RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 BBXQ8WY36 941 aaPredicted RBP7.89□□□□□ -1.15
LINC00649-204ENST00000593977 STAG3Q9UJ98 1225 aa7.88□□□□□ -1.15
LINC00649-204ENST00000593977 ECM2O94769 699 aaPredicted RBP7.87□□□□□ -1.15
LINC00649-204ENST00000593977 LHX8Q68G74 356 aa7.87□□□□□ -1.15
LINC00649-204ENST00000593977 MYO15BQ96JP2 1530 aa7.87□□□□□ -1.15
LINC00649-204ENST00000593977 REM2Q8IYK8 340 aaPredicted RBP7.86□□□□□ -1.15
LINC00649-204ENST00000593977 FXR2P51116 673 aaKnown RBP eCLIP7.85□□□□□ -1.15
LINC00649-204ENST00000593977 TULP1O00294 542 aaPredicted RBP7.84□□□□□ -1.15
LINC00649-204ENST00000593977 EVX2Q03828 476 aa7.84□□□□□ -1.15
LINC00649-204ENST00000593977 OSCARQ8IYS5 282 aa7.83□□□□□ -1.16
LINC00649-204ENST00000593977 ZNF692Q9BU19 519 aaPredicted RBP7.82□□□□□ -1.16
LINC00649-204ENST00000593977 PLCD3Q8N3E9 789 aa7.81□□□□□ -1.16
LINC00649-204ENST00000593977 SPDYE2BA6NHP3 402 aa7.8□□□□□ -1.16
LINC00649-204ENST00000593977 SPDYE6P0CI01 402 aa7.8□□□□□ -1.16
LINC00649-204ENST00000593977 SPDYE2Q495Y8 402 aa7.8□□□□□ -1.16
LINC00649-204ENST00000593977 PAXIP1Q6ZW49 1069 aaPredicted RBP7.8□□□□□ -1.16
LINC00649-204ENST00000593977 NPM1P06748 294 aaKnown RBP eCLIP7.78□□□□□ -1.16
LINC00649-204ENST00000593977 CFAP44Q96MT7 982 aa7.78□□□□□ -1.16
LINC00649-204ENST00000593977 KDM2AQ9Y2K7 1162 aa7.78□□□□□ -1.16
LINC00649-204ENST00000593977 SSUH2Q9Y2M2 353 aa7.78□□□□□ -1.16
LINC00649-204ENST00000593977 THOC2Q8NI27 1593 aaKnown RBP7.77□□□□□ -1.17
LINC00649-204ENST00000593977 PITPNM1O00562 1244 aa7.77□□□□□ -1.17
LINC00649-204ENST00000593977 MIER1Q8N108 512 aa7.76□□□□□ -1.17
LINC00649-204ENST00000593977 SPRYD3Q8NCJ5 442 aa7.76□□□□□ -1.17
LINC00649-204ENST00000593977 RGL2O15211 777 aa7.75□□□□□ -1.17
LINC00649-204ENST00000593977 ZBTB47Q9UFB7 747 aaPredicted RBP7.74□□□□□ -1.17
LINC00649-204ENST00000593977 RIMBP3CA6NJZ7 1639 aa7.74□□□□□ -1.17
LINC00649-204ENST00000593977 RIMBP3BA6NNM3 1639 aa7.74□□□□□ -1.17
LINC00649-204ENST00000593977 NESP48681 1621 aa7.74□□□□□ -1.17
LINC00649-204ENST00000593977 RIMBP3Q9UFD9 1639 aa7.74□□□□□ -1.17
LINC00649-204ENST00000593977 PLEKHG5O94827 1062 aa7.72□□□□□ -1.17
LINC00649-204ENST00000593977 SCRIBQ14160 1630 aa7.71□□□□□ -1.17
LINC00649-204ENST00000593977 GTF3C3Q9Y5Q9 886 aa7.7□□□□□ -1.18
LINC00649-204ENST00000593977 BAZ1AQ9NRL2 1556 aaPredicted RBP7.69□□□□□ -1.18
LINC00649-204ENST00000593977 CYB5RLQ6IPT4 315 aa7.69□□□□□ -1.18
LINC00649-204ENST00000593977 HOMEZQ8IX15 550 aa7.69□□□□□ -1.18
LINC00649-204ENST00000593977 CHGAP10645 457 aaKnown RBP7.68□□□□□ -1.18
LINC00649-204ENST00000593977 CIZ1Q9ULV3 898 aaPredicted RBP7.68□□□□□ -1.18
LINC00649-204ENST00000593977 GABBR2O75899 941 aa7.67□□□□□ -1.18
LINC00649-204ENST00000593977 TSHZ2Q9NRE2 1034 aa7.67□□□□□ -1.18
LINC00649-204ENST00000593977 ARHGEF11O15085 1522 aa7.66□□□□□ -1.18
LINC00649-204ENST00000593977 NCAPD3P42695 1498 aa7.63□□□□□ -1.19
LINC00649-204ENST00000593977 C19orf67A6NJJ6 358 aa7.62□□□□□ -1.19
LINC00649-204ENST00000593977 HS6ST3Q8IZP7 471 aa7.62□□□□□ -1.19
LINC00649-204ENST00000593977 SMARCA2P51531 1590 aa7.61□□□□□ -1.19
LINC00649-204ENST00000593977 GSE1Q14687 1217 aa7.59□□□□□ -1.19
LINC00649-204ENST00000593977 ERICH6Q7L0X2 663 aa7.59□□□□□ -1.19
LINC00649-204ENST00000593977 PRKAR2AP13861 404 aaKnown RBP7.58□□□□□ -1.2
LINC00649-204ENST00000593977 NBR1Q14596 966 aa7.58□□□□□ -1.2
LINC00649-204ENST00000593977 SOCS7O14512 581 aa7.54□□□□□ -1.2
LINC00649-204ENST00000593977 TMEM132AQ24JP5 1023 aa7.54□□□□□ -1.2
LINC00649-204ENST00000593977 ARAP1Q96P48 1450 aa7.54□□□□□ -1.2
LINC00649-204ENST00000593977 PDS5BQ9NTI5 1447 aa7.53□□□□□ -1.2
LINC00649-204ENST00000593977 KIF21AQ7Z4S6 1674 aa7.53□□□□□ -1.2
LINC00649-204ENST00000593977 RNF25Q96BH1 459 aaPredicted RBP7.52□□□□□ -1.21
LINC00649-204ENST00000593977 LAMC3Q9Y6N6 1575 aa7.51□□□□□ -1.21
LINC00649-204ENST00000593977 LMTK3Q96Q04 1460 aa7.51□□□□□ -1.21
LINC00649-204ENST00000593977 RIOK3O14730 519 aaKnown RBP7.51□□□□□ -1.21
LINC00649-204ENST00000593977 FBXO41Q8TF61 875 aa7.51□□□□□ -1.21
LINC00649-204ENST00000593977 NUBP1P53384 320 aa7.5□□□□□ -1.21
LINC00649-204ENST00000593977 WDR62O43379 1518 aa7.5□□□□□ -1.21
LINC00649-204ENST00000593977 MRC2Q9UBG0 1479 aa7.49□□□□□ -1.21
LINC00649-204ENST00000593977 KDM4FA0A1W2PPD8 638 aa7.49□□□□□ -1.21
LINC00649-204ENST00000593977 ATAD2BQ9ULI0 1458 aa7.49□□□□□ -1.21
LINC00649-204ENST00000593977 RANGAP1P46060 587 aaPredicted RBP7.48□□□□□ -1.21
LINC00649-204ENST00000593977 POTEIP0CG38 1075 aa7.47□□□□□ -1.21
LINC00649-204ENST00000593977 NKX1-1Q15270 411 aaPredicted RBP7.47□□□□□ -1.21
LINC00649-204ENST00000593977 DCAF8Q5TAQ9 597 aa7.47□□□□□ -1.21
LINC00649-204ENST00000593977 ILDR2Q71H61 639 aa7.47□□□□□ -1.21
LINC00649-204ENST00000593977 C14orf37Q86TY3 774 aa7.47□□□□□ -1.21
LINC00649-204ENST00000593977 DCAF1Q9Y4B6 1507 aa7.47□□□□□ -1.21
LINC00649-204ENST00000593977 VGFO15240 615 aaPredicted RBP7.46□□□□□ -1.22
LINC00649-204ENST00000593977 GTPBP6O43824 516 aaPredicted RBP7.46□□□□□ -1.22
LINC00649-204ENST00000593977 FAM212AQ96EL1 285 aa7.45□□□□□ -1.22
LINC00649-204ENST00000593977 RYDENQ9NUL5 291 aaKnown RBP7.45□□□□□ -1.22
LINC00649-204ENST00000593977 HMGXB3Q12766 1538 aa7.44□□□□□ -1.22
LINC00649-204ENST00000593977 STK25O00506 426 aa7.44□□□□□ -1.22
LINC00649-204ENST00000593977 CHRM1P11229 460 aaPredicted RBP7.44□□□□□ -1.22
LINC00649-204ENST00000593977 SPDYE1Q8NFV5 336 aaPredicted RBP7.44□□□□□ -1.22
LINC00649-204ENST00000593977 PODXL2Q9NZ53 605 aa7.44□□□□□ -1.22
LINC00649-204ENST00000593977 CLEC11AQ9Y240 323 aa7.44□□□□□ -1.22
LINC00649-204ENST00000593977 POTEMA6NI47 508 aa7.43□□□□□ -1.22
LINC00649-204ENST00000593977 SGIP1Q9BQI5 828 aa7.42□□□□□ -1.22
LINC00649-204ENST00000593977 CLCN6P51797 869 aa7.4□□□□□ -1.22
LINC00649-204ENST00000593977 PCDH10Q9P2E7 1040 aa7.4□□□□□ -1.22
LINC00649-204ENST00000593977 POTEGQ6S5H5 508 aa7.39□□□□□ -1.23
LINC00649-204ENST00000593977 RSF1Q96T23 1441 aaPredicted RBP7.38□□□□□ -1.23
LINC00649-204ENST00000593977 CREBZFQ9NS37 354 aa7.38□□□□□ -1.23
LINC00649-204ENST00000593977 ERCC6L2Q5T890 1561 aa7.37□□□□□ -1.23
LINC00649-204ENST00000593977 PRR29P0C7W0 189 aa7.37□□□□□ -1.23
LINC00649-204ENST00000593977 MNX1P50219 401 aaPredicted RBP7.37□□□□□ -1.23
LINC00649-204ENST00000593977 DCBLD2Q96PD2 775 aa7.37□□□□□ -1.23
LINC00649-204ENST00000593977 BCL11BQ9C0K0 894 aaPredicted RBP7.37□□□□□ -1.23
LINC00649-204ENST00000593977 CADPSQ9ULU8 1353 aa7.36□□□□□ -1.23
LINC00649-204ENST00000593977 P3H3Q8IVL6 736 aa7.36□□□□□ -1.23
LINC00649-204ENST00000593977 STK24Q9Y6E0 443 aa7.36□□□□□ -1.23
LINC00649-204ENST00000593977 ZCCHC6Q5VYS8 1495 aaKnown RBP7.36□□□□□ -1.23
LINC00649-204ENST00000593977 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.35□□□□□ -1.23
LINC00649-204ENST00000593977 ZFP91Q96JP5 570 aaPredicted RBP7.35□□□□□ -1.23
LINC00649-204ENST00000593977 CHADLQ6NUI6 762 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms