGXB3-206ENST00000613459 KIF27Q86VH2 1401 aa22.65■■□□□ 1.22
HMGXB3-206ENST00000613459 ZRSR1Q15695 479 aaKnown RBP22.65■■□□□ 1.22
HMGXB3-206ENST00000613459 WRNQ14191 1432 aaPredicted RBP eCLIP22.62■■□□□ 1.21
HMGXB3-206ENST00000613459 PLPPR3Q6T4P5 718 aa22.61■■□□□ 1.21
HMGXB3-206ENST00000613459 PPP4R2Q9NY27 417 aa22.61■■□□□ 1.21
HMGXB3-206ENST00000613459 NUDCQ9Y266 331 aa22.61■■□□□ 1.21
HMGXB3-206ENST00000613459 FTSJ3Q8IY81 847 aaKnown RBP22.6■■□□□ 1.21
HMGXB3-206ENST00000613459 HIRIP3Q9BW71 556 aaPredicted RBP22.59■■□□□ 1.21
HMGXB3-206ENST00000613459 DNTTIP2Q5QJE6 756 aaKnown RBP22.58■■□□□ 1.2
HMGXB3-206ENST00000613459 CARD11Q9BXL7 1154 aa22.58■■□□□ 1.2
HMGXB3-206ENST00000613459 CFDP1Q9UEE9 299 aaPredicted RBP22.58■■□□□ 1.2
HMGXB3-206ENST00000613459 NOP58Q9Y2X3 529 aaKnown RBP22.57■■□□□ 1.2
HMGXB3-206ENST00000613459 MAPK8IP3Q9UPT6 1336 aa22.57■■□□□ 1.2
HMGXB3-206ENST00000613459 NAP1L5Q96NT1 182 aaPredicted RBP22.57■■□□□ 1.2
HMGXB3-206ENST00000613459 TIMELESSQ9UNS1 1208 aa22.57■■□□□ 1.2
HMGXB3-206ENST00000613459 PNNQ9H307 717 aaKnown RBP22.56■■□□□ 1.2
HMGXB3-206ENST00000613459 C14orf37Q86TY3 774 aa22.5■■□□□ 1.19
HMGXB3-206ENST00000613459 FHAD1B1AJZ9 1412 aa22.49■■□□□ 1.19
HMGXB3-206ENST00000613459 CFAP44Q96MT7 982 aa22.49■■□□□ 1.19
HMGXB3-206ENST00000613459 RTN4Q9NQC3 1192 aaKnown RBP22.49■■□□□ 1.19
HMGXB3-206ENST00000613459 BAZ1BQ9UIG0 1483 aaKnown RBP22.48■■□□□ 1.19
HMGXB3-206ENST00000613459 RGL3Q3MIN7 710 aa22.48■■□□□ 1.19
HMGXB3-206ENST00000613459 GOLGA6L6A8MZA4 724 aa22.47■■□□□ 1.19
HMGXB3-206ENST00000613459 NACADO15069 1562 aa22.46■■□□□ 1.19
HMGXB3-206ENST00000613459 KCNH8Q96L42 1107 aa22.46■■□□□ 1.19
HMGXB3-206ENST00000613459 DEKP35659 375 aaKnown RBP22.44■■□□□ 1.18
HMGXB3-206ENST00000613459 LAS1LQ9Y4W2 734 aaKnown RBP22.44■■□□□ 1.18
HMGXB3-206ENST00000613459 ZBTB7CA1YPR0 619 aa22.44■■□□□ 1.18
HMGXB3-206ENST00000613459 NRDCO43847 1150 aa22.41■■□□□ 1.18
HMGXB3-206ENST00000613459 RBM19Q9Y4C8 960 aaKnown RBP22.41■■□□□ 1.18
HMGXB3-206ENST00000613459 L1TD1Q5T7N2 865 aaKnown RBP22.39■■□□□ 1.18
HMGXB3-206ENST00000613459 TSHZ2Q9NRE2 1034 aa22.39■■□□□ 1.18
HMGXB3-206ENST00000613459 CCER2I3L3R5 266 aa22.39■■□□□ 1.17
HMGXB3-206ENST00000613459 A0A0G2JS52 829 aa22.39■■□□□ 1.17
HMGXB3-206ENST00000613459 HAP1P54257 671 aaPredicted RBP22.38■■□□□ 1.17
HMGXB3-206ENST00000613459 TMF1P82094 1093 aa22.37■■□□□ 1.17
HMGXB3-206ENST00000613459 HSP90AB1P08238 724 aaKnown RBP22.36■■□□□ 1.17
HMGXB3-206ENST00000613459 POGKQ9P215 609 aa22.36■■□□□ 1.17
HMGXB3-206ENST00000613459 CCNB3Q8WWL7 1395 aa22.35■■□□□ 1.17
HMGXB3-206ENST00000613459 KANK1Q14678 1352 aa22.35■■□□□ 1.17
HMGXB3-206ENST00000613459 CHAF1AQ13111 956 aaPredicted RBP22.31■■□□□ 1.16
HMGXB3-206ENST00000613459 RGS3P49796 1198 aa22.3■■□□□ 1.16
HMGXB3-206ENST00000613459 HSCBQ8IWL3 235 aa22.29■■□□□ 1.16
HMGXB3-206ENST00000613459 PTMSP20962 102 aa22.29■■□□□ 1.16
HMGXB3-206ENST00000613459 HDGFP51858 240 aaKnown RBP22.29■■□□□ 1.16
HMGXB3-206ENST00000613459 MCCP23508 829 aa22.28■■□□□ 1.16
HMGXB3-206ENST00000613459 BAZ1AQ9NRL2 1556 aaPredicted RBP22.28■■□□□ 1.16
HMGXB3-206ENST00000613459 FRAT1Q92837 279 aaPredicted RBP22.28■■□□□ 1.16
HMGXB3-206ENST00000613459 MSNP26038 577 aaKnown RBP22.26■■□□□ 1.15
HMGXB3-206ENST00000613459 NEUROD2Q15784 382 aa22.26■■□□□ 1.15
HMGXB3-206ENST00000613459 OS9Q13438 667 aaPredicted RBP22.25■■□□□ 1.15
HMGXB3-206ENST00000613459 PLCB2Q00722 1185 aa22.25■■□□□ 1.15
HMGXB3-206ENST00000613459 ARID4BQ4LE39 1312 aaPredicted RBP22.24■■□□□ 1.15
HMGXB3-206ENST00000613459 FGD1P98174 961 aa22.24■■□□□ 1.15
HMGXB3-206ENST00000613459 TPRNQ4KMQ1 711 aa22.23■■□□□ 1.15
HMGXB3-206ENST00000613459 KCNJ4P48050 445 aa22.21■■□□□ 1.15
HMGXB3-206ENST00000613459 SIN3AQ96ST3 1273 aa22.21■■□□□ 1.15
HMGXB3-206ENST00000613459 GOLGA6L4A6NEF3 574 aa22.2■■□□□ 1.14
HMGXB3-206ENST00000613459 SETD5Q9C0A6 1442 aa22.19■■□□□ 1.14
HMGXB3-206ENST00000613459 CC2D1BQ5T0F9 858 aaKnown RBP22.19■■□□□ 1.14
HMGXB3-206ENST00000613459 U2SURPO15042 1029 aaKnown RBP22.19■■□□□ 1.14
HMGXB3-206ENST00000613459 B4GALNT3Q6L9W6 998 aa22.18■■□□□ 1.14
HMGXB3-206ENST00000613459 IPO8O15397 1037 aaKnown RBP22.16■■□□□ 1.14
HMGXB3-206ENST00000613459 KTN1Q86UP2 1357 aaKnown RBP22.16■■□□□ 1.14
HMGXB3-206ENST00000613459 CALD1Q05682 793 aaKnown RBP22.16■■□□□ 1.14
HMGXB3-206ENST00000613459 ARHGAP35Q9NRY4 1499 aa22.16■■□□□ 1.14
HMGXB3-206ENST00000613459 CARMIL1Q5VZK9 1371 aa22.14■■□□□ 1.14
HMGXB3-206ENST00000613459 CHMP4AQ9BY43 222 aa22.14■■□□□ 1.13
HMGXB3-206ENST00000613459 DCAF11Q8TEB1 546 aa22.13■■□□□ 1.13
HMGXB3-206ENST00000613459 SENP3Q9H4L4 574 aaPredicted RBP22.13■■□□□ 1.13
HMGXB3-206ENST00000613459 MORC1Q86VD1 984 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms