RNA–Protein interactions for RNA: ENST00000613060.4

SLC6A6-204, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best) BASIC

Gene SLC6A6, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-204ENST00000613060 PPM1GO15355 546 aaPredicted RBP16.07■□□□□ 0.16
SLC6A6-204ENST00000613060 FBXO3Q9UK99 471 aa16.07■□□□□ 0.16
SLC6A6-204ENST00000613060 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.07■□□□□ 0.16
SLC6A6-204ENST00000613060 TMX4Q9H1E5 349 aaPredicted RBP16.05■□□□□ 0.16
SLC6A6-204ENST00000613060 FKBP8Q14318 412 aa16.05■□□□□ 0.16
SLC6A6-204ENST00000613060 MYH16Q9H6N6 1097 aa16.04■□□□□ 0.16
SLC6A6-204ENST00000613060 PDE4CQ08493 712 aa16.02■□□□□ 0.16
SLC6A6-204ENST00000613060 KCNH8Q96L42 1107 aa16.02■□□□□ 0.16
SLC6A6-204ENST00000613060 NAP1L2Q9ULW6 460 aaPredicted RBP16.02■□□□□ 0.16
SLC6A6-204ENST00000613060 G3V3G9 751 aa15.99■□□□□ 0.15
SLC6A6-204ENST00000613060 DCAF8Q5TAQ9 597 aa15.99■□□□□ 0.15
SLC6A6-204ENST00000613060 NBR1Q14596 966 aa15.99■□□□□ 0.15
SLC6A6-204ENST00000613060 ZRSR1Q15695 479 aaKnown RBP15.99■□□□□ 0.15
SLC6A6-204ENST00000613060 MLECQ14165 292 aa15.98■□□□□ 0.15
SLC6A6-204ENST00000613060 KDM2AQ9Y2K7 1162 aa15.97■□□□□ 0.15
SLC6A6-204ENST00000613060 CNKSR2Q8WXI2 1034 aa15.96■□□□□ 0.15
SLC6A6-204ENST00000613060 ZNF330Q9Y3S2 320 aaPredicted RBP15.96■□□□□ 0.15
SLC6A6-204ENST00000613060 MSH5O43196 834 aa15.96■□□□□ 0.15
SLC6A6-204ENST00000613060 TMC1Q8TDI8 760 aa15.95■□□□□ 0.14
SLC6A6-204ENST00000613060 NCLP19338 710 aaKnown RBP15.94■□□□□ 0.14
SLC6A6-204ENST00000613060 WDR43Q15061 677 aaKnown RBP eCLIP15.94■□□□□ 0.14
SLC6A6-204ENST00000613060 SOX12O15370 315 aa15.94■□□□□ 0.14
SLC6A6-204ENST00000613060 GTF3C3Q9Y5Q9 886 aa15.94■□□□□ 0.14
SLC6A6-204ENST00000613060 LAS1LQ9Y4W2 734 aaKnown RBP15.92■□□□□ 0.14
SLC6A6-204ENST00000613060 ABCC9O60706 1549 aa15.91■□□□□ 0.14
SLC6A6-204ENST00000613060 MEX3CQ5U5Q3 659 aaKnown RBP15.9■□□□□ 0.14
SLC6A6-204ENST00000613060 TONSLQ96HA7 1378 aa15.87■□□□□ 0.13
SLC6A6-204ENST00000613060 OS9Q13438 667 aaPredicted RBP15.85■□□□□ 0.13
SLC6A6-204ENST00000613060 WWC1Q8IX03 1113 aa15.83■□□□□ 0.13
SLC6A6-204ENST00000613060 TRIM44Q96DX7 344 aaPredicted RBP15.82■□□□□ 0.12
SLC6A6-204ENST00000613060 FGD1P98174 961 aa15.82■□□□□ 0.12
SLC6A6-204ENST00000613060 FAM9BQ8IZU0 186 aa15.81■□□□□ 0.12
SLC6A6-204ENST00000613060 CHIC2Q9UKJ5 165 aa15.81■□□□□ 0.12
SLC6A6-204ENST00000613060 CWC22Q9HCG8 908 aaKnown RBP15.8■□□□□ 0.12
SLC6A6-204ENST00000613060 HNRNPUQ00839 825 aaKnown RBP eCLIP15.79■□□□□ 0.12
SLC6A6-204ENST00000613060 CHMP7Q8WUX9 453 aaPredicted RBP15.79■□□□□ 0.12
SLC6A6-204ENST00000613060 CCDC136Q96JN2 1154 aa15.79■□□□□ 0.12
SLC6A6-204ENST00000613060 GOLGA6L22H0YM25 854 aa15.78■□□□□ 0.12
SLC6A6-204ENST00000613060 TSPY4P0CV99 314 aa15.77■□□□□ 0.12
SLC6A6-204ENST00000613060 TSPY10P0CW01 314 aa15.77■□□□□ 0.12
SLC6A6-204ENST00000613060 CSB-PGBD3P0DP91 1061 aa15.77■□□□□ 0.12
SLC6A6-204ENST00000613060 VPS53Q5VIR6 699 aa15.74■□□□□ 0.11
SLC6A6-204ENST00000613060 EIF4G2P78344 907 aaKnown RBP eCLIP15.73■□□□□ 0.111e-7■■■■■ 35.2
SLC6A6-204ENST00000613060 CASC1Q6TDU7 716 aa15.73■□□□□ 0.11
SLC6A6-204ENST00000613060 ANP32EQ9BTT0 268 aa15.73■□□□□ 0.11
SLC6A6-204ENST00000613060 PAK3O75914 559 aaPredicted RBP15.73■□□□□ 0.11
SLC6A6-204ENST00000613060 BECN1Q14457 450 aa15.72■□□□□ 0.11
SLC6A6-204ENST00000613060 PLCB2Q00722 1185 aa15.71■□□□□ 0.11
SLC6A6-204ENST00000613060 TNNT2P45379 298 aaPredicted RBP15.7■□□□□ 0.1
SLC6A6-204ENST00000613060 POGKQ9P215 609 aa15.7■□□□□ 0.1
SLC6A6-204ENST00000613060 KCNJ4P48050 445 aa15.69■□□□□ 0.1
SLC6A6-204ENST00000613060 PTMAP06454 111 aaKnown RBP15.69■□□□□ 0.1
SLC6A6-204ENST00000613060 PPP1R1BQ9UD71 204 aaPredicted RBP15.67■□□□□ 0.1
SLC6A6-204ENST00000613060 CFAP53Q96M91 514 aa15.67■□□□□ 0.1
SLC6A6-204ENST00000613060 SENP3-EIF4A1A0A087X0R7 540 aa15.66■□□□□ 0.1
SLC6A6-204ENST00000613060 GOLGA6L6A8MZA4 724 aa15.65■□□□□ 0.1
SLC6A6-204ENST00000613060 CSRNP3Q8WYN3 585 aa15.64■□□□□ 0.09
SLC6A6-204ENST00000613060 ERICH6BQ5W0A0 696 aa15.63■□□□□ 0.09
SLC6A6-204ENST00000613060 NOC3LQ8WTT2 800 aaKnown RBP15.63■□□□□ 0.09
SLC6A6-204ENST00000613060 RGL3Q3MIN7 710 aa15.62■□□□□ 0.09
SLC6A6-204ENST00000613060 GNL2Q13823 731 aaKnown RBP15.62■□□□□ 0.09
SLC6A6-204ENST00000613060 RAD21O60216 631 aa15.61■□□□□ 0.09
SLC6A6-204ENST00000613060 MRS2Q9HD23 443 aa15.61■□□□□ 0.09
SLC6A6-204ENST00000613060 NEUROD2Q15784 382 aa15.61■□□□□ 0.09
SLC6A6-204ENST00000613060 DDRGK1Q96HY6 314 aa15.61■□□□□ 0.09
SLC6A6-204ENST00000613060 DNTTIP2Q5QJE6 756 aaKnown RBP15.6■□□□□ 0.09
SLC6A6-204ENST00000613060 NRDCO43847 1150 aa15.6■□□□□ 0.09
SLC6A6-204ENST00000613060 FBXW7Q969H0 707 aa15.6■□□□□ 0.09
SLC6A6-204ENST00000613060 WDR70Q9NW82 654 aa15.59■□□□□ 0.09
SLC6A6-204ENST00000613060 DDX10Q13206 875 aaKnown RBP15.58■□□□□ 0.09
SLC6A6-204ENST00000613060 GTF2E1P29083 439 aaPredicted RBP15.58■□□□□ 0.08
SLC6A6-204ENST00000613060 CTDP1Q9Y5B0 961 aaPredicted RBP15.58■□□□□ 0.08
SLC6A6-204ENST00000613060 PNNQ9H307 717 aaKnown RBP15.56■□□□□ 0.08
SLC6A6-204ENST00000613060 CHMP3Q9Y3E7 222 aa15.56■□□□□ 0.08
SLC6A6-204ENST00000613060 CFAP44Q96MT7 982 aa15.55■□□□□ 0.08
SLC6A6-204ENST00000613060 KIAA2012Q0VF49 1180 aa15.55■□□□□ 0.08
SLC6A6-204ENST00000613060 SAMD1Q6SPF0 538 aaPredicted RBP15.55■□□□□ 0.08
SLC6A6-204ENST00000613060 FRAT2O75474 233 aaPredicted RBP15.55■□□□□ 0.08
SLC6A6-204ENST00000613060 ACIN1Q9UKV3 1341 aaKnown RBP15.54■□□□□ 0.08
SLC6A6-204ENST00000613060 CDCA8Q53HL2 280 aa15.54■□□□□ 0.08
SLC6A6-204ENST00000613060 L1TD1Q5T7N2 865 aaKnown RBP15.53■□□□□ 0.08
SLC6A6-204ENST00000613060 VSIG10Q8N0Z9 540 aa15.53■□□□□ 0.08
SLC6A6-204ENST00000613060 FTSJ3Q8IY81 847 aaKnown RBP15.53■□□□□ 0.08
SLC6A6-204ENST00000613060 MAPK8IP3Q9UPT6 1336 aa15.52■□□□□ 0.08
SLC6A6-204ENST00000613060 SAFB2Q14151 953 aaKnown RBP eCLIP15.52■□□□□ 0.07
SLC6A6-204ENST00000613060 CHMP4BQ9H444 224 aaKnown RBP15.51■□□□□ 0.07
SLC6A6-204ENST00000613060 TAF7LQ5H9L4 462 aa15.5■□□□□ 0.07
SLC6A6-204ENST00000613060 NUDCQ9Y266 331 aa15.5■□□□□ 0.07
SLC6A6-204ENST00000613060 TCEAL9Q9UHQ7 104 aa15.49■□□□□ 0.07
SLC6A6-204ENST00000613060 U2SURPO15042 1029 aaKnown RBP15.48■□□□□ 0.07
SLC6A6-204ENST00000613060 CREBRFQ8IUR6 639 aa15.48■□□□□ 0.07
SLC6A6-204ENST00000613060 TRIM34Q9BYJ4 488 aa15.47■□□□□ 0.07
SLC6A6-204ENST00000613060 MARCH6O60337 910 aa15.47■□□□□ 0.07
SLC6A6-204ENST00000613060 A0A0U1RQG5 324 aaPredicted RBP15.47■□□□□ 0.07
SLC6A6-204ENST00000613060 KNSTRNQ9Y448 316 aa15.45■□□□□ 0.06
SLC6A6-204ENST00000613060 GOLGA6L4A6NEF3 574 aa15.44■□□□□ 0.06
SLC6A6-204ENST00000613060 PPM1FP49593 454 aaPredicted RBP15.44■□□□□ 0.06
SLC6A6-204ENST00000613060 MTUS2Q5JR59 1369 aa15.44■□□□□ 0.06
SLC6A6-204ENST00000613060 GORABQ5T7V8 394 aa15.44■□□□□ 0.06
SLC6A6-204ENST00000613060 EVA1CP58658 441 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms