RNA–Protein interactions for RNA: ENST00000610966.4

SVOP-205, Transcript of SV2 related protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVOP, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-205ENST00000610966 PLEKHD1A6NEE1 506 aa12.73□□□□□ -0.37
SVOP-205ENST00000610966 KCNH8Q96L42 1107 aa12.73□□□□□ -0.37
SVOP-205ENST00000610966 MIER1Q8N108 512 aa12.73□□□□□ -0.37
SVOP-205ENST00000610966 BAZ1BQ9UIG0 1483 aaKnown RBP12.71□□□□□ -0.37
SVOP-205ENST00000610966 MYO15BQ96JP2 1530 aa12.71□□□□□ -0.37
SVOP-205ENST00000610966 NACADO15069 1562 aa12.7□□□□□ -0.38
SVOP-205ENST00000610966 ANP32BQ92688 251 aaKnown RBP12.68□□□□□ -0.38
SVOP-205ENST00000610966 KIF27Q86VH2 1401 aa12.68□□□□□ -0.38
SVOP-205ENST00000610966 RGL3Q3MIN7 710 aa12.66□□□□□ -0.38
SVOP-205ENST00000610966 CFDP1Q9UEE9 299 aaPredicted RBP12.65□□□□□ -0.38
SVOP-205ENST00000610966 TNIKQ9UKE5 1360 aa12.65□□□□□ -0.38
SVOP-205ENST00000610966 SENP3Q9H4L4 574 aaPredicted RBP12.65□□□□□ -0.39
SVOP-205ENST00000610966 IRX6P78412 446 aaPredicted RBP12.64□□□□□ -0.39
SVOP-205ENST00000610966 CEP164Q9UPV0 1460 aa12.64□□□□□ -0.39
SVOP-205ENST00000610966 PPP1R15AO75807 674 aaPredicted RBP12.63□□□□□ -0.39
SVOP-205ENST00000610966 SCAF1Q9H7N4 1312 aaKnown RBP12.62□□□□□ -0.39
SVOP-205ENST00000610966 MYH16Q9H6N6 1097 aa12.59□□□□□ -0.39
SVOP-205ENST00000610966 BAZ1AQ9NRL2 1556 aaPredicted RBP12.57□□□□□ -0.4
SVOP-205ENST00000610966 C14orf37Q86TY3 774 aa12.57□□□□□ -0.4
SVOP-205ENST00000610966 CDCA8Q53HL2 280 aa12.57□□□□□ -0.4
SVOP-205ENST00000610966 NBR1Q14596 966 aa12.56□□□□□ -0.4
SVOP-205ENST00000610966 ZBTB7CA1YPR0 619 aa12.56□□□□□ -0.4
SVOP-205ENST00000610966 CARD11Q9BXL7 1154 aa12.56□□□□□ -0.4
SVOP-205ENST00000610966 PLEKHG5O94827 1062 aa12.55□□□□□ -0.4
SVOP-205ENST00000610966 KNSTRNQ9Y448 316 aa12.55□□□□□ -0.4
SVOP-205ENST00000610966 CFAP53Q96M91 514 aa12.54□□□□□ -0.4
SVOP-205ENST00000610966 A0A0G2JS52 829 aa12.53□□□□□ -0.4
SVOP-205ENST00000610966 SIN3AQ96ST3 1273 aa12.52□□□□□ -0.41
SVOP-205ENST00000610966 ARID4BQ4LE39 1312 aaPredicted RBP12.52□□□□□ -0.41
SVOP-205ENST00000610966 ERCC6Q03468 1493 aa12.52□□□□□ -0.41
SVOP-205ENST00000610966 CECR2Q9BXF3 1484 aa12.51□□□□□ -0.41
SVOP-205ENST00000610966 SENP3-EIF4A1A0A087X0R7 540 aa12.51□□□□□ -0.41
SVOP-205ENST00000610966 EIF5BO60841 1220 aaKnown RBP12.51□□□□□ -0.41
SVOP-205ENST00000610966 ARXQ96QS3 562 aa12.49□□□□□ -0.41
SVOP-205ENST00000610966 FHAD1B1AJZ9 1412 aa12.49□□□□□ -0.41
SVOP-205ENST00000610966 PPM1GO15355 546 aaPredicted RBP12.49□□□□□ -0.41
SVOP-205ENST00000610966 CARMIL1Q5VZK9 1371 aa12.48□□□□□ -0.41
SVOP-205ENST00000610966 CCNB3Q8WWL7 1395 aa12.48□□□□□ -0.41
SVOP-205ENST00000610966 SUPT16HQ9Y5B9 1047 aaKnown RBP12.46□□□□□ -0.41
SVOP-205ENST00000610966 CUX2O14529 1486 aa12.46□□□□□ -0.42
SVOP-205ENST00000610966 SOGA1O94964 1423 aa12.45□□□□□ -0.42
SVOP-205ENST00000610966 BECN1Q14457 450 aa12.45□□□□□ -0.42
SVOP-205ENST00000610966 DDRGK1Q96HY6 314 aa12.44□□□□□ -0.42
SVOP-205ENST00000610966 NEUROD2Q15784 382 aa12.44□□□□□ -0.42
SVOP-205ENST00000610966 POGKQ9P215 609 aa12.44□□□□□ -0.42
SVOP-205ENST00000610966 EIF4G1Q04637 1599 aaKnown RBP12.43□□□□□ -0.42
SVOP-205ENST00000610966 MAPK8IP3Q9UPT6 1336 aa12.42□□□□□ -0.42
SVOP-205ENST00000610966 NUDCQ9Y266 331 aa12.42□□□□□ -0.42
SVOP-205ENST00000610966 HAP1P54257 671 aaPredicted RBP12.42□□□□□ -0.42
SVOP-205ENST00000610966 FTSJ3Q8IY81 847 aaKnown RBP12.42□□□□□ -0.42
SVOP-205ENST00000610966 DCAF11Q8TEB1 546 aa12.4□□□□□ -0.42
SVOP-205ENST00000610966 LAS1LQ9Y4W2 734 aaKnown RBP12.4□□□□□ -0.42
SVOP-205ENST00000610966 CC2D1BQ5T0F9 858 aaKnown RBP12.4□□□□□ -0.42
SVOP-205ENST00000610966 TNNT2P45379 298 aaPredicted RBP12.39□□□□□ -0.43
SVOP-205ENST00000610966 TMF1P82094 1093 aa12.37□□□□□ -0.43
SVOP-205ENST00000610966 TIMELESSQ9UNS1 1208 aa12.37□□□□□ -0.43
SVOP-205ENST00000610966 NCLP19338 710 aaKnown RBP12.37□□□□□ -0.43
SVOP-205ENST00000610966 KANK1Q14678 1352 aa12.36□□□□□ -0.43
SVOP-205ENST00000610966 LMOD2Q6P5Q4 547 aa12.36□□□□□ -0.43
SVOP-205ENST00000610966 CCDC88BA6NC98 1476 aa12.36□□□□□ -0.43
SVOP-205ENST00000610966 GOLGA6L22H0YM25 854 aa12.35□□□□□ -0.43
SVOP-205ENST00000610966 FRAT1Q92837 279 aaPredicted RBP12.35□□□□□ -0.43
SVOP-205ENST00000610966 PPP4R2Q9NY27 417 aa12.35□□□□□ -0.43
SVOP-205ENST00000610966 CASC1Q6TDU7 716 aa12.35□□□□□ -0.43
SVOP-205ENST00000610966 VPS8Q8N3P4 1428 aa12.35□□□□□ -0.43
SVOP-205ENST00000610966 U2SURPO15042 1029 aaKnown RBP12.35□□□□□ -0.43
SVOP-205ENST00000610966 MROH2BQ7Z745 1585 aa12.34□□□□□ -0.43
SVOP-205ENST00000610966 SETD5Q9C0A6 1442 aa12.34□□□□□ -0.43
SVOP-205ENST00000610966 ANP32EQ9BTT0 268 aa12.34□□□□□ -0.43
SVOP-205ENST00000610966 ARHGAP35Q9NRY4 1499 aa12.33□□□□□ -0.43
SVOP-205ENST00000610966 ABCC8Q09428 1581 aa12.33□□□□□ -0.44
SVOP-205ENST00000610966 RGS3P49796 1198 aa12.31□□□□□ -0.44
SVOP-205ENST00000610966 KANK4Q5T7N3 995 aaPredicted RBP12.31□□□□□ -0.44
SVOP-205ENST00000610966 PNNQ9H307 717 aaKnown RBP12.31□□□□□ -0.44
SVOP-205ENST00000610966 CHMP4BQ9H444 224 aaKnown RBP12.3□□□□□ -0.44
SVOP-205ENST00000610966 PKD2Q13563 968 aa12.3□□□□□ -0.44
SVOP-205ENST00000610966 MLECQ14165 292 aa12.3□□□□□ -0.44
SVOP-205ENST00000610966 MS4A1P11836 297 aa12.3□□□□□ -0.44
SVOP-205ENST00000610966 SRPK2P78362 688 aaKnown RBP12.29□□□□□ -0.44
SVOP-205ENST00000610966 TRIM44Q96DX7 344 aaPredicted RBP12.29□□□□□ -0.44
SVOP-205ENST00000610966 HDGFP51858 240 aaKnown RBP12.29□□□□□ -0.44
SVOP-205ENST00000610966 SMARCA2P51531 1590 aa12.29□□□□□ -0.44
SVOP-205ENST00000610966 HSPA5P11021 654 aaKnown RBP12.29□□□□□ -0.44
SVOP-205ENST00000610966 CARMIL2Q6F5E8 1435 aa12.29□□□□□ -0.44
SVOP-205ENST00000610966 GLIPR1L2Q4G1C9 344 aa12.28□□□□□ -0.44
SVOP-205ENST00000610966 GGT6Q6P531 493 aa12.28□□□□□ -0.44
SVOP-205ENST00000610966 PDS5BQ9NTI5 1447 aa12.27□□□□□ -0.44
SVOP-205ENST00000610966 CDK11BP21127 795 aaKnown RBP12.27□□□□□ -0.45
SVOP-205ENST00000610966 FOXD1Q16676 465 aa12.27□□□□□ -0.45
SVOP-205ENST00000610966 MORC1Q86VD1 984 aa12.27□□□□□ -0.45
SVOP-205ENST00000610966 CCER2I3L3R5 266 aa12.26□□□□□ -0.45
SVOP-205ENST00000610966 TDRD9Q8NDG6 1382 aaKnown RBP12.26□□□□□ -0.45
SVOP-205ENST00000610966 SAFB2Q14151 953 aaKnown RBP eCLIP12.26□□□□□ -0.45
SVOP-205ENST00000610966 B4GALNT3Q6L9W6 998 aa12.26□□□□□ -0.45
SVOP-205ENST00000610966 FMN1Q68DA7 1419 aa12.25□□□□□ -0.45
SVOP-205ENST00000610966 SOX12O15370 315 aa12.24□□□□□ -0.45
SVOP-205ENST00000610966 ZRSR1Q15695 479 aaKnown RBP12.24□□□□□ -0.45
SVOP-205ENST00000610966 TRHP20396 242 aaPredicted RBP12.23□□□□□ -0.45
SVOP-205ENST00000610966 OS9Q13438 667 aaPredicted RBP12.23□□□□□ -0.45
SVOP-205ENST00000610966 MPHOSPH9Q99550 1183 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms