RNA–Protein interactions for RNA: ENST00000603717.1

AC008555.3-201, humanhuman

TSL 3 BASIC

Gene AC008555.3, Length 442 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008555.3-201ENST00000603717 SLC39A7Q92504 469 aa14.38□□□□□ -0.11
AC008555.3-201ENST00000603717 ATMINO43313 823 aaPredicted RBP14.36□□□□□ -0.11
AC008555.3-201ENST00000603717 SCUBE2Q9NQ36 999 aa14.32□□□□□ -0.12
AC008555.3-201ENST00000603717 MS4A3Q96HJ5 214 aa14.27□□□□□ -0.13
AC008555.3-201ENST00000603717 PAK3O75914 559 aaPredicted RBP14.26□□□□□ -0.13
AC008555.3-201ENST00000603717 POTEFA5A3E0 1075 aa14.22□□□□□ -0.13
AC008555.3-201ENST00000603717 MMRN1Q13201 1228 aa14.2□□□□□ -0.14
AC008555.3-201ENST00000603717 ATN1P54259 1190 aaPredicted RBP14.14□□□□□ -0.15
AC008555.3-201ENST00000603717 SPNS2Q8IVW8 549 aa14.11□□□□□ -0.15
AC008555.3-201ENST00000603717 MNX1P50219 401 aaPredicted RBP14.09□□□□□ -0.15
AC008555.3-201ENST00000603717 ST18O60284 1047 aa14.02□□□□□ -0.17
AC008555.3-201ENST00000603717 STAG3Q9UJ98 1225 aa14.01□□□□□ -0.17
AC008555.3-201ENST00000603717 NPM1P06748 294 aaKnown RBP eCLIP13.98□□□□□ -0.17
AC008555.3-201ENST00000603717 BMP2KQ9NSY1 1161 aaPredicted RBP13.95□□□□□ -0.18
AC008555.3-201ENST00000603717 COLQQ9Y215 455 aaPredicted RBP13.94□□□□□ -0.18
AC008555.3-201ENST00000603717 TRPC6Q9Y210 931 aa13.91□□□□□ -0.18
AC008555.3-201ENST00000603717 CCDC61Q9Y6R9 512 aa13.84□□□□□ -0.19
AC008555.3-201ENST00000603717 KIF12Q96FN5 646 aa13.82□□□□□ -0.2
AC008555.3-201ENST00000603717 SLAIN1Q8ND83 568 aa13.8□□□□□ -0.2
AC008555.3-201ENST00000603717 TIE1P35590 1138 aa13.78□□□□□ -0.2
AC008555.3-201ENST00000603717 SEC24BO95487 1268 aa13.76□□□□□ -0.21
AC008555.3-201ENST00000603717 TSPYL2Q9H2G4 693 aaPredicted RBP13.76□□□□□ -0.21
AC008555.3-201ENST00000603717 TTLL13PA6NNM8 815 aa13.71□□□□□ -0.21
AC008555.3-201ENST00000603717 TMEM121BQ9BXQ6 578 aaPredicted RBP13.71□□□□□ -0.21
AC008555.3-201ENST00000603717 MAP3K13O43283 966 aa13.66□□□□□ -0.22
AC008555.3-201ENST00000603717 IER5LQ5T953 404 aa13.65□□□□□ -0.22
AC008555.3-201ENST00000603717 MARVELD3Q96A59 401 aa13.65□□□□□ -0.22
AC008555.3-201ENST00000603717 KRTAP3-3Q9BYR6 98 aa13.59□□□□□ -0.23
AC008555.3-201ENST00000603717 KRTAP3-2Q9BYR7 98 aa13.59□□□□□ -0.23
AC008555.3-201ENST00000603717 TRIM35Q9UPQ4 493 aa13.59□□□□□ -0.23
AC008555.3-201ENST00000603717 POTEB3A0JP26 581 aa13.5□□□□□ -0.25
AC008555.3-201ENST00000603717 SPDYE4A6NLX3 237 aa13.5□□□□□ -0.25
AC008555.3-201ENST00000603717 POTEBQ6S5H4 581 aa13.5□□□□□ -0.25
AC008555.3-201ENST00000603717 SNPHO15079 494 aa13.45□□□□□ -0.26
AC008555.3-201ENST00000603717 PLCG2P16885 1265 aa13.4□□□□□ -0.26
AC008555.3-201ENST00000603717 IRX5P78411 483 aaPredicted RBP13.4□□□□□ -0.26
AC008555.3-201ENST00000603717 EMP3P54852 163 aa13.39□□□□□ -0.27
AC008555.3-201ENST00000603717 HS3ST6Q96QI5 342 aa13.39□□□□□ -0.27
AC008555.3-201ENST00000603717 RASEFQ8IZ41 740 aa13.38□□□□□ -0.27
AC008555.3-201ENST00000603717 SGIP1Q9BQI5 828 aa13.34□□□□□ -0.27
AC008555.3-201ENST00000603717 PCDHB13Q9Y5F0 798 aa13.31□□□□□ -0.28
AC008555.3-201ENST00000603717 FAM205CA6NFA0 338 aa13.3□□□□□ -0.28
AC008555.3-201ENST00000603717 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.3□□□□□ -0.28
AC008555.3-201ENST00000603717 TMEM106CQ9BVX2 250 aa13.27□□□□□ -0.29
AC008555.3-201ENST00000603717 IFNL1Q8IU54 200 aa13.26□□□□□ -0.29
AC008555.3-201ENST00000603717 OCEL1Q9H607 264 aa13.23□□□□□ -0.29
AC008555.3-201ENST00000603717 RNF166Q96A37 237 aaPredicted RBP13.2□□□□□ -0.3
AC008555.3-201ENST00000603717 PROM2Q8N271 834 aa13.11□□□□□ -0.31
AC008555.3-201ENST00000603717 PDCD7Q8N8D1 485 aaKnown RBP13.03□□□□□ -0.32
AC008555.3-201ENST00000603717 MYT1LQ9UL68 1186 aa13.02□□□□□ -0.33
AC008555.3-201ENST00000603717 C3orf67Q6ZVT6 689 aa13.01□□□□□ -0.33
AC008555.3-201ENST00000603717 NUBP1P53384 320 aa12.97□□□□□ -0.33
AC008555.3-201ENST00000603717 MIER1Q8N108 512 aa12.95□□□□□ -0.34
AC008555.3-201ENST00000603717 PLEKHG5O94827 1062 aa12.94□□□□□ -0.34
AC008555.3-201ENST00000603717 HOXB3P14651 431 aaPredicted RBP12.94□□□□□ -0.34
AC008555.3-201ENST00000603717 HOXB1P14653 301 aaPredicted RBP12.9□□□□□ -0.34
AC008555.3-201ENST00000603717 L3MBTL3Q96JM7 780 aaPredicted RBP12.88□□□□□ -0.35
AC008555.3-201ENST00000603717 ERBB3P21860 1342 aa12.86□□□□□ -0.35
AC008555.3-201ENST00000603717 FAM212AQ96EL1 285 aa12.78□□□□□ -0.36
AC008555.3-201ENST00000603717 PCDHB8Q9UN66 801 aa12.78□□□□□ -0.36
AC008555.3-201ENST00000603717 VARS2Q5ST30 1063 aaKnown RBP12.77□□□□□ -0.37
AC008555.3-201ENST00000603717 CSRNP3Q8WYN3 585 aa12.77□□□□□ -0.37
AC008555.3-201ENST00000603717 PTGER2P43116 358 aa12.76□□□□□ -0.37
AC008555.3-201ENST00000603717 ZNF687Q8N1G0 1237 aa12.72□□□□□ -0.37
AC008555.3-201ENST00000603717 ZNF710Q8N1W2 664 aa12.72□□□□□ -0.37
AC008555.3-201ENST00000603717 PYGBP11216 843 aa12.7□□□□□ -0.38
AC008555.3-201ENST00000603717 ILDR1Q86SU0 546 aaPredicted RBP12.7□□□□□ -0.38
AC008555.3-201ENST00000603717 PLCD3Q8N3E9 789 aa12.69□□□□□ -0.38
AC008555.3-201ENST00000603717 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.68□□□□□ -0.38
AC008555.3-201ENST00000603717 PLA2G2EQ9NZK7 142 aa12.68□□□□□ -0.38
AC008555.3-201ENST00000603717 MKRN3Q13064 507 aaKnown RBP12.66□□□□□ -0.38
AC008555.3-201ENST00000603717 DOK7Q18PE1 504 aa12.65□□□□□ -0.38
AC008555.3-201ENST00000603717 DPY19L2Q6NUT2 758 aa12.65□□□□□ -0.38
AC008555.3-201ENST00000603717 ZBTB47Q9UFB7 747 aaPredicted RBP12.65□□□□□ -0.38
AC008555.3-201ENST00000603717 GOLGA2Q08379 1002 aa12.58□□□□□ -0.4
AC008555.3-201ENST00000603717 ANKRD13DQ6ZTN6 518 aa12.56□□□□□ -0.4
AC008555.3-201ENST00000603717 NISCHQ9Y2I1 1504 aa12.56□□□□□ -0.4
AC008555.3-201ENST00000603717 BOLA1Q9Y3E2 137 aa12.55□□□□□ -0.4
AC008555.3-201ENST00000603717 RIMBP2O15034 1052 aa12.51□□□□□ -0.41
AC008555.3-201ENST00000603717 DCAF8Q5TAQ9 597 aa12.51□□□□□ -0.41
AC008555.3-201ENST00000603717 GPR153Q6NV75 609 aa12.49□□□□□ -0.41
AC008555.3-201ENST00000603717 ZSWIM6Q9HCJ5 1215 aa12.48□□□□□ -0.41
AC008555.3-201ENST00000603717 LSM11P83369 360 aaKnown RBP eCLIP12.47□□□□□ -0.41
AC008555.3-201ENST00000603717 ZNF467Q7Z7K2 595 aaPredicted RBP12.44□□□□□ -0.42
AC008555.3-201ENST00000603717 HCSTQ9UBK5 93 aa12.43□□□□□ -0.42
AC008555.3-201ENST00000603717 PSEN1P49768 467 aa12.41□□□□□ -0.42
AC008555.3-201ENST00000603717 G3V3G9 751 aa12.4□□□□□ -0.42
AC008555.3-201ENST00000603717 TMEM92Q6UXU6 159 aa12.37□□□□□ -0.43
AC008555.3-201ENST00000603717 POTEEQ6S8J3 1075 aa12.31□□□□□ -0.44
AC008555.3-201ENST00000603717 ZNF316A6NFI3 1004 aaPredicted RBP12.3□□□□□ -0.44
AC008555.3-201ENST00000603717 ARSIQ5FYB1 569 aa12.29□□□□□ -0.44
AC008555.3-201ENST00000603717 IRX2Q9BZI1 471 aaPredicted RBP12.28□□□□□ -0.44
AC008555.3-201ENST00000603717 CABP2Q9NPB3 220 aa12.27□□□□□ -0.45
AC008555.3-201ENST00000603717 CHRM1P11229 460 aaPredicted RBP12.26□□□□□ -0.45
AC008555.3-201ENST00000603717 KHSRPQ92945 711 aaKnown RBP eCLIP12.25□□□□□ -0.45
AC008555.3-201ENST00000603717 EHMT2Q96KQ7 1210 aa12.23□□□□□ -0.45
AC008555.3-201ENST00000603717 RGS20O76081 388 aa12.22□□□□□ -0.45
AC008555.3-201ENST00000603717 PBX2P40425 430 aa12.21□□□□□ -0.45
AC008555.3-201ENST00000603717 PDAP1Q13442 181 aaKnown RBP12.21□□□□□ -0.45
AC008555.3-201ENST00000603717 AXIN2Q9Y2T1 843 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms