RNA–Protein interactions for RNA: ENST00000609154.1

CRLS1-207, Transcript of cardiolipin synthase 1, humanhuman

TSL 1 (best)

Gene CRLS1, Length 977 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLS1-207ENST00000609154 STAG3Q9UJ98 1225 aa12.84□□□□□ -0.35
CRLS1-207ENST00000609154 ASTLQ6HA08 431 aaPredicted RBP12.82□□□□□ -0.36
CRLS1-207ENST00000609154 SCUBE2Q9NQ36 999 aa12.81□□□□□ -0.36
CRLS1-207ENST00000609154 ATMINO43313 823 aaPredicted RBP12.78□□□□□ -0.36
CRLS1-207ENST00000609154 EHMT2Q96KQ7 1210 aa12.78□□□□□ -0.36
CRLS1-207ENST00000609154 NPM1P06748 294 aaKnown RBP eCLIP12.77□□□□□ -0.37
CRLS1-207ENST00000609154 MS4A3Q96HJ5 214 aa12.74□□□□□ -0.37
CRLS1-207ENST00000609154 CDAN1Q8IWY9 1227 aa12.69□□□□□ -0.38
CRLS1-207ENST00000609154 ATN1P54259 1190 aaPredicted RBP12.62□□□□□ -0.39
CRLS1-207ENST00000609154 MNX1P50219 401 aaPredicted RBP12.59□□□□□ -0.39
CRLS1-207ENST00000609154 CSRNP3Q8WYN3 585 aa12.55□□□□□ -0.4
CRLS1-207ENST00000609154 TSPYL2Q9H2G4 693 aaPredicted RBP12.53□□□□□ -0.4
CRLS1-207ENST00000609154 POTEFA5A3E0 1075 aa12.52□□□□□ -0.41
CRLS1-207ENST00000609154 SEC24BO95487 1268 aa12.48□□□□□ -0.41
CRLS1-207ENST00000609154 BMP2KQ9NSY1 1161 aaPredicted RBP12.46□□□□□ -0.41
CRLS1-207ENST00000609154 SPDYE4A6NLX3 237 aa12.45□□□□□ -0.42
CRLS1-207ENST00000609154 MMRN1Q13201 1228 aa12.43□□□□□ -0.42
CRLS1-207ENST00000609154 CCDC61Q9Y6R9 512 aa12.43□□□□□ -0.42
CRLS1-207ENST00000609154 ST18O60284 1047 aa12.41□□□□□ -0.42
CRLS1-207ENST00000609154 KIF12Q96FN5 646 aa12.41□□□□□ -0.42
CRLS1-207ENST00000609154 COLQQ9Y215 455 aaPredicted RBP12.4□□□□□ -0.42
CRLS1-207ENST00000609154 TRPC6Q9Y210 931 aa12.39□□□□□ -0.43
CRLS1-207ENST00000609154 TIE1P35590 1138 aa12.37□□□□□ -0.43
CRLS1-207ENST00000609154 SPNS2Q8IVW8 549 aa12.37□□□□□ -0.43
CRLS1-207ENST00000609154 SLAIN1Q8ND83 568 aa12.37□□□□□ -0.43
CRLS1-207ENST00000609154 MAP3K13O43283 966 aa12.32□□□□□ -0.44
CRLS1-207ENST00000609154 TTLL13PA6NNM8 815 aa12.29□□□□□ -0.44
CRLS1-207ENST00000609154 IER5LQ5T953 404 aa12.24□□□□□ -0.45
CRLS1-207ENST00000609154 TRIM35Q9UPQ4 493 aa12.24□□□□□ -0.45
CRLS1-207ENST00000609154 TMEM121BQ9BXQ6 578 aaPredicted RBP12.2□□□□□ -0.46
CRLS1-207ENST00000609154 MARVELD3Q96A59 401 aa12.15□□□□□ -0.46
CRLS1-207ENST00000609154 SNPHO15079 494 aa12.13□□□□□ -0.47
CRLS1-207ENST00000609154 PLCG2P16885 1265 aa12.13□□□□□ -0.47
CRLS1-207ENST00000609154 PLEKHG5O94827 1062 aa12.12□□□□□ -0.47
CRLS1-207ENST00000609154 RASEFQ8IZ41 740 aa12.11□□□□□ -0.47
CRLS1-207ENST00000609154 PCDHB13Q9Y5F0 798 aa12.11□□□□□ -0.47
CRLS1-207ENST00000609154 SGIP1Q9BQI5 828 aa12.08□□□□□ -0.48
CRLS1-207ENST00000609154 MIER1Q8N108 512 aa12.03□□□□□ -0.48
CRLS1-207ENST00000609154 TMEM106CQ9BVX2 250 aa12.03□□□□□ -0.48
CRLS1-207ENST00000609154 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.02□□□□□ -0.49
CRLS1-207ENST00000609154 IRX5P78411 483 aaPredicted RBP11.99□□□□□ -0.49
CRLS1-207ENST00000609154 IFNL1Q8IU54 200 aa11.99□□□□□ -0.49
CRLS1-207ENST00000609154 EMP3P54852 163 aa11.98□□□□□ -0.49
CRLS1-207ENST00000609154 OCEL1Q9H607 264 aa11.96□□□□□ -0.49
CRLS1-207ENST00000609154 KRTAP3-3Q9BYR6 98 aa11.92□□□□□ -0.5
CRLS1-207ENST00000609154 KRTAP3-2Q9BYR7 98 aa11.92□□□□□ -0.5
CRLS1-207ENST00000609154 FAM205CA6NFA0 338 aa11.91□□□□□ -0.5
CRLS1-207ENST00000609154 HS3ST6Q96QI5 342 aa11.91□□□□□ -0.5
CRLS1-207ENST00000609154 PROM2Q8N271 834 aa11.9□□□□□ -0.5
CRLS1-207ENST00000609154 POTEB3A0JP26 581 aa11.86□□□□□ -0.51
CRLS1-207ENST00000609154 POTEBQ6S5H4 581 aa11.86□□□□□ -0.51
CRLS1-207ENST00000609154 PLCD3Q8N3E9 789 aa11.84□□□□□ -0.51
CRLS1-207ENST00000609154 C3orf67Q6ZVT6 689 aa11.83□□□□□ -0.52
CRLS1-207ENST00000609154 NUBP1P53384 320 aa11.78□□□□□ -0.52
CRLS1-207ENST00000609154 FAM212AQ96EL1 285 aa11.78□□□□□ -0.52
CRLS1-207ENST00000609154 ZBTB47Q9UFB7 747 aaPredicted RBP11.78□□□□□ -0.52
CRLS1-207ENST00000609154 RNF166Q96A37 237 aaPredicted RBP11.74□□□□□ -0.53
CRLS1-207ENST00000609154 L3MBTL3Q96JM7 780 aaPredicted RBP11.72□□□□□ -0.53
CRLS1-207ENST00000609154 PDCD7Q8N8D1 485 aaKnown RBP11.67□□□□□ -0.54
CRLS1-207ENST00000609154 PYGBP11216 843 aa11.66□□□□□ -0.54
CRLS1-207ENST00000609154 GOLGA2Q08379 1002 aa11.66□□□□□ -0.54
CRLS1-207ENST00000609154 PCDHB8Q9UN66 801 aa11.65□□□□□ -0.54
CRLS1-207ENST00000609154 MKRN3Q13064 507 aaKnown RBP11.63□□□□□ -0.55
CRLS1-207ENST00000609154 MYT1LQ9UL68 1186 aa11.62□□□□□ -0.55
CRLS1-207ENST00000609154 ERBB3P21860 1342 aa11.61□□□□□ -0.55
CRLS1-207ENST00000609154 DCAF8Q5TAQ9 597 aa11.61□□□□□ -0.55
CRLS1-207ENST00000609154 ZNF710Q8N1W2 664 aa11.58□□□□□ -0.56
CRLS1-207ENST00000609154 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.57□□□□□ -0.56
CRLS1-207ENST00000609154 HOXB1P14653 301 aaPredicted RBP11.54□□□□□ -0.56
CRLS1-207ENST00000609154 HOXB3P14651 431 aaPredicted RBP11.52□□□□□ -0.57
CRLS1-207ENST00000609154 G3V3G9 751 aa11.5□□□□□ -0.57
CRLS1-207ENST00000609154 DOK7Q18PE1 504 aa11.48□□□□□ -0.57
CRLS1-207ENST00000609154 VARS2Q5ST30 1063 aaKnown RBP11.48□□□□□ -0.57
CRLS1-207ENST00000609154 ZNF467Q7Z7K2 595 aaPredicted RBP11.44□□□□□ -0.58
CRLS1-207ENST00000609154 PTGER2P43116 358 aa11.43□□□□□ -0.58
CRLS1-207ENST00000609154 DPY19L2Q6NUT2 758 aa11.43□□□□□ -0.58
CRLS1-207ENST00000609154 RIMBP2O15034 1052 aa11.42□□□□□ -0.58
CRLS1-207ENST00000609154 BOLA1Q9Y3E2 137 aa11.41□□□□□ -0.58
CRLS1-207ENST00000609154 ZNF687Q8N1G0 1237 aa11.4□□□□□ -0.58
CRLS1-207ENST00000609154 PSEN1P49768 467 aa11.37□□□□□ -0.59
CRLS1-207ENST00000609154 ANKRD13DQ6ZTN6 518 aa11.35□□□□□ -0.59
CRLS1-207ENST00000609154 ILDR1Q86SU0 546 aaPredicted RBP11.34□□□□□ -0.59
CRLS1-207ENST00000609154 PLA2G2EQ9NZK7 142 aa11.3□□□□□ -0.6
CRLS1-207ENST00000609154 GSE1Q14687 1217 aa11.29□□□□□ -0.6
CRLS1-207ENST00000609154 FKBP8Q14318 412 aa11.28□□□□□ -0.6
CRLS1-207ENST00000609154 ZSWIM6Q9HCJ5 1215 aa11.27□□□□□ -0.61
CRLS1-207ENST00000609154 CABP2Q9NPB3 220 aa11.27□□□□□ -0.61
CRLS1-207ENST00000609154 CHRM1P11229 460 aaPredicted RBP11.23□□□□□ -0.61
CRLS1-207ENST00000609154 PDAP1Q13442 181 aaKnown RBP11.22□□□□□ -0.61
CRLS1-207ENST00000609154 GPR153Q6NV75 609 aa11.2□□□□□ -0.62
CRLS1-207ENST00000609154 LSM11P83369 360 aaKnown RBP eCLIP11.17□□□□□ -0.62
CRLS1-207ENST00000609154 KLHL34Q8N239 644 aa11.16□□□□□ -0.62
CRLS1-207ENST00000609154 HCSTQ9UBK5 93 aa11.15□□□□□ -0.62
CRLS1-207ENST00000609154 ARSIQ5FYB1 569 aa11.13□□□□□ -0.63
CRLS1-207ENST00000609154 ZNF316A6NFI3 1004 aaPredicted RBP11.09□□□□□ -0.63
CRLS1-207ENST00000609154 TMEM92Q6UXU6 159 aa11.09□□□□□ -0.63
CRLS1-207ENST00000609154 MICALL2Q8IY33 904 aa11.05□□□□□ -0.64
CRLS1-207ENST00000609154 KHSRPQ92945 711 aaKnown RBP eCLIP11.04□□□□□ -0.648e-7■■■□□ 15.2
CRLS1-207ENST00000609154 FBXO3Q9UK99 471 aa11.04□□□□□ -0.64
CRLS1-207ENST00000609154 EFCAB3Q8N7B9 438 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms