RNA–Protein interactions for RNA: ENST00000592442.1

LAMA3-213, Transcript of laminin subunit alpha 3, humanhuman

TSL 3

Gene LAMA3, Length 473 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-213ENST00000592442 CD44P16070 742 aaKnown RBP9.94□□□□□ -0.82
LAMA3-213ENST00000592442 DNAJC5Q9H3Z4 198 aa9.94□□□□□ -0.82
LAMA3-213ENST00000592442 ZRANB1Q9UGI0 708 aa9.89□□□□□ -0.83
LAMA3-213ENST00000592442 ECM2O94769 699 aaPredicted RBP9.88□□□□□ -0.83
LAMA3-213ENST00000592442 C19orf67A6NJJ6 358 aa9.85□□□□□ -0.83
LAMA3-213ENST00000592442 PKD2Q13563 968 aa9.85□□□□□ -0.83
LAMA3-213ENST00000592442 PYGBP11216 843 aa9.84□□□□□ -0.83
LAMA3-213ENST00000592442 TRIM41Q8WV44 630 aa9.84□□□□□ -0.83
LAMA3-213ENST00000592442 DCAF8L2P0C7V8 631 aa9.83□□□□□ -0.84
LAMA3-213ENST00000592442 CCDC180Q9P1Z9 1646 aa9.82□□□□□ -0.84
LAMA3-213ENST00000592442 CCDC61Q9Y6R9 512 aa9.81□□□□□ -0.84
LAMA3-213ENST00000592442 PHF12Q96QT6 1004 aa9.78□□□□□ -0.84
LAMA3-213ENST00000592442 EVX2Q03828 476 aa9.75□□□□□ -0.85
LAMA3-213ENST00000592442 ZNF579Q8NAF0 562 aaKnown RBP9.75□□□□□ -0.85
LAMA3-213ENST00000592442 PCDHB13Q9Y5F0 798 aa9.74□□□□□ -0.85
LAMA3-213ENST00000592442 RGL2O15211 777 aa9.73□□□□□ -0.85
LAMA3-213ENST00000592442 CHRM1P11229 460 aaPredicted RBP9.73□□□□□ -0.85
LAMA3-213ENST00000592442 MAP3K13O43283 966 aa9.72□□□□□ -0.85
LAMA3-213ENST00000592442 KIF12Q96FN5 646 aa9.71□□□□□ -0.86
LAMA3-213ENST00000592442 RIOK3O14730 519 aaKnown RBP9.7□□□□□ -0.86
LAMA3-213ENST00000592442 ZNF467Q7Z7K2 595 aaPredicted RBP9.7□□□□□ -0.86
LAMA3-213ENST00000592442 TAOK2Q9UL54 1235 aa9.68□□□□□ -0.86
LAMA3-213ENST00000592442 PCDHB8Q9UN66 801 aa9.68□□□□□ -0.86
LAMA3-213ENST00000592442 RNF25Q96BH1 459 aaPredicted RBP9.67□□□□□ -0.86
LAMA3-213ENST00000592442 IFNL1Q8IU54 200 aa9.66□□□□□ -0.86
LAMA3-213ENST00000592442 MS4A3Q96HJ5 214 aa9.66□□□□□ -0.86
LAMA3-213ENST00000592442 SGIP1Q9BQI5 828 aa9.66□□□□□ -0.86
LAMA3-213ENST00000592442 VGFO15240 615 aaPredicted RBP9.63□□□□□ -0.87
LAMA3-213ENST00000592442 CLCN6P51797 869 aa9.63□□□□□ -0.87
LAMA3-213ENST00000592442 GALR2O43603 387 aaPredicted RBP9.62□□□□□ -0.87
LAMA3-213ENST00000592442 SP7Q8TDD2 431 aaPredicted RBP9.62□□□□□ -0.87
LAMA3-213ENST00000592442 STK25O00506 426 aa9.6□□□□□ -0.87
LAMA3-213ENST00000592442 GABBR2O75899 941 aa9.6□□□□□ -0.87
LAMA3-213ENST00000592442 CHGAP10645 457 aaKnown RBP9.6□□□□□ -0.87
LAMA3-213ENST00000592442 PDAP1Q13442 181 aaKnown RBP9.6□□□□□ -0.87
LAMA3-213ENST00000592442 ABCC9O60706 1549 aa9.6□□□□□ -0.87
LAMA3-213ENST00000592442 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.58□□□□□ -0.88
LAMA3-213ENST00000592442 PSEN1P49768 467 aa9.58□□□□□ -0.88
LAMA3-213ENST00000592442 ZFP91Q96JP5 570 aaPredicted RBP9.58□□□□□ -0.88
LAMA3-213ENST00000592442 STK24Q9Y6E0 443 aa9.56□□□□□ -0.88
LAMA3-213ENST00000592442 DCBLD2Q96PD2 775 aa9.55□□□□□ -0.88
LAMA3-213ENST00000592442 TMEM106CQ9BVX2 250 aa9.55□□□□□ -0.88
LAMA3-213ENST00000592442 BCL11BQ9C0K0 894 aaPredicted RBP9.55□□□□□ -0.88
LAMA3-213ENST00000592442 TRPC6Q9Y210 931 aa9.55□□□□□ -0.88
LAMA3-213ENST00000592442 GOLGA2Q08379 1002 aa9.53□□□□□ -0.88
LAMA3-213ENST00000592442 TIE1P35590 1138 aa9.51□□□□□ -0.89
LAMA3-213ENST00000592442 HS6ST3Q8IZP7 471 aa9.51□□□□□ -0.89
LAMA3-213ENST00000592442 CABP2Q9NPB3 220 aa9.5□□□□□ -0.89
LAMA3-213ENST00000592442 TTLL13PA6NNM8 815 aa9.49□□□□□ -0.89
LAMA3-213ENST00000592442 BMP2KQ9NSY1 1161 aaPredicted RBP9.49□□□□□ -0.89
LAMA3-213ENST00000592442 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.46□□□□□ -0.9
LAMA3-213ENST00000592442 MKRN3Q13064 507 aaKnown RBP9.45□□□□□ -0.9
LAMA3-213ENST00000592442 TRIM35Q9UPQ4 493 aa9.45□□□□□ -0.9
LAMA3-213ENST00000592442 ATMINO43313 823 aaPredicted RBP9.43□□□□□ -0.9
LAMA3-213ENST00000592442 ATN1P54259 1190 aaPredicted RBP9.43□□□□□ -0.9
LAMA3-213ENST00000592442 BBXQ8WY36 941 aaPredicted RBP9.43□□□□□ -0.9
LAMA3-213ENST00000592442 ASTLQ6HA08 431 aaPredicted RBP9.42□□□□□ -0.9
LAMA3-213ENST00000592442 EFCAB3Q8N7B9 438 aa9.42□□□□□ -0.9
LAMA3-213ENST00000592442 CFAP44Q96MT7 982 aa9.38□□□□□ -0.91
LAMA3-213ENST00000592442 PAXIP1Q6ZW49 1069 aaPredicted RBP9.36□□□□□ -0.91
LAMA3-213ENST00000592442 SOX12O15370 315 aa9.35□□□□□ -0.91
LAMA3-213ENST00000592442 SEC24BO95487 1268 aa9.35□□□□□ -0.91
LAMA3-213ENST00000592442 POTEIP0CG38 1075 aa9.35□□□□□ -0.91
LAMA3-213ENST00000592442 NKX1-1Q15270 411 aaPredicted RBP9.35□□□□□ -0.91
LAMA3-213ENST00000592442 RYDENQ9NUL5 291 aaKnown RBP9.35□□□□□ -0.91
LAMA3-213ENST00000592442 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.35□□□□□ -0.91
LAMA3-213ENST00000592442 NLRP6P59044 892 aa9.34□□□□□ -0.91
LAMA3-213ENST00000592442 PELP1Q8IZL8 1130 aaKnown RBP9.34□□□□□ -0.91
LAMA3-213ENST00000592442 SPRYD3Q8NCJ5 442 aa9.34□□□□□ -0.91
LAMA3-213ENST00000592442 SLC39A7Q92504 469 aa9.34□□□□□ -0.91
LAMA3-213ENST00000592442 PHF8Q9UPP1 1060 aa9.34□□□□□ -0.91
LAMA3-213ENST00000592442 PLCG2P16885 1265 aa9.32□□□□□ -0.92
LAMA3-213ENST00000592442 IER5LQ5T953 404 aa9.32□□□□□ -0.92
LAMA3-213ENST00000592442 MFRPQ9BY79 579 aa9.32□□□□□ -0.92
LAMA3-213ENST00000592442 METRNQ9UJH8 293 aa9.32□□□□□ -0.92
LAMA3-213ENST00000592442 C7P10643 843 aa9.31□□□□□ -0.92
LAMA3-213ENST00000592442 PLCB2Q00722 1185 aa9.29□□□□□ -0.92
LAMA3-213ENST00000592442 OCEL1Q9H607 264 aa9.28□□□□□ -0.92
LAMA3-213ENST00000592442 GTPBP6O43824 516 aaPredicted RBP9.27□□□□□ -0.93
LAMA3-213ENST00000592442 RB1CC1Q8TDY2 1594 aa9.26□□□□□ -0.93
LAMA3-213ENST00000592442 G3V3G9 751 aa9.26□□□□□ -0.93
LAMA3-213ENST00000592442 IRX5P78411 483 aaPredicted RBP9.26□□□□□ -0.93
LAMA3-213ENST00000592442 FBXO22Q8NEZ5 403 aa9.26□□□□□ -0.93
LAMA3-213ENST00000592442 ZCCHC6Q5VYS8 1495 aaKnown RBP9.26□□□□□ -0.93
LAMA3-213ENST00000592442 NACADO15069 1562 aa9.25□□□□□ -0.93
LAMA3-213ENST00000592442 COLQQ9Y215 455 aaPredicted RBP9.24□□□□□ -0.93
LAMA3-213ENST00000592442 HAP1P54257 671 aaPredicted RBP9.23□□□□□ -0.93
LAMA3-213ENST00000592442 PDCD7Q8N8D1 485 aaKnown RBP9.23□□□□□ -0.93
LAMA3-213ENST00000592442 MS4A4AQ96JQ5 239 aa9.23□□□□□ -0.93
LAMA3-213ENST00000592442 DPY19L2Q6NUT2 758 aa9.22□□□□□ -0.93
LAMA3-213ENST00000592442 MYO15BQ96JP2 1530 aa9.2□□□□□ -0.94
LAMA3-213ENST00000592442 PPP1R37O75864 691 aa9.19□□□□□ -0.94
LAMA3-213ENST00000592442 ILDR1Q86SU0 546 aaPredicted RBP9.19□□□□□ -0.94
LAMA3-213ENST00000592442 L3MBTL3Q96JM7 780 aaPredicted RBP9.19□□□□□ -0.94
LAMA3-213ENST00000592442 DCAF1Q9Y4B6 1507 aa9.19□□□□□ -0.94
LAMA3-213ENST00000592442 POTEFA5A3E0 1075 aa9.17□□□□□ -0.94
LAMA3-213ENST00000592442 BOLA1Q9Y3E2 137 aa9.17□□□□□ -0.94
LAMA3-213ENST00000592442 C3orf67Q6ZVT6 689 aa9.14□□□□□ -0.95
LAMA3-213ENST00000592442 MICALL2Q8IY33 904 aa9.13□□□□□ -0.95
LAMA3-213ENST00000592442 TSHZ2Q9NRE2 1034 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms