RNA–Protein interactions for RNA: ENST00000603610.1

FOCAD-206, Transcript of focadhesin, humanhuman

TSL 3

Gene FOCAD, Length 214 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-206ENST00000603610 LMOD2Q6P5Q4 547 aa7.8□□□□□ -1.16
FOCAD-206ENST00000603610 NKX1-1Q15270 411 aaPredicted RBP7.78□□□□□ -1.16
FOCAD-206ENST00000603610 GSE1Q14687 1217 aa7.77□□□□□ -1.17
FOCAD-206ENST00000603610 ZNF692Q9BU19 519 aaPredicted RBP7.76□□□□□ -1.17
FOCAD-206ENST00000603610 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.75□□□□□ -1.17
FOCAD-206ENST00000603610 RNF25Q96BH1 459 aaPredicted RBP7.75□□□□□ -1.17
FOCAD-206ENST00000603610 RIOK3O14730 519 aaKnown RBP7.74□□□□□ -1.17
FOCAD-206ENST00000603610 NEUROD2Q15784 382 aa7.74□□□□□ -1.17
FOCAD-206ENST00000603610 STK25O00506 426 aa7.72□□□□□ -1.17
FOCAD-206ENST00000603610 WDR70Q9NW82 654 aa7.71□□□□□ -1.18
FOCAD-206ENST00000603610 SPDYE2BA6NHP3 402 aa7.7□□□□□ -1.18
FOCAD-206ENST00000603610 VGFO15240 615 aaPredicted RBP7.7□□□□□ -1.18
FOCAD-206ENST00000603610 SPDYE6P0CI01 402 aa7.7□□□□□ -1.18
FOCAD-206ENST00000603610 SPDYE2Q495Y8 402 aa7.7□□□□□ -1.18
FOCAD-206ENST00000603610 NPM2Q86SE8 214 aaKnown RBP7.7□□□□□ -1.18
FOCAD-206ENST00000603610 SSUH2Q9Y2M2 353 aa7.69□□□□□ -1.18
FOCAD-206ENST00000603610 UBTFP17480 764 aaKnown RBP7.68□□□□□ -1.18
FOCAD-206ENST00000603610 SPINK5Q9NQ38 1064 aaPredicted RBP7.68□□□□□ -1.18
FOCAD-206ENST00000603610 CAPN15O75808 1086 aa7.67□□□□□ -1.18
FOCAD-206ENST00000603610 PABPN1Q86U42 306 aaKnown RBP eCLIP7.67□□□□□ -1.18
FOCAD-206ENST00000603610 KCNV2Q8TDN2 545 aa7.67□□□□□ -1.18
FOCAD-206ENST00000603610 TRIM26Q12899 539 aaPredicted RBP7.65□□□□□ -1.18
FOCAD-206ENST00000603610 ZC3H15Q8WU90 426 aaKnown RBP7.64□□□□□ -1.19
FOCAD-206ENST00000603610 RSPH6AQ9H0K4 717 aa7.64□□□□□ -1.19
FOCAD-206ENST00000603610 SGIP1Q9BQI5 828 aa7.63□□□□□ -1.19
FOCAD-206ENST00000603610 ZMYND15Q9H091 742 aa7.61□□□□□ -1.19
FOCAD-206ENST00000603610 SLC24A3Q9HC58 644 aa7.61□□□□□ -1.19
FOCAD-206ENST00000603610 STK24Q9Y6E0 443 aa7.61□□□□□ -1.19
FOCAD-206ENST00000603610 BCL11BQ9C0K0 894 aaPredicted RBP7.6□□□□□ -1.19
FOCAD-206ENST00000603610 DCAF8Q5TAQ9 597 aa7.59□□□□□ -1.19
FOCAD-206ENST00000603610 OSCARQ8IYS5 282 aa7.57□□□□□ -1.2
FOCAD-206ENST00000603610 ARHGEF1Q92888 912 aaKnown RBP7.57□□□□□ -1.2
FOCAD-206ENST00000603610 FAM212AQ96EL1 285 aa7.57□□□□□ -1.2
FOCAD-206ENST00000603610 NUBP1P53384 320 aa7.56□□□□□ -1.2
FOCAD-206ENST00000603610 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.55□□□□□ -1.2
FOCAD-206ENST00000603610 ABCB7O75027 752 aa7.55□□□□□ -1.2
FOCAD-206ENST00000603610 CHRM1P11229 460 aaPredicted RBP7.55□□□□□ -1.2
FOCAD-206ENST00000603610 ZFP91Q96JP5 570 aaPredicted RBP7.55□□□□□ -1.2
FOCAD-206ENST00000603610 HRCP23327 699 aa7.53□□□□□ -1.2
FOCAD-206ENST00000603610 SMYD5Q6GMV2 418 aa7.52□□□□□ -1.21
FOCAD-206ENST00000603610 CCDC9Q9Y3X0 531 aaKnown RBP7.52□□□□□ -1.21
FOCAD-206ENST00000603610 ZBTB7CA1YPR0 619 aa7.51□□□□□ -1.21
FOCAD-206ENST00000603610 TESPA1A2RU30 521 aaPredicted RBP7.51□□□□□ -1.21
FOCAD-206ENST00000603610 ZMYND10O75800 440 aa7.51□□□□□ -1.21
FOCAD-206ENST00000603610 CADPS2Q86UW7 1296 aa7.49□□□□□ -1.21
FOCAD-206ENST00000603610 ARID3AQ99856 593 aa7.49□□□□□ -1.21
FOCAD-206ENST00000603610 E2F4Q16254 413 aa7.47□□□□□ -1.21
FOCAD-206ENST00000603610 PDIA4P13667 645 aaKnown RBP7.46□□□□□ -1.22
FOCAD-206ENST00000603610 SEMA3EO15041 775 aa7.45□□□□□ -1.22
FOCAD-206ENST00000603610 BARGINQ6ZT62 677 aa7.45□□□□□ -1.22
FOCAD-206ENST00000603610 AK7Q96M32 723 aa7.45□□□□□ -1.22
FOCAD-206ENST00000603610 C1QBPQ07021 282 aaKnown RBP7.42□□□□□ -1.22
FOCAD-206ENST00000603610 RNF39Q9H2S5 420 aa7.42□□□□□ -1.22
FOCAD-206ENST00000603610 IL27Q8NEV9 243 aa7.41□□□□□ -1.22
FOCAD-206ENST00000603610 GPBP1L1Q9HC44 474 aaPredicted RBP7.41□□□□□ -1.22
FOCAD-206ENST00000603610 FLIIQ13045 1269 aa7.39□□□□□ -1.23
FOCAD-206ENST00000603610 KDM4CQ9H3R0 1056 aa7.39□□□□□ -1.23
FOCAD-206ENST00000603610 C1orf115Q9H7X2 142 aa7.39□□□□□ -1.23
FOCAD-206ENST00000603610 APBB1O00213 710 aa7.38□□□□□ -1.23
FOCAD-206ENST00000603610 PYGBP11216 843 aa7.37□□□□□ -1.23
FOCAD-206ENST00000603610 KRI1Q8N9T8 703 aaKnown RBP7.37□□□□□ -1.23
FOCAD-206ENST00000603610 ZNF467Q7Z7K2 595 aaPredicted RBP7.36□□□□□ -1.23
FOCAD-206ENST00000603610 GPIHBP1Q8IV16 184 aa7.35□□□□□ -1.23
FOCAD-206ENST00000603610 ARID3CA6NKF2 412 aa7.34□□□□□ -1.23
FOCAD-206ENST00000603610 MKRN3Q13064 507 aaKnown RBP7.34□□□□□ -1.23
FOCAD-206ENST00000603610 RASEFQ8IZ41 740 aa7.34□□□□□ -1.23
FOCAD-206ENST00000603610 DSG3P32926 999 aa7.33□□□□□ -1.24
FOCAD-206ENST00000603610 PDE4DQ08499 809 aa7.33□□□□□ -1.24
FOCAD-206ENST00000603610 ARIH1Q9Y4X5 557 aaPredicted RBP7.33□□□□□ -1.24
FOCAD-206ENST00000603610 PDAP1Q13442 181 aaKnown RBP7.32□□□□□ -1.24
FOCAD-206ENST00000603610 MFRPQ9BY79 579 aa7.31□□□□□ -1.24
FOCAD-206ENST00000603610 TRIM66O15016 1216 aa7.3□□□□□ -1.24
FOCAD-206ENST00000603610 DDRGK1Q96HY6 314 aa7.3□□□□□ -1.24
FOCAD-206ENST00000603610 MNX1P50219 401 aaPredicted RBP7.29□□□□□ -1.24
FOCAD-206ENST00000603610 SPDYE1Q8NFV5 336 aaPredicted RBP7.29□□□□□ -1.24
FOCAD-206ENST00000603610 CREBZFQ9NS37 354 aa7.29□□□□□ -1.24
FOCAD-206ENST00000603610 ZNF316A6NFI3 1004 aaPredicted RBP7.28□□□□□ -1.24
FOCAD-206ENST00000603610 CCDC82Q8N4S0 544 aa7.28□□□□□ -1.24
FOCAD-206ENST00000603610 KCTD17Q8N5Z5 321 aa7.28□□□□□ -1.24
FOCAD-206ENST00000603610 NECTIN2Q92692 538 aa7.28□□□□□ -1.24
FOCAD-206ENST00000603610 A6NJR5 290 aa7.27□□□□□ -1.25
FOCAD-206ENST00000603610 PDE4AP27815 886 aa7.26□□□□□ -1.25
FOCAD-206ENST00000603610 NLRP6P59044 892 aa7.26□□□□□ -1.25
FOCAD-206ENST00000603610 MFSD10Q14728 455 aa7.25□□□□□ -1.25
FOCAD-206ENST00000603610 TRAIPQ9BWF2 469 aa7.25□□□□□ -1.25
FOCAD-206ENST00000603610 PRR29P0C7W0 189 aa7.24□□□□□ -1.25
FOCAD-206ENST00000603610 RBM26Q5T8P6 1007 aaKnown RBP7.24□□□□□ -1.25
FOCAD-206ENST00000603610 TRAK2O60296 914 aa7.23□□□□□ -1.25
FOCAD-206ENST00000603610 LARP6Q9BRS8 491 aaKnown RBP7.23□□□□□ -1.25
FOCAD-206ENST00000603610 FAM117AQ9C073 453 aa7.23□□□□□ -1.25
FOCAD-206ENST00000603610 PPP1R37O75864 691 aa7.22□□□□□ -1.25
FOCAD-206ENST00000603610 DDX27Q96GQ7 796 aaKnown RBP7.22□□□□□ -1.25
FOCAD-206ENST00000603610 GOPCQ9HD26 462 aa7.22□□□□□ -1.25
FOCAD-206ENST00000603610 NCKAP5LQ9HCH0 1330 aa7.22□□□□□ -1.25
FOCAD-206ENST00000603610 SOX12O15370 315 aa7.21□□□□□ -1.26
FOCAD-206ENST00000603610 RAD21O60216 631 aa7.2□□□□□ -1.26
FOCAD-206ENST00000603610 ONECUT3O60422 494 aaPredicted RBP7.2□□□□□ -1.26
FOCAD-206ENST00000603610 PSEN1P49768 467 aa7.2□□□□□ -1.26
FOCAD-206ENST00000603610 CAMK2BQ13554 666 aa7.2□□□□□ -1.26
FOCAD-206ENST00000603610 FBXO22Q8NEZ5 403 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms