RNA–Protein interactions for RNA: ENST00000590723.5

NPC1-209, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-209ENST00000590723 ZNF579Q8NAF0 562 aaKnown RBP18.04■□□□□ 0.48
NPC1-209ENST00000590723 GSE1Q14687 1217 aa17.96■□□□□ 0.47
NPC1-209ENST00000590723 DCAF8Q5TAQ9 597 aa17.96■□□□□ 0.47
NPC1-209ENST00000590723 CCDC61Q9Y6R9 512 aa17.92■□□□□ 0.46
NPC1-209ENST00000590723 GABBR2O75899 941 aa17.88■□□□□ 0.45
NPC1-209ENST00000590723 PHF12Q96QT6 1004 aa17.87■□□□□ 0.45
NPC1-209ENST00000590723 CIZ1Q9ULV3 898 aaPredicted RBP17.82■□□□□ 0.44
NPC1-209ENST00000590723 KIF12Q96FN5 646 aa17.77■□□□□ 0.44
NPC1-209ENST00000590723 SGIP1Q9BQI5 828 aa17.75■□□□□ 0.43
NPC1-209ENST00000590723 TRIM41Q8WV44 630 aa17.74■□□□□ 0.43
NPC1-209ENST00000590723 MAP3K13O43283 966 aa17.69■□□□□ 0.42
NPC1-209ENST00000590723 PYGBP11216 843 aa17.69■□□□□ 0.42
NPC1-209ENST00000590723 GALR2O43603 387 aaPredicted RBP17.68■□□□□ 0.42
NPC1-209ENST00000590723 PCDHB13Q9Y5F0 798 aa17.68■□□□□ 0.42
NPC1-209ENST00000590723 CHRM1P11229 460 aaPredicted RBP17.67■□□□□ 0.42
NPC1-209ENST00000590723 MS4A3Q96HJ5 214 aa17.67■□□□□ 0.42
NPC1-209ENST00000590723 DCBLD2Q96PD2 775 aa17.66■□□□□ 0.42
NPC1-209ENST00000590723 ZNF467Q7Z7K2 595 aaPredicted RBP17.58■□□□□ 0.4
NPC1-209ENST00000590723 IFNL1Q8IU54 200 aa17.53■□□□□ 0.4
NPC1-209ENST00000590723 TIE1P35590 1138 aa17.5■□□□□ 0.39
NPC1-209ENST00000590723 PCDHB8Q9UN66 801 aa17.45■□□□□ 0.38
NPC1-209ENST00000590723 ECM2O94769 699 aaPredicted RBP17.44■□□□□ 0.38
NPC1-209ENST00000590723 ASTLQ6HA08 431 aaPredicted RBP17.43■□□□□ 0.38
NPC1-209ENST00000590723 PKD2Q13563 968 aa17.4■□□□□ 0.38
NPC1-209ENST00000590723 TAOK2Q9UL54 1235 aa17.4■□□□□ 0.38
NPC1-209ENST00000590723 ATMINO43313 823 aaPredicted RBP17.39■□□□□ 0.37
NPC1-209ENST00000590723 POTEIP0CG38 1075 aa17.39■□□□□ 0.37
NPC1-209ENST00000590723 BMP2KQ9NSY1 1161 aaPredicted RBP17.39■□□□□ 0.37
NPC1-209ENST00000590723 TRPC6Q9Y210 931 aa17.38■□□□□ 0.37
NPC1-209ENST00000590723 TTLL13PA6NNM8 815 aa17.36■□□□□ 0.37
NPC1-209ENST00000590723 PDAP1Q13442 181 aaKnown RBP17.36■□□□□ 0.37
NPC1-209ENST00000590723 TMEM106CQ9BVX2 250 aa17.36■□□□□ 0.37
NPC1-209ENST00000590723 RIOK3O14730 519 aaKnown RBP17.35■□□□□ 0.37
NPC1-209ENST00000590723 PSEN1P49768 467 aa17.32■□□□□ 0.36
NPC1-209ENST00000590723 ATN1P54259 1190 aaPredicted RBP17.31■□□□□ 0.36
NPC1-209ENST00000590723 SLC39A7Q92504 469 aa17.29■□□□□ 0.36
NPC1-209ENST00000590723 VGFO15240 615 aaPredicted RBP17.28■□□□□ 0.36
NPC1-209ENST00000590723 TRIM35Q9UPQ4 493 aa17.26■□□□□ 0.35
NPC1-209ENST00000590723 C7P10643 843 aa17.25■□□□□ 0.35
NPC1-209ENST00000590723 GOLGA2Q08379 1002 aa17.25■□□□□ 0.35
NPC1-209ENST00000590723 RNF25Q96BH1 459 aaPredicted RBP17.25■□□□□ 0.35
NPC1-209ENST00000590723 AMER1Q5JTC6 1135 aaPredicted RBP17.24■□□□□ 0.35
NPC1-209ENST00000590723 IER5LQ5T953 404 aa17.21■□□□□ 0.35
NPC1-209ENST00000590723 PELP1Q8IZL8 1130 aaKnown RBP17.21■□□□□ 0.35
NPC1-209ENST00000590723 RGL2O15211 777 aa17.19■□□□□ 0.34
NPC1-209ENST00000590723 METRNQ9UJH8 293 aa17.19■□□□□ 0.34
NPC1-209ENST00000590723 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.14■□□□□ 0.33
NPC1-209ENST00000590723 MKRN3Q13064 507 aaKnown RBP17.14■□□□□ 0.33
NPC1-209ENST00000590723 ZFP91Q96JP5 570 aaPredicted RBP17.14■□□□□ 0.33
NPC1-209ENST00000590723 SEC24BO95487 1268 aa17.13■□□□□ 0.33
NPC1-209ENST00000590723 CABP2Q9NPB3 220 aa17.1■□□□□ 0.33
NPC1-209ENST00000590723 STK25O00506 426 aa17.06■□□□□ 0.32
NPC1-209ENST00000590723 PLCG2P16885 1265 aa17.04■□□□□ 0.32
NPC1-209ENST00000590723 LHX8Q68G74 356 aa17.03■□□□□ 0.32
NPC1-209ENST00000590723 BCL11BQ9C0K0 894 aaPredicted RBP17.03■□□□□ 0.32
NPC1-209ENST00000590723 STK24Q9Y6E0 443 aa17.02■□□□□ 0.32
NPC1-209ENST00000590723 OCEL1Q9H607 264 aa17.01■□□□□ 0.31
NPC1-209ENST00000590723 IRX5P78411 483 aaPredicted RBP16.99■□□□□ 0.31
NPC1-209ENST00000590723 RTN4Q9NQC3 1192 aaKnown RBP16.99■□□□□ 0.31
NPC1-209ENST00000590723 DCAF8L2P0C7V8 631 aa16.97■□□□□ 0.31
NPC1-209ENST00000590723 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.96■□□□□ 0.31
NPC1-209ENST00000590723 SOX12O15370 315 aa16.95■□□□□ 0.3
NPC1-209ENST00000590723 EFCAB3Q8N7B9 438 aa16.95■□□□□ 0.3
NPC1-209ENST00000590723 COLQQ9Y215 455 aaPredicted RBP16.94■□□□□ 0.3
NPC1-209ENST00000590723 HS6ST3Q8IZP7 471 aa16.92■□□□□ 0.3
NPC1-209ENST00000590723 POTEFA5A3E0 1075 aa16.91■□□□□ 0.3
NPC1-209ENST00000590723 CHGAP10645 457 aaKnown RBP16.9■□□□□ 0.3
NPC1-209ENST00000590723 MAMSTRQ6ZN01 415 aa16.9■□□□□ 0.3
NPC1-209ENST00000590723 ILDR1Q86SU0 546 aaPredicted RBP16.85■□□□□ 0.29
NPC1-209ENST00000590723 PDCD7Q8N8D1 485 aaKnown RBP16.84■□□□□ 0.29
NPC1-209ENST00000590723 L3MBTL3Q96JM7 780 aaPredicted RBP16.84■□□□□ 0.29
NPC1-209ENST00000590723 POTEB2H3BUK9 544 aa16.83■□□□□ 0.28
NPC1-209ENST00000590723 NLRP6P59044 892 aa16.83■□□□□ 0.28
NPC1-209ENST00000590723 SCUBE2Q9NQ36 999 aa16.83■□□□□ 0.28
NPC1-209ENST00000590723 G3V3G9 751 aa16.81■□□□□ 0.28
NPC1-209ENST00000590723 NISCHQ9Y2I1 1504 aa16.77■□□□□ 0.28
NPC1-209ENST00000590723 PHF8Q9UPP1 1060 aa16.76■□□□□ 0.27
NPC1-209ENST00000590723 DNAJC5Q9H3Z4 198 aa16.75■□□□□ 0.27
NPC1-209ENST00000590723 RYDENQ9NUL5 291 aaKnown RBP16.74■□□□□ 0.27
NPC1-209ENST00000590723 MFRPQ9BY79 579 aa16.71■□□□□ 0.27
NPC1-209ENST00000590723 POTEJP0CG39 1038 aa16.7■□□□□ 0.26
NPC1-209ENST00000590723 C3orf67Q6ZVT6 689 aa16.68■□□□□ 0.26
NPC1-209ENST00000590723 FBXO22Q8NEZ5 403 aa16.68■□□□□ 0.26
NPC1-209ENST00000590723 OTUD5Q96G74 571 aa16.68■□□□□ 0.26
NPC1-209ENST00000590723 BOLA1Q9Y3E2 137 aa16.68■□□□□ 0.26
NPC1-209ENST00000590723 DPY19L2Q6NUT2 758 aa16.67■□□□□ 0.26
NPC1-209ENST00000590723 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.66■□□□□ 0.26
NPC1-209ENST00000590723 MS4A4AQ96JQ5 239 aa16.65■□□□□ 0.26
NPC1-209ENST00000590723 BBXQ8WY36 941 aaPredicted RBP16.56■□□□□ 0.24
NPC1-209ENST00000590723 TMEM121BQ9BXQ6 578 aaPredicted RBP16.56■□□□□ 0.24
NPC1-209ENST00000590723 NKX1-1Q15270 411 aaPredicted RBP16.55■□□□□ 0.24
NPC1-209ENST00000590723 MICALL2Q8IY33 904 aa16.55■□□□□ 0.24
NPC1-209ENST00000590723 SLAIN1Q8ND83 568 aa16.55■□□□□ 0.24
NPC1-209ENST00000590723 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.51■□□□□ 0.23
NPC1-209ENST00000590723 GTPBP6O43824 516 aaPredicted RBP16.43■□□□□ 0.22
NPC1-209ENST00000590723 SNPHO15079 494 aa16.41■□□□□ 0.22
NPC1-209ENST00000590723 PPP1R37O75864 691 aa16.41■□□□□ 0.22
NPC1-209ENST00000590723 SPRYD3Q8NCJ5 442 aa16.36■□□□□ 0.21
NPC1-209ENST00000590723 TMC2Q8TDI7 906 aa16.31■□□□□ 0.2
NPC1-209ENST00000590723 TMEM92Q6UXU6 159 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms