RNA–Protein interactions for RNA: ENST00000592657.1

LDLRAD4-216, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 2

Gene LDLRAD4, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-216ENST00000592657 OTUD5Q96G74 571 aa12.97□□□□□ -0.33
LDLRAD4-216ENST00000592657 PLSCR2Q9NRY7 297 aa12.96□□□□□ -0.33
LDLRAD4-216ENST00000592657 POTEB2H3BUK9 544 aa12.95□□□□□ -0.34
LDLRAD4-216ENST00000592657 C7P10643 843 aa12.94□□□□□ -0.34
LDLRAD4-216ENST00000592657 SLC39A7Q92504 469 aa12.94□□□□□ -0.34
LDLRAD4-216ENST00000592657 METRNQ9UJH8 293 aa12.94□□□□□ -0.34
LDLRAD4-216ENST00000592657 ASTLQ6HA08 431 aaPredicted RBP12.93□□□□□ -0.34
LDLRAD4-216ENST00000592657 ATMINO43313 823 aaPredicted RBP12.92□□□□□ -0.34
LDLRAD4-216ENST00000592657 PLCD3Q8N3E9 789 aa12.91□□□□□ -0.34
LDLRAD4-216ENST00000592657 CCDC61Q9Y6R9 512 aa12.89□□□□□ -0.35
LDLRAD4-216ENST00000592657 MAMSTRQ6ZN01 415 aa12.86□□□□□ -0.35
LDLRAD4-216ENST00000592657 KIF12Q96FN5 646 aa12.86□□□□□ -0.35
LDLRAD4-216ENST00000592657 ATN1P54259 1190 aaPredicted RBP12.82□□□□□ -0.36
LDLRAD4-216ENST00000592657 ZBTB47Q9UFB7 747 aaPredicted RBP12.81□□□□□ -0.36
LDLRAD4-216ENST00000592657 MAP3K13O43283 966 aa12.8□□□□□ -0.36
LDLRAD4-216ENST00000592657 RASEFQ8IZ41 740 aa12.79□□□□□ -0.36
LDLRAD4-216ENST00000592657 SCUBE2Q9NQ36 999 aa12.79□□□□□ -0.36
LDLRAD4-216ENST00000592657 POTEMA6NI47 508 aa12.77□□□□□ -0.37
LDLRAD4-216ENST00000592657 SEC24BO95487 1268 aa12.75□□□□□ -0.37
LDLRAD4-216ENST00000592657 BMP2KQ9NSY1 1161 aaPredicted RBP12.75□□□□□ -0.37
LDLRAD4-216ENST00000592657 TIE1P35590 1138 aa12.74□□□□□ -0.37
LDLRAD4-216ENST00000592657 POTEGQ6S5H5 508 aa12.74□□□□□ -0.37
LDLRAD4-216ENST00000592657 FAM163AQ96GL9 167 aaPredicted RBP12.71□□□□□ -0.37
LDLRAD4-216ENST00000592657 TRPC6Q9Y210 931 aa12.71□□□□□ -0.37
LDLRAD4-216ENST00000592657 POTEJP0CG39 1038 aa12.7□□□□□ -0.38
LDLRAD4-216ENST00000592657 PCDHB13Q9Y5F0 798 aa12.7□□□□□ -0.38
LDLRAD4-216ENST00000592657 FKBP8Q14318 412 aa12.67□□□□□ -0.38
LDLRAD4-216ENST00000592657 TTLL13PA6NNM8 815 aa12.65□□□□□ -0.38
LDLRAD4-216ENST00000592657 FAM212AQ96EL1 285 aa12.65□□□□□ -0.38
LDLRAD4-216ENST00000592657 SGIP1Q9BQI5 828 aa12.65□□□□□ -0.38
LDLRAD4-216ENST00000592657 PCDH10Q9P2E7 1040 aa12.62□□□□□ -0.39
LDLRAD4-216ENST00000592657 NUBP1P53384 320 aa12.61□□□□□ -0.39
LDLRAD4-216ENST00000592657 TRIM35Q9UPQ4 493 aa12.61□□□□□ -0.39
LDLRAD4-216ENST00000592657 DCAF8Q5TAQ9 597 aa12.59□□□□□ -0.39
LDLRAD4-216ENST00000592657 POTEFA5A3E0 1075 aa12.58□□□□□ -0.4
LDLRAD4-216ENST00000592657 COLQQ9Y215 455 aaPredicted RBP12.57□□□□□ -0.4
LDLRAD4-216ENST00000592657 IER5LQ5T953 404 aa12.56□□□□□ -0.4
LDLRAD4-216ENST00000592657 ZCCHC6Q5VYS8 1495 aaKnown RBP12.55□□□□□ -0.4
LDLRAD4-216ENST00000592657 IFNL1Q8IU54 200 aa12.55□□□□□ -0.4
LDLRAD4-216ENST00000592657 TMEM106CQ9BVX2 250 aa12.55□□□□□ -0.4
LDLRAD4-216ENST00000592657 FBXO3Q9UK99 471 aa12.54□□□□□ -0.4
LDLRAD4-216ENST00000592657 PLCG2P16885 1265 aa12.5□□□□□ -0.41
LDLRAD4-216ENST00000592657 PYGBP11216 843 aa12.47□□□□□ -0.41
LDLRAD4-216ENST00000592657 KLHL34Q8N239 644 aa12.47□□□□□ -0.41
LDLRAD4-216ENST00000592657 SLAIN1Q8ND83 568 aa12.46□□□□□ -0.41
LDLRAD4-216ENST00000592657 ABCC9O60706 1549 aa12.43□□□□□ -0.42
LDLRAD4-216ENST00000592657 LCE2DQ5TA82 110 aaPredicted RBP12.41□□□□□ -0.42
LDLRAD4-216ENST00000592657 DCAF1Q9Y4B6 1507 aa12.4□□□□□ -0.42
LDLRAD4-216ENST00000592657 PCDHB8Q9UN66 801 aa12.38□□□□□ -0.43
LDLRAD4-216ENST00000592657 OCEL1Q9H607 264 aa12.37□□□□□ -0.43
LDLRAD4-216ENST00000592657 GOLGA2Q08379 1002 aa12.36□□□□□ -0.43
LDLRAD4-216ENST00000592657 GSE1Q14687 1217 aa12.35□□□□□ -0.43
LDLRAD4-216ENST00000592657 IRX5P78411 483 aaPredicted RBP12.34□□□□□ -0.43
LDLRAD4-216ENST00000592657 CDAN1Q8IWY9 1227 aa12.33□□□□□ -0.44
LDLRAD4-216ENST00000592657 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.31□□□□□ -0.44
LDLRAD4-216ENST00000592657 MYO15BQ96JP2 1530 aa12.31□□□□□ -0.44
LDLRAD4-216ENST00000592657 ST18O60284 1047 aa12.29□□□□□ -0.44
LDLRAD4-216ENST00000592657 ZNF467Q7Z7K2 595 aaPredicted RBP12.29□□□□□ -0.44
LDLRAD4-216ENST00000592657 SNPHO15079 494 aa12.28□□□□□ -0.44
LDLRAD4-216ENST00000592657 VASPP50552 380 aaPredicted RBP12.28□□□□□ -0.44
LDLRAD4-216ENST00000592657 MKRN3Q13064 507 aaKnown RBP12.28□□□□□ -0.44
LDLRAD4-216ENST00000592657 NACADO15069 1562 aa12.27□□□□□ -0.44
LDLRAD4-216ENST00000592657 UNC13AQ9UPW8 1703 aa12.23□□□□□ -0.45
LDLRAD4-216ENST00000592657 RB1CC1Q8TDY2 1594 aa12.22□□□□□ -0.45
LDLRAD4-216ENST00000592657 C3orf67Q6ZVT6 689 aa12.21□□□□□ -0.45
LDLRAD4-216ENST00000592657 L3MBTL3Q96JM7 780 aaPredicted RBP12.2□□□□□ -0.46
LDLRAD4-216ENST00000592657 CHRM1P11229 460 aaPredicted RBP12.17□□□□□ -0.46
LDLRAD4-216ENST00000592657 TMEM121BQ9BXQ6 578 aaPredicted RBP12.17□□□□□ -0.46
LDLRAD4-216ENST00000592657 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.17□□□□□ -0.46
LDLRAD4-216ENST00000592657 PSEN1P49768 467 aa12.16□□□□□ -0.46
LDLRAD4-216ENST00000592657 CIZ1Q9ULV3 898 aaPredicted RBP12.16□□□□□ -0.46
LDLRAD4-216ENST00000592657 G3V3G9 751 aa12.13□□□□□ -0.47
LDLRAD4-216ENST00000592657 SPOCK2Q92563 424 aa12.12□□□□□ -0.47
LDLRAD4-216ENST00000592657 MARVELD3Q96A59 401 aa12.11□□□□□ -0.47
LDLRAD4-216ENST00000592657 PDCD7Q8N8D1 485 aaKnown RBP12.1□□□□□ -0.47
LDLRAD4-216ENST00000592657 PDAP1Q13442 181 aaKnown RBP12.09□□□□□ -0.47
LDLRAD4-216ENST00000592657 SCRIBQ14160 1630 aa12.07□□□□□ -0.48
LDLRAD4-216ENST00000592657 CABP2Q9NPB3 220 aa12.04□□□□□ -0.48
LDLRAD4-216ENST00000592657 EMP3P54852 163 aa12.03□□□□□ -0.48
LDLRAD4-216ENST00000592657 IFNLR1Q8IU57 520 aaPredicted RBP12.01□□□□□ -0.49
LDLRAD4-216ENST00000592657 SPNS2Q8IVW8 549 aa11.99□□□□□ -0.49
LDLRAD4-216ENST00000592657 DPY19L2Q6NUT2 758 aa11.98□□□□□ -0.49
LDLRAD4-216ENST00000592657 MMRN1Q13201 1228 aa11.97□□□□□ -0.49
LDLRAD4-216ENST00000592657 FAM205CA6NFA0 338 aa11.96□□□□□ -0.49
LDLRAD4-216ENST00000592657 BOLA1Q9Y3E2 137 aa11.96□□□□□ -0.49
LDLRAD4-216ENST00000592657 DCAF8L2P0C7V8 631 aa11.95□□□□□ -0.5
LDLRAD4-216ENST00000592657 ZNF710Q8N1W2 664 aa11.93□□□□□ -0.5
LDLRAD4-216ENST00000592657 TRIM41Q8WV44 630 aa11.9□□□□□ -0.5
LDLRAD4-216ENST00000592657 HS3ST6Q96QI5 342 aa11.9□□□□□ -0.5
LDLRAD4-216ENST00000592657 BICRAQ9NZM4 1560 aa11.89□□□□□ -0.51
LDLRAD4-216ENST00000592657 ILDR1Q86SU0 546 aaPredicted RBP11.88□□□□□ -0.51
LDLRAD4-216ENST00000592657 EFCAB3Q8N7B9 438 aa11.85□□□□□ -0.51
LDLRAD4-216ENST00000592657 DOK7Q18PE1 504 aa11.84□□□□□ -0.51
LDLRAD4-216ENST00000592657 RIMBP2O15034 1052 aa11.83□□□□□ -0.52
LDLRAD4-216ENST00000592657 SHROOM4Q9ULL8 1493 aa11.83□□□□□ -0.52
LDLRAD4-216ENST00000592657 ERBB3P21860 1342 aa11.82□□□□□ -0.52
LDLRAD4-216ENST00000592657 POTEB3A0JP26 581 aa11.79□□□□□ -0.52
LDLRAD4-216ENST00000592657 POTEBQ6S5H4 581 aa11.79□□□□□ -0.52
LDLRAD4-216ENST00000592657 HOXB3P14651 431 aaPredicted RBP11.78□□□□□ -0.52
LDLRAD4-216ENST00000592657 HOXB1P14653 301 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms