RNA–Protein interactions for RNA: ENST00000601973.1

ZC3H4-205, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS ALT2 TSL 5

Gene ZC3H4, Length 4,895 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-205ENST00000601973 CHGAP10645 457 aaKnown RBP19.95■□□□□ 0.78
ZC3H4-205ENST00000601973 CLIP1P30622 1438 aa19.95■□□□□ 0.78
ZC3H4-205ENST00000601973 TRIM44Q96DX7 344 aaPredicted RBP19.93■□□□□ 0.78
ZC3H4-205ENST00000601973 GOLGA6L22H0YM25 854 aa19.92■□□□□ 0.78
ZC3H4-205ENST00000601973 NCLP19338 710 aaKnown RBP19.92■□□□□ 0.78
ZC3H4-205ENST00000601973 SALL2Q9Y467 1007 aaPredicted RBP19.91■□□□□ 0.78
ZC3H4-205ENST00000601973 TNNT2P45379 298 aaPredicted RBP19.9■□□□□ 0.78
ZC3H4-205ENST00000601973 ARXQ96QS3 562 aa19.88■□□□□ 0.77
ZC3H4-205ENST00000601973 GOLGA3Q08378 1498 aa19.88■□□□□ 0.77
ZC3H4-205ENST00000601973 CEP162Q5TB80 1403 aa19.86■□□□□ 0.77
ZC3H4-205ENST00000601973 KIF27Q86VH2 1401 aa19.81■□□□□ 0.76
ZC3H4-205ENST00000601973 CHMP7Q8WUX9 453 aaPredicted RBP19.81■□□□□ 0.76
ZC3H4-205ENST00000601973 ERICH6BQ5W0A0 696 aa19.8■□□□□ 0.76
ZC3H4-205ENST00000601973 CCDC88BA6NC98 1476 aa19.8■□□□□ 0.76
ZC3H4-205ENST00000601973 TNIKQ9UKE5 1360 aa19.78■□□□□ 0.76
ZC3H4-205ENST00000601973 NPM1P06748 294 aaKnown RBP eCLIP19.78■□□□□ 0.76
ZC3H4-205ENST00000601973 TSPY4P0CV99 314 aa19.78■□□□□ 0.76
ZC3H4-205ENST00000601973 TSPY10P0CW01 314 aa19.78■□□□□ 0.76
ZC3H4-205ENST00000601973 PPM1GO15355 546 aaPredicted RBP19.77■□□□□ 0.76
ZC3H4-205ENST00000601973 EIF4G2P78344 907 aaKnown RBP eCLIP19.75■□□□□ 0.75
ZC3H4-205ENST00000601973 CEP164Q9UPV0 1460 aa19.74■□□□□ 0.75
ZC3H4-205ENST00000601973 MTUS2Q5JR59 1369 aa19.73■□□□□ 0.75
ZC3H4-205ENST00000601973 ZRSR1Q15695 479 aaKnown RBP19.73■□□□□ 0.75
ZC3H4-205ENST00000601973 SOGA1O94964 1423 aa19.71■□□□□ 0.75
ZC3H4-205ENST00000601973 PTMAP06454 111 aaKnown RBP19.7■□□□□ 0.74
ZC3H4-205ENST00000601973 CHIC2Q9UKJ5 165 aa19.69■□□□□ 0.74
ZC3H4-205ENST00000601973 SMARCA2P51531 1590 aa19.68■□□□□ 0.74
ZC3H4-205ENST00000601973 WIZO95785 1651 aa19.67■□□□□ 0.74
ZC3H4-205ENST00000601973 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.67■□□□□ 0.741e-6■■■□□ 15
ZC3H4-205ENST00000601973 SUPT16HQ9Y5B9 1047 aaKnown RBP19.66■□□□□ 0.74
ZC3H4-205ENST00000601973 IRX6P78412 446 aaPredicted RBP19.64■□□□□ 0.74
ZC3H4-205ENST00000601973 CASC1Q6TDU7 716 aa19.64■□□□□ 0.74
ZC3H4-205ENST00000601973 KDM2AQ9Y2K7 1162 aa19.64■□□□□ 0.73
ZC3H4-205ENST00000601973 DNTTIP2Q5QJE6 756 aaKnown RBP19.63■□□□□ 0.73
ZC3H4-205ENST00000601973 CFAP53Q96M91 514 aa19.62■□□□□ 0.73
ZC3H4-205ENST00000601973 ABCC8Q09428 1581 aa19.62■□□□□ 0.73
ZC3H4-205ENST00000601973 CDCA8Q53HL2 280 aa19.61■□□□□ 0.73
ZC3H4-205ENST00000601973 TOP2AP11388 1531 aaKnown RBP19.6■□□□□ 0.73
ZC3H4-205ENST00000601973 CUX2O14529 1486 aa19.56■□□□□ 0.72
ZC3H4-205ENST00000601973 CHMP4BQ9H444 224 aaKnown RBP19.56■□□□□ 0.72
ZC3H4-205ENST00000601973 NRDCO43847 1150 aa19.55■□□□□ 0.72
ZC3H4-205ENST00000601973 CARMIL1Q5VZK9 1371 aa19.54■□□□□ 0.72
ZC3H4-205ENST00000601973 ATAD2BQ9ULI0 1458 aa19.52■□□□□ 0.72
ZC3H4-205ENST00000601973 GOLGA6L6A8MZA4 724 aa19.51■□□□□ 0.71
ZC3H4-205ENST00000601973 ERCC6Q03468 1493 aa19.51■□□□□ 0.71
ZC3H4-205ENST00000601973 NAP1L5Q96NT1 182 aaPredicted RBP19.5■□□□□ 0.71
ZC3H4-205ENST00000601973 FTSJ3Q8IY81 847 aaKnown RBP19.5■□□□□ 0.71
ZC3H4-205ENST00000601973 PPP4R2Q9NY27 417 aa19.5■□□□□ 0.71
ZC3H4-205ENST00000601973 MS4A1P11836 297 aa19.48■□□□□ 0.71
ZC3H4-205ENST00000601973 SMARCA4P51532 1647 aa19.48■□□□□ 0.71
ZC3H4-205ENST00000601973 KNSTRNQ9Y448 316 aa19.48■□□□□ 0.71
ZC3H4-205ENST00000601973 RRP7BPQ9NSQ0 103 aa19.47■□□□□ 0.71
ZC3H4-205ENST00000601973 PLEKHD1A6NEE1 506 aa19.47■□□□□ 0.71
ZC3H4-205ENST00000601973 PLPPR3Q6T4P5 718 aa19.43■□□□□ 0.7
ZC3H4-205ENST00000601973 NOP58Q9Y2X3 529 aaKnown RBP19.43■□□□□ 0.7
ZC3H4-205ENST00000601973 PPP1R15AO75807 674 aaPredicted RBP19.42■□□□□ 0.7
ZC3H4-205ENST00000601973 HIRIP3Q9BW71 556 aaPredicted RBP19.42■□□□□ 0.7
ZC3H4-205ENST00000601973 NUDCQ9Y266 331 aa19.42■□□□□ 0.7
ZC3H4-205ENST00000601973 CADPSQ9ULU8 1353 aa19.41■□□□□ 0.7
ZC3H4-205ENST00000601973 MAPK8IP3Q9UPT6 1336 aa19.4■□□□□ 0.7
ZC3H4-205ENST00000601973 KCNH8Q96L42 1107 aa19.4■□□□□ 0.7
ZC3H4-205ENST00000601973 A0A0G2JS52 829 aa19.4■□□□□ 0.7
ZC3H4-205ENST00000601973 CHAF1AQ13111 956 aaPredicted RBP19.4■□□□□ 0.7
ZC3H4-205ENST00000601973 RBM19Q9Y4C8 960 aaKnown RBP19.4■□□□□ 0.7
ZC3H4-205ENST00000601973 PDS5BQ9NTI5 1447 aa19.39■□□□□ 0.69
ZC3H4-205ENST00000601973 L1TD1Q5T7N2 865 aaKnown RBP19.37■□□□□ 0.69
ZC3H4-205ENST00000601973 C14orf37Q86TY3 774 aa19.36■□□□□ 0.69
ZC3H4-205ENST00000601973 HSP90AB1P08238 724 aaKnown RBP19.36■□□□□ 0.69
ZC3H4-205ENST00000601973 TSHZ2Q9NRE2 1034 aa19.36■□□□□ 0.69
ZC3H4-205ENST00000601973 CFAP44Q96MT7 982 aa19.36■□□□□ 0.69
ZC3H4-205ENST00000601973 PLCB2Q00722 1185 aa19.35■□□□□ 0.69
ZC3H4-205ENST00000601973 FHAD1B1AJZ9 1412 aa19.35■□□□□ 0.69
ZC3H4-205ENST00000601973 DEKP35659 375 aaKnown RBP19.35■□□□□ 0.69
ZC3H4-205ENST00000601973 CFDP1Q9UEE9 299 aaPredicted RBP19.35■□□□□ 0.69
ZC3H4-205ENST00000601973 TDRD9Q8NDG6 1382 aaKnown RBP19.34■□□□□ 0.69
ZC3H4-205ENST00000601973 LAS1LQ9Y4W2 734 aaKnown RBP19.34■□□□□ 0.69
ZC3H4-205ENST00000601973 RGS3P49796 1198 aa19.33■□□□□ 0.68
ZC3H4-205ENST00000601973 VPS8Q8N3P4 1428 aa19.32■□□□□ 0.68
ZC3H4-205ENST00000601973 FGD1P98174 961 aa19.31■□□□□ 0.68
ZC3H4-205ENST00000601973 CARD11Q9BXL7 1154 aa19.31■□□□□ 0.68
ZC3H4-205ENST00000601973 RTN4Q9NQC3 1192 aaKnown RBP19.31■□□□□ 0.68
ZC3H4-205ENST00000601973 ZBTB7CA1YPR0 619 aa19.31■□□□□ 0.68
ZC3H4-205ENST00000601973 GOLGA6L4A6NEF3 574 aa19.31■□□□□ 0.68
ZC3H4-205ENST00000601973 PNNQ9H307 717 aaKnown RBP19.31■□□□□ 0.68
ZC3H4-205ENST00000601973 HSCBQ8IWL3 235 aa19.29■□□□□ 0.68
ZC3H4-205ENST00000601973 MSNP26038 577 aaKnown RBP19.29■□□□□ 0.68
ZC3H4-205ENST00000601973 RGL3Q3MIN7 710 aa19.28■□□□□ 0.68
ZC3H4-205ENST00000601973 EIF4G1Q04637 1599 aaKnown RBP19.27■□□□□ 0.68
ZC3H4-205ENST00000601973 CCNB3Q8WWL7 1395 aa19.27■□□□□ 0.68
ZC3H4-205ENST00000601973 KCNJ4P48050 445 aa19.26■□□□□ 0.67
ZC3H4-205ENST00000601973 HAP1P54257 671 aaPredicted RBP19.25■□□□□ 0.67
ZC3H4-205ENST00000601973 KANK4Q5T7N3 995 aaPredicted RBP19.24■□□□□ 0.67
ZC3H4-205ENST00000601973 FRAT1Q92837 279 aaPredicted RBP19.24■□□□□ 0.67
ZC3H4-205ENST00000601973 MCCP23508 829 aa19.23■□□□□ 0.67
ZC3H4-205ENST00000601973 NEUROD2Q15784 382 aa19.23■□□□□ 0.67
ZC3H4-205ENST00000601973 TPRNQ4KMQ1 711 aa19.23■□□□□ 0.67
ZC3H4-205ENST00000601973 PTMSP20962 102 aa19.23■□□□□ 0.67
ZC3H4-205ENST00000601973 OS9Q13438 667 aaPredicted RBP19.22■□□□□ 0.67
ZC3H4-205ENST00000601973 RUSC2Q8N2Y8 1516 aa19.2■□□□□ 0.66
ZC3H4-205ENST00000601973 TIMELESSQ9UNS1 1208 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms