RNA–Protein interactions for RNA: ENST00000602632.1

UBE2E3-208, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2 BASIC

Gene UBE2E3, Length 446 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-208ENST00000602632 LCE2DQ5TA82 110 aaPredicted RBP14.93□□□□□ -0.02
UBE2E3-208ENST00000602632 NPM1P06748 294 aaKnown RBP eCLIP14.92□□□□□ -0.02
UBE2E3-208ENST00000602632 FAM163AQ96GL9 167 aaPredicted RBP14.92□□□□□ -0.02
UBE2E3-208ENST00000602632 POTEJP0CG39 1038 aa14.89□□□□□ -0.03
UBE2E3-208ENST00000602632 ATMINO43313 823 aaPredicted RBP14.88□□□□□ -0.03
UBE2E3-208ENST00000602632 MS4A3Q96HJ5 214 aa14.79□□□□□ -0.04
UBE2E3-208ENST00000602632 NISCHQ9Y2I1 1504 aa14.78□□□□□ -0.04
UBE2E3-208ENST00000602632 CDAN1Q8IWY9 1227 aa14.74□□□□□ -0.05
UBE2E3-208ENST00000602632 MNX1P50219 401 aaPredicted RBP14.66□□□□□ -0.06
UBE2E3-208ENST00000602632 ATN1P54259 1190 aaPredicted RBP14.63□□□□□ -0.07
UBE2E3-208ENST00000602632 POTEFA5A3E0 1075 aa14.52□□□□□ -0.09
UBE2E3-208ENST00000602632 TIE1P35590 1138 aa14.49□□□□□ -0.09
UBE2E3-208ENST00000602632 BMP2KQ9NSY1 1161 aaPredicted RBP14.49□□□□□ -0.09
UBE2E3-208ENST00000602632 SEC24BO95487 1268 aa14.47□□□□□ -0.09
UBE2E3-208ENST00000602632 MMRN1Q13201 1228 aa14.47□□□□□ -0.09
UBE2E3-208ENST00000602632 CCDC61Q9Y6R9 512 aa14.47□□□□□ -0.09
UBE2E3-208ENST00000602632 SPDYE4A6NLX3 237 aa14.44□□□□□ -0.1
UBE2E3-208ENST00000602632 KIF12Q96FN5 646 aa14.44□□□□□ -0.1
UBE2E3-208ENST00000602632 TSPYL2Q9H2G4 693 aaPredicted RBP14.44□□□□□ -0.1
UBE2E3-208ENST00000602632 ST18O60284 1047 aa14.4□□□□□ -0.1
UBE2E3-208ENST00000602632 IER5LQ5T953 404 aa14.4□□□□□ -0.1
UBE2E3-208ENST00000602632 SPNS2Q8IVW8 549 aa14.39□□□□□ -0.11
UBE2E3-208ENST00000602632 TMEM121BQ9BXQ6 578 aaPredicted RBP14.36□□□□□ -0.11
UBE2E3-208ENST00000602632 COLQQ9Y215 455 aaPredicted RBP14.35□□□□□ -0.11
UBE2E3-208ENST00000602632 SLAIN1Q8ND83 568 aa14.34□□□□□ -0.11
UBE2E3-208ENST00000602632 TTLL13PA6NNM8 815 aa14.3□□□□□ -0.12
UBE2E3-208ENST00000602632 TRPC6Q9Y210 931 aa14.29□□□□□ -0.12
UBE2E3-208ENST00000602632 MAP3K13O43283 966 aa14.26□□□□□ -0.13
UBE2E3-208ENST00000602632 SNPHO15079 494 aa14.22□□□□□ -0.13
UBE2E3-208ENST00000602632 TRIM35Q9UPQ4 493 aa14.22□□□□□ -0.13
UBE2E3-208ENST00000602632 SGIP1Q9BQI5 828 aa14.21□□□□□ -0.13
UBE2E3-208ENST00000602632 PLEKHG5O94827 1062 aa14.15□□□□□ -0.14
UBE2E3-208ENST00000602632 PLCG2P16885 1265 aa14.13□□□□□ -0.15
UBE2E3-208ENST00000602632 PCDHB13Q9Y5F0 798 aa14.05□□□□□ -0.16
UBE2E3-208ENST00000602632 RASEFQ8IZ41 740 aa14.03□□□□□ -0.16
UBE2E3-208ENST00000602632 MARVELD3Q96A59 401 aa14□□□□□ -0.17
UBE2E3-208ENST00000602632 EIF2AK3Q9NZJ5 1116 aaKnown RBP14□□□□□ -0.17
UBE2E3-208ENST00000602632 IRX5P78411 483 aaPredicted RBP13.98□□□□□ -0.17
UBE2E3-208ENST00000602632 PROM2Q8N271 834 aa13.96□□□□□ -0.17
UBE2E3-208ENST00000602632 TMEM106CQ9BVX2 250 aa13.95□□□□□ -0.18
UBE2E3-208ENST00000602632 EMP3P54852 163 aa13.93□□□□□ -0.18
UBE2E3-208ENST00000602632 OCEL1Q9H607 264 aa13.93□□□□□ -0.18
UBE2E3-208ENST00000602632 MIER1Q8N108 512 aa13.89□□□□□ -0.19
UBE2E3-208ENST00000602632 IFNL1Q8IU54 200 aa13.88□□□□□ -0.19
UBE2E3-208ENST00000602632 KRTAP3-3Q9BYR6 98 aa13.87□□□□□ -0.19
UBE2E3-208ENST00000602632 KRTAP3-2Q9BYR7 98 aa13.87□□□□□ -0.19
UBE2E3-208ENST00000602632 HS3ST6Q96QI5 342 aa13.83□□□□□ -0.2
UBE2E3-208ENST00000602632 ZBTB47Q9UFB7 747 aaPredicted RBP13.83□□□□□ -0.2
UBE2E3-208ENST00000602632 CSRNP3Q8WYN3 585 aa13.82□□□□□ -0.2
UBE2E3-208ENST00000602632 C3orf67Q6ZVT6 689 aa13.77□□□□□ -0.21
UBE2E3-208ENST00000602632 FAM205CA6NFA0 338 aa13.76□□□□□ -0.21
UBE2E3-208ENST00000602632 FAM212AQ96EL1 285 aa13.75□□□□□ -0.21
UBE2E3-208ENST00000602632 NUBP1P53384 320 aa13.7□□□□□ -0.22
UBE2E3-208ENST00000602632 L3MBTL3Q96JM7 780 aaPredicted RBP13.7□□□□□ -0.22
UBE2E3-208ENST00000602632 POTEB3A0JP26 581 aa13.69□□□□□ -0.22
UBE2E3-208ENST00000602632 POTEBQ6S5H4 581 aa13.69□□□□□ -0.22
UBE2E3-208ENST00000602632 PLCD3Q8N3E9 789 aa13.69□□□□□ -0.22
UBE2E3-208ENST00000602632 RNF166Q96A37 237 aaPredicted RBP13.67□□□□□ -0.22
UBE2E3-208ENST00000602632 PDCD7Q8N8D1 485 aaKnown RBP13.59□□□□□ -0.23
UBE2E3-208ENST00000602632 GOLGA2Q08379 1002 aa13.53□□□□□ -0.24
UBE2E3-208ENST00000602632 MYT1LQ9UL68 1186 aa13.53□□□□□ -0.24
UBE2E3-208ENST00000602632 MKRN3Q13064 507 aaKnown RBP13.51□□□□□ -0.25
UBE2E3-208ENST00000602632 PTGER2P43116 358 aa13.5□□□□□ -0.25
UBE2E3-208ENST00000602632 HOXB1P14653 301 aaPredicted RBP13.48□□□□□ -0.25
UBE2E3-208ENST00000602632 ABCC9O60706 1549 aa13.48□□□□□ -0.25
UBE2E3-208ENST00000602632 ERBB3P21860 1342 aa13.46□□□□□ -0.25
UBE2E3-208ENST00000602632 ZNF710Q8N1W2 664 aa13.45□□□□□ -0.26
UBE2E3-208ENST00000602632 PYGBP11216 843 aa13.42□□□□□ -0.26
UBE2E3-208ENST00000602632 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.42□□□□□ -0.26
UBE2E3-208ENST00000602632 PCDHB8Q9UN66 801 aa13.42□□□□□ -0.26
UBE2E3-208ENST00000602632 DOK7Q18PE1 504 aa13.41□□□□□ -0.26
UBE2E3-208ENST00000602632 HOXB3P14651 431 aaPredicted RBP13.4□□□□□ -0.26
UBE2E3-208ENST00000602632 ZNF467Q7Z7K2 595 aaPredicted RBP13.39□□□□□ -0.27
UBE2E3-208ENST00000602632 DCAF8Q5TAQ9 597 aa13.38□□□□□ -0.27
UBE2E3-208ENST00000602632 G3V3G9 751 aa13.37□□□□□ -0.27
UBE2E3-208ENST00000602632 RIMBP2O15034 1052 aa13.37□□□□□ -0.27
UBE2E3-208ENST00000602632 CCDC180Q9P1Z9 1646 aa13.37□□□□□ -0.27
UBE2E3-208ENST00000602632 ILDR1Q86SU0 546 aaPredicted RBP13.33□□□□□ -0.28
UBE2E3-208ENST00000602632 VARS2Q5ST30 1063 aaKnown RBP13.3□□□□□ -0.28
UBE2E3-208ENST00000602632 ZNF687Q8N1G0 1237 aa13.29□□□□□ -0.28
UBE2E3-208ENST00000602632 BOLA1Q9Y3E2 137 aa13.27□□□□□ -0.29
UBE2E3-208ENST00000602632 ZSWIM6Q9HCJ5 1215 aa13.25□□□□□ -0.29
UBE2E3-208ENST00000602632 PSEN1P49768 467 aa13.19□□□□□ -0.3
UBE2E3-208ENST00000602632 GSE1Q14687 1217 aa13.18□□□□□ -0.3
UBE2E3-208ENST00000602632 CHRM1P11229 460 aaPredicted RBP13.16□□□□□ -0.3
UBE2E3-208ENST00000602632 DPY19L2Q6NUT2 758 aa13.14□□□□□ -0.31
UBE2E3-208ENST00000602632 PLA2G2EQ9NZK7 142 aa13.13□□□□□ -0.31
UBE2E3-208ENST00000602632 PDAP1Q13442 181 aaKnown RBP13.1□□□□□ -0.31
UBE2E3-208ENST00000602632 EHMT2Q96KQ7 1210 aa13.09□□□□□ -0.31
UBE2E3-208ENST00000602632 ANKRD13DQ6ZTN6 518 aa13.08□□□□□ -0.32
UBE2E3-208ENST00000602632 LSM11P83369 360 aaKnown RBP eCLIP13.03□□□□□ -0.32
UBE2E3-208ENST00000602632 GPR153Q6NV75 609 aa13.03□□□□□ -0.32
UBE2E3-208ENST00000602632 HCSTQ9UBK5 93 aa13.03□□□□□ -0.32
UBE2E3-208ENST00000602632 CABP2Q9NPB3 220 aa13.02□□□□□ -0.33
UBE2E3-208ENST00000602632 PBX2P40425 430 aa12.96□□□□□ -0.33
UBE2E3-208ENST00000602632 ZNF316A6NFI3 1004 aaPredicted RBP12.91□□□□□ -0.34
UBE2E3-208ENST00000602632 FBXO3Q9UK99 471 aa12.91□□□□□ -0.34
UBE2E3-208ENST00000602632 RGS20O76081 388 aa12.86□□□□□ -0.35
UBE2E3-208ENST00000602632 MICALL2Q8IY33 904 aa12.86□□□□□ -0.35
UBE2E3-208ENST00000602632 ARSIQ5FYB1 569 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms