RNA–Protein interactions for RNA: ENST00000609858.1

AC004948.1-201, humanhuman

BASIC

Gene AC004948.1, Length 672 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004948.1-201ENST00000609858 GALR2O43603 387 aaPredicted RBP12.4□□□□□ -0.42
AC004948.1-201ENST00000609858 PHF12Q96QT6 1004 aa12.4□□□□□ -0.42
AC004948.1-201ENST00000609858 PLSCR2Q9NRY7 297 aa12.4□□□□□ -0.42
AC004948.1-201ENST00000609858 CUX2O14529 1486 aa12.4□□□□□ -0.43
AC004948.1-201ENST00000609858 EIF4G1Q04637 1599 aaKnown RBP12.38□□□□□ -0.43
AC004948.1-201ENST00000609858 MNX1P50219 401 aaPredicted RBP12.37□□□□□ -0.43
AC004948.1-201ENST00000609858 DCAF8L2P0C7V8 631 aa12.36□□□□□ -0.43
AC004948.1-201ENST00000609858 PROM2Q8N271 834 aa12.35□□□□□ -0.43
AC004948.1-201ENST00000609858 FKBP8Q14318 412 aa12.31□□□□□ -0.44
AC004948.1-201ENST00000609858 PLEKHG5O94827 1062 aa12.3□□□□□ -0.44
AC004948.1-201ENST00000609858 TSPYL2Q9H2G4 693 aaPredicted RBP12.28□□□□□ -0.44
AC004948.1-201ENST00000609858 MIER1Q8N108 512 aa12.24□□□□□ -0.45
AC004948.1-201ENST00000609858 MS4A3Q96HJ5 214 aa12.22□□□□□ -0.45
AC004948.1-201ENST00000609858 SHROOM4Q9ULL8 1493 aa12.17□□□□□ -0.46
AC004948.1-201ENST00000609858 PLCD3Q8N3E9 789 aa12.17□□□□□ -0.46
AC004948.1-201ENST00000609858 CCDC61Q9Y6R9 512 aa12.13□□□□□ -0.47
AC004948.1-201ENST00000609858 ERCC6Q03468 1493 aa12.13□□□□□ -0.47
AC004948.1-201ENST00000609858 PELP1Q8IZL8 1130 aaKnown RBP12.11□□□□□ -0.47
AC004948.1-201ENST00000609858 ASTLQ6HA08 431 aaPredicted RBP12.09□□□□□ -0.47
AC004948.1-201ENST00000609858 RASEFQ8IZ41 740 aa12.09□□□□□ -0.47
AC004948.1-201ENST00000609858 METRNQ9UJH8 293 aa12.09□□□□□ -0.47
AC004948.1-201ENST00000609858 ATMINO43313 823 aaPredicted RBP12.08□□□□□ -0.48
AC004948.1-201ENST00000609858 KIF12Q96FN5 646 aa12.07□□□□□ -0.48
AC004948.1-201ENST00000609858 POTEB2H3BUK9 544 aa12.06□□□□□ -0.48
AC004948.1-201ENST00000609858 SLC39A7Q92504 469 aa12.06□□□□□ -0.48
AC004948.1-201ENST00000609858 OTUD5Q96G74 571 aa12.05□□□□□ -0.48
AC004948.1-201ENST00000609858 ZBTB47Q9UFB7 747 aaPredicted RBP12.05□□□□□ -0.48
AC004948.1-201ENST00000609858 C7P10643 843 aa12.03□□□□□ -0.48
AC004948.1-201ENST00000609858 MAP3K13O43283 966 aa12.02□□□□□ -0.49
AC004948.1-201ENST00000609858 MYO15BQ96JP2 1530 aa12.01□□□□□ -0.49
AC004948.1-201ENST00000609858 ATN1P54259 1190 aaPredicted RBP12□□□□□ -0.49
AC004948.1-201ENST00000609858 BMP2KQ9NSY1 1161 aaPredicted RBP11.98□□□□□ -0.49
AC004948.1-201ENST00000609858 SCRIBQ14160 1630 aa11.97□□□□□ -0.49
AC004948.1-201ENST00000609858 TRPC6Q9Y210 931 aa11.97□□□□□ -0.49
AC004948.1-201ENST00000609858 FAM212AQ96EL1 285 aa11.94□□□□□ -0.5
AC004948.1-201ENST00000609858 PCDHB13Q9Y5F0 798 aa11.94□□□□□ -0.5
AC004948.1-201ENST00000609858 TIE1P35590 1138 aa11.93□□□□□ -0.5
AC004948.1-201ENST00000609858 NUBP1P53384 320 aa11.91□□□□□ -0.5
AC004948.1-201ENST00000609858 MAMSTRQ6ZN01 415 aa11.91□□□□□ -0.5
AC004948.1-201ENST00000609858 THOC2Q8NI27 1593 aaKnown RBP11.91□□□□□ -0.5
AC004948.1-201ENST00000609858 POTEMA6NI47 508 aa11.89□□□□□ -0.51
AC004948.1-201ENST00000609858 SCUBE2Q9NQ36 999 aa11.89□□□□□ -0.51
AC004948.1-201ENST00000609858 TTLL13PA6NNM8 815 aa11.88□□□□□ -0.51
AC004948.1-201ENST00000609858 SEC24BO95487 1268 aa11.87□□□□□ -0.51
AC004948.1-201ENST00000609858 FBXO3Q9UK99 471 aa11.87□□□□□ -0.51
AC004948.1-201ENST00000609858 POTEJP0CG39 1038 aa11.86□□□□□ -0.51
AC004948.1-201ENST00000609858 NESP48681 1621 aa11.86□□□□□ -0.51
AC004948.1-201ENST00000609858 SGIP1Q9BQI5 828 aa11.85□□□□□ -0.51
AC004948.1-201ENST00000609858 POTEGQ6S5H5 508 aa11.83□□□□□ -0.52
AC004948.1-201ENST00000609858 IFNL1Q8IU54 200 aa11.83□□□□□ -0.52
AC004948.1-201ENST00000609858 TRIM35Q9UPQ4 493 aa11.83□□□□□ -0.52
AC004948.1-201ENST00000609858 DCAF8Q5TAQ9 597 aa11.82□□□□□ -0.52
AC004948.1-201ENST00000609858 POTEFA5A3E0 1075 aa11.79□□□□□ -0.52
AC004948.1-201ENST00000609858 TMEM106CQ9BVX2 250 aa11.79□□□□□ -0.52
AC004948.1-201ENST00000609858 KLHL34Q8N239 644 aa11.78□□□□□ -0.52
AC004948.1-201ENST00000609858 PYGBP11216 843 aa11.77□□□□□ -0.53
AC004948.1-201ENST00000609858 COLQQ9Y215 455 aaPredicted RBP11.77□□□□□ -0.53
AC004948.1-201ENST00000609858 BAZ1AQ9NRL2 1556 aaPredicted RBP11.76□□□□□ -0.53
AC004948.1-201ENST00000609858 RIMBP3CA6NJZ7 1639 aa11.76□□□□□ -0.53
AC004948.1-201ENST00000609858 RIMBP3BA6NNM3 1639 aa11.76□□□□□ -0.53
AC004948.1-201ENST00000609858 RIMBP3Q9UFD9 1639 aa11.76□□□□□ -0.53
AC004948.1-201ENST00000609858 IER5LQ5T953 404 aa11.75□□□□□ -0.53
AC004948.1-201ENST00000609858 PCDH10Q9P2E7 1040 aa11.75□□□□□ -0.53
AC004948.1-201ENST00000609858 ILDR1Q86SU0 546 aaPredicted RBP11.74□□□□□ -0.53
AC004948.1-201ENST00000609858 SMARCA2P51531 1590 aa11.74□□□□□ -0.53
AC004948.1-201ENST00000609858 VASPP50552 380 aaPredicted RBP11.73□□□□□ -0.53
AC004948.1-201ENST00000609858 KIF21AQ7Z4S6 1674 aa11.73□□□□□ -0.53
AC004948.1-201ENST00000609858 FAM163AQ96GL9 167 aaPredicted RBP11.72□□□□□ -0.53
AC004948.1-201ENST00000609858 PLCG2P16885 1265 aa11.7□□□□□ -0.54
AC004948.1-201ENST00000609858 PCDHB8Q9UN66 801 aa11.67□□□□□ -0.54
AC004948.1-201ENST00000609858 GSE1Q14687 1217 aa11.65□□□□□ -0.54
AC004948.1-201ENST00000609858 SLAIN1Q8ND83 568 aa11.61□□□□□ -0.55
AC004948.1-201ENST00000609858 LCE2DQ5TA82 110 aaPredicted RBP11.6□□□□□ -0.55
AC004948.1-201ENST00000609858 NCAPD3P42695 1498 aa11.59□□□□□ -0.55
AC004948.1-201ENST00000609858 IRX5P78411 483 aaPredicted RBP11.59□□□□□ -0.55
AC004948.1-201ENST00000609858 GOLGA2Q08379 1002 aa11.58□□□□□ -0.56
AC004948.1-201ENST00000609858 ZNF467Q7Z7K2 595 aaPredicted RBP11.58□□□□□ -0.56
AC004948.1-201ENST00000609858 IFNLR1Q8IU57 520 aaPredicted RBP11.58□□□□□ -0.56
AC004948.1-201ENST00000609858 OCEL1Q9H607 264 aa11.57□□□□□ -0.56
AC004948.1-201ENST00000609858 ARHGEF11O15085 1522 aa11.56□□□□□ -0.56
AC004948.1-201ENST00000609858 RTN4Q9NQC3 1192 aaKnown RBP11.56□□□□□ -0.56
AC004948.1-201ENST00000609858 DCAF1Q9Y4B6 1507 aa11.55□□□□□ -0.56
AC004948.1-201ENST00000609858 ZCCHC6Q5VYS8 1495 aaKnown RBP11.52□□□□□ -0.56
AC004948.1-201ENST00000609858 LAMC3Q9Y6N6 1575 aa11.52□□□□□ -0.57
AC004948.1-201ENST00000609858 MKRN3Q13064 507 aaKnown RBP11.51□□□□□ -0.57
AC004948.1-201ENST00000609858 CYB5RLQ6IPT4 315 aa11.51□□□□□ -0.57
AC004948.1-201ENST00000609858 CIZ1Q9ULV3 898 aaPredicted RBP11.51□□□□□ -0.57
AC004948.1-201ENST00000609858 SPOCK2Q92563 424 aa11.5□□□□□ -0.57
AC004948.1-201ENST00000609858 PSEN1P49768 467 aa11.48□□□□□ -0.57
AC004948.1-201ENST00000609858 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.48□□□□□ -0.57
AC004948.1-201ENST00000609858 ATAD2BQ9ULI0 1458 aa11.47□□□□□ -0.57
AC004948.1-201ENST00000609858 CHRM1P11229 460 aaPredicted RBP11.47□□□□□ -0.57
AC004948.1-201ENST00000609858 AMER1Q5JTC6 1135 aaPredicted RBP11.47□□□□□ -0.57
AC004948.1-201ENST00000609858 WDR62O43379 1518 aa11.46□□□□□ -0.57
AC004948.1-201ENST00000609858 HMGXB3Q12766 1538 aa11.45□□□□□ -0.58
AC004948.1-201ENST00000609858 ST18O60284 1047 aa11.44□□□□□ -0.58
AC004948.1-201ENST00000609858 C3orf67Q6ZVT6 689 aa11.44□□□□□ -0.58
AC004948.1-201ENST00000609858 MRC2Q9UBG0 1479 aa11.44□□□□□ -0.58
AC004948.1-201ENST00000609858 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.43□□□□□ -0.58
AC004948.1-201ENST00000609858 PDAP1Q13442 181 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms