RNA–Protein interactions for RNA: ENST00000610583.1

PCDHGA6-202, Transcript of protocadherin gamma subfamily A, 6, humanhuman

APPRIS P1 BASIC

Gene PCDHGA6, Length 5,650 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-202ENST00000610583 MRS2Q9HD23 443 aa18.98■□□□□ 0.63
PCDHGA6-202ENST00000610583 CEP164Q9UPV0 1460 aa18.97■□□□□ 0.63
PCDHGA6-202ENST00000610583 CFDP1Q9UEE9 299 aaPredicted RBP18.96■□□□□ 0.63
PCDHGA6-202ENST00000610583 TNIKQ9UKE5 1360 aa18.95■□□□□ 0.62
PCDHGA6-202ENST00000610583 ERCC6Q03468 1493 aa18.95■□□□□ 0.62
PCDHGA6-202ENST00000610583 MYO15BQ96JP2 1530 aa18.94■□□□□ 0.62
PCDHGA6-202ENST00000610583 HIRIP3Q9BW71 556 aaPredicted RBP18.94■□□□□ 0.62
PCDHGA6-202ENST00000610583 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.94■□□□□ 0.62
PCDHGA6-202ENST00000610583 PPP1R15AO75807 674 aaPredicted RBP18.93■□□□□ 0.62
PCDHGA6-202ENST00000610583 UPF2Q9HAU5 1272 aaKnown RBP18.9■□□□□ 0.62
PCDHGA6-202ENST00000610583 RGL3Q3MIN7 710 aa18.89■□□□□ 0.61
PCDHGA6-202ENST00000610583 CECR2Q9BXF3 1484 aa18.88■□□□□ 0.61
PCDHGA6-202ENST00000610583 SENP3Q9H4L4 574 aaPredicted RBP18.87■□□□□ 0.61
PCDHGA6-202ENST00000610583 HSP90AA1P07900 732 aaKnown RBP18.87■□□□□ 0.61
PCDHGA6-202ENST00000610583 SCAF1Q9H7N4 1312 aaKnown RBP18.86■□□□□ 0.61
PCDHGA6-202ENST00000610583 CCDC136Q96JN2 1154 aa18.86■□□□□ 0.61
PCDHGA6-202ENST00000610583 MIER1Q8N108 512 aa18.83■□□□□ 0.6
PCDHGA6-202ENST00000610583 ARID4BQ4LE39 1312 aaPredicted RBP18.82■□□□□ 0.6
PCDHGA6-202ENST00000610583 C14orf37Q86TY3 774 aa18.78■□□□□ 0.6
PCDHGA6-202ENST00000610583 CDCA8Q53HL2 280 aa18.77■□□□□ 0.6
PCDHGA6-202ENST00000610583 CARMIL1Q5VZK9 1371 aa18.77■□□□□ 0.6
PCDHGA6-202ENST00000610583 ZBTB7CA1YPR0 619 aa18.76■□□□□ 0.59
PCDHGA6-202ENST00000610583 CUX2O14529 1486 aa18.75■□□□□ 0.59
PCDHGA6-202ENST00000610583 FHAD1B1AJZ9 1412 aa18.74■□□□□ 0.59
PCDHGA6-202ENST00000610583 CARD11Q9BXL7 1154 aa18.74■□□□□ 0.59
PCDHGA6-202ENST00000610583 CCNB3Q8WWL7 1395 aa18.72■□□□□ 0.59
PCDHGA6-202ENST00000610583 PLEKHG5O94827 1062 aa18.72■□□□□ 0.59
PCDHGA6-202ENST00000610583 KNSTRNQ9Y448 316 aa18.71■□□□□ 0.59
PCDHGA6-202ENST00000610583 MYH16Q9H6N6 1097 aa18.7■□□□□ 0.58
PCDHGA6-202ENST00000610583 EIF4G1Q04637 1599 aaKnown RBP18.7■□□□□ 0.58
PCDHGA6-202ENST00000610583 CFAP53Q96M91 514 aa18.7■□□□□ 0.58
PCDHGA6-202ENST00000610583 ANP32BQ92688 251 aaKnown RBP18.7■□□□□ 0.58
PCDHGA6-202ENST00000610583 A0A0G2JS52 829 aa18.69■□□□□ 0.58
PCDHGA6-202ENST00000610583 SOGA1O94964 1423 aa18.67■□□□□ 0.58
PCDHGA6-202ENST00000610583 IRX6P78412 446 aaPredicted RBP18.67■□□□□ 0.58
PCDHGA6-202ENST00000610583 SIN3AQ96ST3 1273 aa18.65■□□□□ 0.58
PCDHGA6-202ENST00000610583 CCDC88BA6NC98 1476 aa18.63■□□□□ 0.57
PCDHGA6-202ENST00000610583 MROH2BQ7Z745 1585 aa18.63■□□□□ 0.57
PCDHGA6-202ENST00000610583 SMARCA2P51531 1590 aa18.61■□□□□ 0.57
PCDHGA6-202ENST00000610583 POGKQ9P215 609 aa18.61■□□□□ 0.57
PCDHGA6-202ENST00000610583 PPM1GO15355 546 aaPredicted RBP18.6■□□□□ 0.57
PCDHGA6-202ENST00000610583 HAP1P54257 671 aaPredicted RBP18.6■□□□□ 0.57
PCDHGA6-202ENST00000610583 PDS5BQ9NTI5 1447 aa18.59■□□□□ 0.57
PCDHGA6-202ENST00000610583 KANK1Q14678 1352 aa18.56■□□□□ 0.56
PCDHGA6-202ENST00000610583 NUDCQ9Y266 331 aa18.53■□□□□ 0.56
PCDHGA6-202ENST00000610583 SENP3-EIF4A1A0A087X0R7 540 aa18.52■□□□□ 0.56
PCDHGA6-202ENST00000610583 CARMIL2Q6F5E8 1435 aa18.52■□□□□ 0.55
PCDHGA6-202ENST00000610583 DCAF11Q8TEB1 546 aa18.52■□□□□ 0.55
PCDHGA6-202ENST00000610583 MAPK8IP3Q9UPT6 1336 aa18.51■□□□□ 0.55
PCDHGA6-202ENST00000610583 ABCC8Q09428 1581 aa18.51■□□□□ 0.55
PCDHGA6-202ENST00000610583 VPS8Q8N3P4 1428 aa18.5■□□□□ 0.55
PCDHGA6-202ENST00000610583 NEUROD2Q15784 382 aa18.49■□□□□ 0.55
PCDHGA6-202ENST00000610583 TDRD9Q8NDG6 1382 aaKnown RBP18.49■□□□□ 0.55
PCDHGA6-202ENST00000610583 ARHGAP35Q9NRY4 1499 aa18.48■□□□□ 0.55
PCDHGA6-202ENST00000610583 LMOD2Q6P5Q4 547 aa18.48■□□□□ 0.55
PCDHGA6-202ENST00000610583 TRHP20396 242 aaPredicted RBP18.47■□□□□ 0.55
PCDHGA6-202ENST00000610583 TMF1P82094 1093 aa18.47■□□□□ 0.55
PCDHGA6-202ENST00000610583 TIMELESSQ9UNS1 1208 aa18.47■□□□□ 0.55
PCDHGA6-202ENST00000610583 MLECQ14165 292 aa18.46■□□□□ 0.55
PCDHGA6-202ENST00000610583 HDGFP51858 240 aaKnown RBP18.46■□□□□ 0.55
PCDHGA6-202ENST00000610583 CC2D1BQ5T0F9 858 aaKnown RBP18.45■□□□□ 0.54
PCDHGA6-202ENST00000610583 TNNT2P45379 298 aaPredicted RBP18.45■□□□□ 0.54
PCDHGA6-202ENST00000610583 FTSJ3Q8IY81 847 aaKnown RBP18.45■□□□□ 0.54
PCDHGA6-202ENST00000610583 SETD5Q9C0A6 1442 aa18.44■□□□□ 0.54
PCDHGA6-202ENST00000610583 NBR1Q14596 966 aa18.44■□□□□ 0.54
PCDHGA6-202ENST00000610583 LAS1LQ9Y4W2 734 aaKnown RBP18.44■□□□□ 0.54
PCDHGA6-202ENST00000610583 SUPT16HQ9Y5B9 1047 aaKnown RBP18.42■□□□□ 0.54
PCDHGA6-202ENST00000610583 ARXQ96QS3 562 aa18.42■□□□□ 0.54
PCDHGA6-202ENST00000610583 KANK4Q5T7N3 995 aaPredicted RBP18.42■□□□□ 0.54
PCDHGA6-202ENST00000610583 FMN1Q68DA7 1419 aa18.41■□□□□ 0.54
PCDHGA6-202ENST00000610583 GGT6Q6P531 493 aa18.41■□□□□ 0.54
PCDHGA6-202ENST00000610583 BECN1Q14457 450 aa18.4■□□□□ 0.54
PCDHGA6-202ENST00000610583 TOP2AP11388 1531 aaKnown RBP18.4■□□□□ 0.54
PCDHGA6-202ENST00000610583 PKD2Q13563 968 aa18.4■□□□□ 0.54
PCDHGA6-202ENST00000610583 U2SURPO15042 1029 aaKnown RBP18.39■□□□□ 0.53
PCDHGA6-202ENST00000610583 DDRGK1Q96HY6 314 aa18.39■□□□□ 0.53
PCDHGA6-202ENST00000610583 CADPSQ9ULU8 1353 aa18.38■□□□□ 0.53
PCDHGA6-202ENST00000610583 PNNQ9H307 717 aaKnown RBP18.37■□□□□ 0.53
PCDHGA6-202ENST00000610583 EFCAB2Q5VUJ9 269 aa18.37■□□□□ 0.53
PCDHGA6-202ENST00000610583 SRPK2P78362 688 aaKnown RBP18.36■□□□□ 0.53
PCDHGA6-202ENST00000610583 WIZO95785 1651 aa18.35■□□□□ 0.53
PCDHGA6-202ENST00000610583 FRAT1Q92837 279 aaPredicted RBP18.33■□□□□ 0.53
PCDHGA6-202ENST00000610583 CASC1Q6TDU7 716 aa18.33■□□□□ 0.52
PCDHGA6-202ENST00000610583 SAFB2Q14151 953 aaKnown RBP eCLIP18.32■□□□□ 0.52
PCDHGA6-202ENST00000610583 FOXD1Q16676 465 aa18.31■□□□□ 0.52
PCDHGA6-202ENST00000610583 HSPA5P11021 654 aaKnown RBP18.31■□□□□ 0.52
PCDHGA6-202ENST00000610583 CHMP4BQ9H444 224 aaKnown RBP18.31■□□□□ 0.52
PCDHGA6-202ENST00000610583 ANKRD30AQ9BXX3 1397 aa18.3■□□□□ 0.52
PCDHGA6-202ENST00000610583 EIF5BO60841 1220 aaKnown RBP18.3■□□□□ 0.52
PCDHGA6-202ENST00000610583 MORC1Q86VD1 984 aa18.3■□□□□ 0.52
PCDHGA6-202ENST00000610583 MS4A1P11836 297 aa18.29■□□□□ 0.52
PCDHGA6-202ENST00000610583 NCLP19338 710 aaKnown RBP18.29■□□□□ 0.52
PCDHGA6-202ENST00000610583 NUP155O75694 1391 aa18.29■□□□□ 0.52
PCDHGA6-202ENST00000610583 RAPGEF2Q9Y4G8 1499 aa18.29■□□□□ 0.52
PCDHGA6-202ENST00000610583 MPHOSPH9Q99550 1183 aa18.29■□□□□ 0.52
PCDHGA6-202ENST00000610583 PPP4R2Q9NY27 417 aa18.27■□□□□ 0.52
PCDHGA6-202ENST00000610583 STK26Q9P289 416 aa18.27■□□□□ 0.52
PCDHGA6-202ENST00000610583 GOLGA6L22H0YM25 854 aa18.26■□□□□ 0.51
PCDHGA6-202ENST00000610583 SOX12O15370 315 aa18.26■□□□□ 0.51
PCDHGA6-202ENST00000610583 ATAD2BQ9ULI0 1458 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms