RNA–Protein interactions for RNA: ENST00000609768.5

CCDC144B-205, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 5

Gene CCDC144B, Length 901 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-205ENST00000609768 SLC39A7Q92504 469 aa12.75□□□□□ -0.37
CCDC144B-205ENST00000609768 MS4A3Q96HJ5 214 aa12.71□□□□□ -0.37
CCDC144B-205ENST00000609768 PAK3O75914 559 aaPredicted RBP12.68□□□□□ -0.38
CCDC144B-205ENST00000609768 MNX1P50219 401 aaPredicted RBP12.68□□□□□ -0.38
CCDC144B-205ENST00000609768 POTEFA5A3E0 1075 aa12.67□□□□□ -0.38
CCDC144B-205ENST00000609768 CDAN1Q8IWY9 1227 aa12.64□□□□□ -0.39
CCDC144B-205ENST00000609768 SCUBE2Q9NQ36 999 aa12.62□□□□□ -0.39
CCDC144B-205ENST00000609768 STAG3Q9UJ98 1225 aa12.6□□□□□ -0.39
CCDC144B-205ENST00000609768 ATN1P54259 1190 aaPredicted RBP12.59□□□□□ -0.39
CCDC144B-205ENST00000609768 NPM1P06748 294 aaKnown RBP eCLIP12.52□□□□□ -0.41
CCDC144B-205ENST00000609768 BMP2KQ9NSY1 1161 aaPredicted RBP12.45□□□□□ -0.42
CCDC144B-205ENST00000609768 MMRN1Q13201 1228 aa12.44□□□□□ -0.42
CCDC144B-205ENST00000609768 TRPC6Q9Y210 931 aa12.44□□□□□ -0.42
CCDC144B-205ENST00000609768 COLQQ9Y215 455 aaPredicted RBP12.42□□□□□ -0.42
CCDC144B-205ENST00000609768 CCDC61Q9Y6R9 512 aa12.41□□□□□ -0.42
CCDC144B-205ENST00000609768 SPNS2Q8IVW8 549 aa12.39□□□□□ -0.43
CCDC144B-205ENST00000609768 ST18O60284 1047 aa12.38□□□□□ -0.43
CCDC144B-205ENST00000609768 KIF12Q96FN5 646 aa12.38□□□□□ -0.43
CCDC144B-205ENST00000609768 TIE1P35590 1138 aa12.31□□□□□ -0.44
CCDC144B-205ENST00000609768 TSPYL2Q9H2G4 693 aaPredicted RBP12.31□□□□□ -0.44
CCDC144B-205ENST00000609768 SPDYE4A6NLX3 237 aa12.25□□□□□ -0.45
CCDC144B-205ENST00000609768 TTLL13PA6NNM8 815 aa12.24□□□□□ -0.45
CCDC144B-205ENST00000609768 MAP3K13O43283 966 aa12.24□□□□□ -0.45
CCDC144B-205ENST00000609768 SLAIN1Q8ND83 568 aa12.22□□□□□ -0.45
CCDC144B-205ENST00000609768 SEC24BO95487 1268 aa12.2□□□□□ -0.46
CCDC144B-205ENST00000609768 IER5LQ5T953 404 aa12.18□□□□□ -0.46
CCDC144B-205ENST00000609768 TMEM121BQ9BXQ6 578 aaPredicted RBP12.13□□□□□ -0.47
CCDC144B-205ENST00000609768 TRIM35Q9UPQ4 493 aa12.13□□□□□ -0.47
CCDC144B-205ENST00000609768 RASEFQ8IZ41 740 aa12.06□□□□□ -0.48
CCDC144B-205ENST00000609768 MARVELD3Q96A59 401 aa12.05□□□□□ -0.48
CCDC144B-205ENST00000609768 KRTAP3-3Q9BYR6 98 aa12.02□□□□□ -0.49
CCDC144B-205ENST00000609768 KRTAP3-2Q9BYR7 98 aa12.02□□□□□ -0.49
CCDC144B-205ENST00000609768 IRX5P78411 483 aaPredicted RBP11.99□□□□□ -0.49
CCDC144B-205ENST00000609768 SGIP1Q9BQI5 828 aa11.99□□□□□ -0.49
CCDC144B-205ENST00000609768 POTEB3A0JP26 581 aa11.98□□□□□ -0.49
CCDC144B-205ENST00000609768 POTEBQ6S5H4 581 aa11.98□□□□□ -0.49
CCDC144B-205ENST00000609768 PROM2Q8N271 834 aa11.98□□□□□ -0.49
CCDC144B-205ENST00000609768 SNPHO15079 494 aa11.93□□□□□ -0.5
CCDC144B-205ENST00000609768 PLCG2P16885 1265 aa11.93□□□□□ -0.5
CCDC144B-205ENST00000609768 PCDHB13Q9Y5F0 798 aa11.93□□□□□ -0.5
CCDC144B-205ENST00000609768 IFNL1Q8IU54 200 aa11.91□□□□□ -0.5
CCDC144B-205ENST00000609768 TMEM106CQ9BVX2 250 aa11.88□□□□□ -0.51
CCDC144B-205ENST00000609768 CSRNP3Q8WYN3 585 aa11.87□□□□□ -0.51
CCDC144B-205ENST00000609768 HS3ST6Q96QI5 342 aa11.85□□□□□ -0.51
CCDC144B-205ENST00000609768 EMP3P54852 163 aa11.84□□□□□ -0.51
CCDC144B-205ENST00000609768 OCEL1Q9H607 264 aa11.83□□□□□ -0.52
CCDC144B-205ENST00000609768 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.82□□□□□ -0.52
CCDC144B-205ENST00000609768 FAM205CA6NFA0 338 aa11.76□□□□□ -0.53
CCDC144B-205ENST00000609768 NUBP1P53384 320 aa11.75□□□□□ -0.53
CCDC144B-205ENST00000609768 MIER1Q8N108 512 aa11.73□□□□□ -0.53
CCDC144B-205ENST00000609768 PDCD7Q8N8D1 485 aaKnown RBP11.7□□□□□ -0.54
CCDC144B-205ENST00000609768 PLEKHG5O94827 1062 aa11.66□□□□□ -0.54
CCDC144B-205ENST00000609768 RNF166Q96A37 237 aaPredicted RBP11.62□□□□□ -0.55
CCDC144B-205ENST00000609768 EHMT2Q96KQ7 1210 aa11.61□□□□□ -0.55
CCDC144B-205ENST00000609768 HOXB3P14651 431 aaPredicted RBP11.57□□□□□ -0.56
CCDC144B-205ENST00000609768 C3orf67Q6ZVT6 689 aa11.57□□□□□ -0.56
CCDC144B-205ENST00000609768 FAM212AQ96EL1 285 aa11.53□□□□□ -0.56
CCDC144B-205ENST00000609768 L3MBTL3Q96JM7 780 aaPredicted RBP11.52□□□□□ -0.57
CCDC144B-205ENST00000609768 PCDHB8Q9UN66 801 aa11.52□□□□□ -0.57
CCDC144B-205ENST00000609768 HOXB1P14653 301 aaPredicted RBP11.49□□□□□ -0.57
CCDC144B-205ENST00000609768 PLCD3Q8N3E9 789 aa11.49□□□□□ -0.57
CCDC144B-205ENST00000609768 MYT1LQ9UL68 1186 aa11.49□□□□□ -0.57
CCDC144B-205ENST00000609768 ILDR1Q86SU0 546 aaPredicted RBP11.47□□□□□ -0.57
CCDC144B-205ENST00000609768 PYGBP11216 843 aa11.45□□□□□ -0.58
CCDC144B-205ENST00000609768 ZBTB47Q9UFB7 747 aaPredicted RBP11.44□□□□□ -0.58
CCDC144B-205ENST00000609768 ERBB3P21860 1342 aa11.39□□□□□ -0.59
CCDC144B-205ENST00000609768 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.38□□□□□ -0.59
CCDC144B-205ENST00000609768 DPY19L2Q6NUT2 758 aa11.37□□□□□ -0.59
CCDC144B-205ENST00000609768 MKRN3Q13064 507 aaKnown RBP11.36□□□□□ -0.59
CCDC144B-205ENST00000609768 VARS2Q5ST30 1063 aaKnown RBP11.34□□□□□ -0.59
CCDC144B-205ENST00000609768 DCAF8Q5TAQ9 597 aa11.32□□□□□ -0.6
CCDC144B-205ENST00000609768 ZNF687Q8N1G0 1237 aa11.31□□□□□ -0.6
CCDC144B-205ENST00000609768 ZNF710Q8N1W2 664 aa11.3□□□□□ -0.6
CCDC144B-205ENST00000609768 PTGER2P43116 358 aa11.29□□□□□ -0.6
CCDC144B-205ENST00000609768 DOK7Q18PE1 504 aa11.28□□□□□ -0.6
CCDC144B-205ENST00000609768 GOLGA2Q08379 1002 aa11.26□□□□□ -0.61
CCDC144B-205ENST00000609768 BOLA1Q9Y3E2 137 aa11.26□□□□□ -0.61
CCDC144B-205ENST00000609768 ZNF467Q7Z7K2 595 aaPredicted RBP11.24□□□□□ -0.61
CCDC144B-205ENST00000609768 PSEN1P49768 467 aa11.21□□□□□ -0.61
CCDC144B-205ENST00000609768 GPR153Q6NV75 609 aa11.18□□□□□ -0.62
CCDC144B-205ENST00000609768 PLA2G2EQ9NZK7 142 aa11.17□□□□□ -0.62
CCDC144B-205ENST00000609768 CHRM1P11229 460 aaPredicted RBP11.16□□□□□ -0.62
CCDC144B-205ENST00000609768 ZSWIM6Q9HCJ5 1215 aa11.16□□□□□ -0.62
CCDC144B-205ENST00000609768 RIMBP2O15034 1052 aa11.14□□□□□ -0.63
CCDC144B-205ENST00000609768 TMEM92Q6UXU6 159 aa11.14□□□□□ -0.63
CCDC144B-205ENST00000609768 ANKRD13DQ6ZTN6 518 aa11.13□□□□□ -0.63
CCDC144B-205ENST00000609768 LSM11P83369 360 aaKnown RBP eCLIP11.09□□□□□ -0.63
CCDC144B-205ENST00000609768 G3V3G9 751 aa11.08□□□□□ -0.64
CCDC144B-205ENST00000609768 PDAP1Q13442 181 aaKnown RBP11.06□□□□□ -0.64
CCDC144B-205ENST00000609768 CABP2Q9NPB3 220 aa11.06□□□□□ -0.64
CCDC144B-205ENST00000609768 GSE1Q14687 1217 aa11.03□□□□□ -0.64
CCDC144B-205ENST00000609768 ARSIQ5FYB1 569 aa11□□□□□ -0.65
CCDC144B-205ENST00000609768 POTEEQ6S8J3 1075 aa11□□□□□ -0.65
CCDC144B-205ENST00000609768 ZNF316A6NFI3 1004 aaPredicted RBP10.99□□□□□ -0.65
CCDC144B-205ENST00000609768 HCSTQ9UBK5 93 aa10.99□□□□□ -0.65
CCDC144B-205ENST00000609768 KHSRPQ92945 711 aaKnown RBP eCLIP10.97□□□□□ -0.65
CCDC144B-205ENST00000609768 MICALL2Q8IY33 904 aa10.96□□□□□ -0.65
CCDC144B-205ENST00000609768 PBX2P40425 430 aa10.89□□□□□ -0.67
CCDC144B-205ENST00000609768 EFCAB3Q8N7B9 438 aa10.87□□□□□ -0.67
CCDC144B-205ENST00000609768 AXIN2Q9Y2T1 843 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms