RNA–Protein interactions for RNA: ENST00000590104.1

LAMA3-211, Transcript of laminin subunit alpha 3, humanhuman

TSL 5

Gene LAMA3, Length 462 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-211ENST00000590104 THOC2Q8NI27 1593 aaKnown RBP12.99□□□□□ -0.33
LAMA3-211ENST00000590104 CD44P16070 742 aaKnown RBP12.98□□□□□ -0.33
LAMA3-211ENST00000590104 ILDR1Q86SU0 546 aaPredicted RBP12.9□□□□□ -0.34
LAMA3-211ENST00000590104 CREBZFQ9NS37 354 aa12.9□□□□□ -0.34
LAMA3-211ENST00000590104 SMARCA2P51531 1590 aa12.9□□□□□ -0.35
LAMA3-211ENST00000590104 BAZ1AQ9NRL2 1556 aaPredicted RBP12.88□□□□□ -0.35
LAMA3-211ENST00000590104 RIMBP3CA6NJZ7 1639 aa12.85□□□□□ -0.35
LAMA3-211ENST00000590104 RIMBP3BA6NNM3 1639 aa12.85□□□□□ -0.35
LAMA3-211ENST00000590104 RIMBP3Q9UFD9 1639 aa12.85□□□□□ -0.35
LAMA3-211ENST00000590104 CLCN6P51797 869 aa12.81□□□□□ -0.36
LAMA3-211ENST00000590104 ZRANB1Q9UGI0 708 aa12.81□□□□□ -0.36
LAMA3-211ENST00000590104 KIF21AQ7Z4S6 1674 aa12.8□□□□□ -0.36
LAMA3-211ENST00000590104 NCAPD3P42695 1498 aa12.78□□□□□ -0.36
LAMA3-211ENST00000590104 ZNF579Q8NAF0 562 aaKnown RBP12.76□□□□□ -0.37
LAMA3-211ENST00000590104 LHX8Q68G74 356 aa12.74□□□□□ -0.37
LAMA3-211ENST00000590104 CYB5RLQ6IPT4 315 aa12.74□□□□□ -0.37
LAMA3-211ENST00000590104 POTEIP0CG38 1075 aa12.72□□□□□ -0.37
LAMA3-211ENST00000590104 DCBLD2Q96PD2 775 aa12.71□□□□□ -0.37
LAMA3-211ENST00000590104 PAK3O75914 559 aaPredicted RBP12.7□□□□□ -0.38
LAMA3-211ENST00000590104 NPM1P06748 294 aaKnown RBP eCLIP12.7□□□□□ -0.38
LAMA3-211ENST00000590104 ARHGEF11O15085 1522 aa12.68□□□□□ -0.38
LAMA3-211ENST00000590104 LAMC3Q9Y6N6 1575 aa12.66□□□□□ -0.38
LAMA3-211ENST00000590104 MNX1P50219 401 aaPredicted RBP12.65□□□□□ -0.38
LAMA3-211ENST00000590104 PROM2Q8N271 834 aa12.65□□□□□ -0.38
LAMA3-211ENST00000590104 PDS5BQ9NTI5 1447 aa12.63□□□□□ -0.39
LAMA3-211ENST00000590104 ATAD2BQ9ULI0 1458 aa12.63□□□□□ -0.39
LAMA3-211ENST00000590104 GALR2O43603 387 aaPredicted RBP12.62□□□□□ -0.39
LAMA3-211ENST00000590104 PHF12Q96QT6 1004 aa12.6□□□□□ -0.39
LAMA3-211ENST00000590104 MRC2Q9UBG0 1479 aa12.59□□□□□ -0.39
LAMA3-211ENST00000590104 WDR62O43379 1518 aa12.57□□□□□ -0.4
LAMA3-211ENST00000590104 HMGXB3Q12766 1538 aa12.57□□□□□ -0.4
LAMA3-211ENST00000590104 ARAP1Q96P48 1450 aa12.5□□□□□ -0.41
LAMA3-211ENST00000590104 PLEKHG5O94827 1062 aa12.49□□□□□ -0.41
LAMA3-211ENST00000590104 BAZ1BQ9UIG0 1483 aaKnown RBP12.48□□□□□ -0.41
LAMA3-211ENST00000590104 TSPYL2Q9H2G4 693 aaPredicted RBP12.48□□□□□ -0.41
LAMA3-211ENST00000590104 MIER1Q8N108 512 aa12.46□□□□□ -0.41
LAMA3-211ENST00000590104 MS4A3Q96HJ5 214 aa12.43□□□□□ -0.42
LAMA3-211ENST00000590104 SMARCA4P51532 1647 aa12.39□□□□□ -0.43
LAMA3-211ENST00000590104 CCDC61Q9Y6R9 512 aa12.38□□□□□ -0.43
LAMA3-211ENST00000590104 CADPSQ9ULU8 1353 aa12.38□□□□□ -0.43
LAMA3-211ENST00000590104 PLCD3Q8N3E9 789 aa12.37□□□□□ -0.43
LAMA3-211ENST00000590104 PELP1Q8IZL8 1130 aaKnown RBP12.36□□□□□ -0.43
LAMA3-211ENST00000590104 CEP164Q9UPV0 1460 aa12.35□□□□□ -0.43
LAMA3-211ENST00000590104 FKBP8Q14318 412 aa12.33□□□□□ -0.44
LAMA3-211ENST00000590104 ASTLQ6HA08 431 aaPredicted RBP12.33□□□□□ -0.44
LAMA3-211ENST00000590104 POTEB2H3BUK9 544 aa12.32□□□□□ -0.44
LAMA3-211ENST00000590104 ATMINO43313 823 aaPredicted RBP12.32□□□□□ -0.44
LAMA3-211ENST00000590104 RASEFQ8IZ41 740 aa12.31□□□□□ -0.44
LAMA3-211ENST00000590104 KIF12Q96FN5 646 aa12.31□□□□□ -0.44
LAMA3-211ENST00000590104 OTUD5Q96G74 571 aa12.29□□□□□ -0.44
LAMA3-211ENST00000590104 METRNQ9UJH8 293 aa12.29□□□□□ -0.44
LAMA3-211ENST00000590104 SLC39A7Q92504 469 aa12.28□□□□□ -0.44
LAMA3-211ENST00000590104 ZBTB47Q9UFB7 747 aaPredicted RBP12.27□□□□□ -0.45
LAMA3-211ENST00000590104 ZNF608Q9ULD9 1512 aaPredicted RBP12.27□□□□□ -0.45
LAMA3-211ENST00000590104 CHD1O14646 1710 aa12.26□□□□□ -0.45
LAMA3-211ENST00000590104 C7P10643 843 aa12.26□□□□□ -0.45
LAMA3-211ENST00000590104 FANCD2Q9BXW9 1451 aa12.26□□□□□ -0.45
LAMA3-211ENST00000590104 KDM4FA0A1W2PPD8 638 aa12.25□□□□□ -0.45
LAMA3-211ENST00000590104 MAP3K13O43283 966 aa12.25□□□□□ -0.45
LAMA3-211ENST00000590104 PEG3Q9GZU2 1588 aa12.25□□□□□ -0.45
LAMA3-211ENST00000590104 RSF1Q96T23 1441 aaPredicted RBP12.24□□□□□ -0.45
LAMA3-211ENST00000590104 ATN1P54259 1190 aaPredicted RBP12.23□□□□□ -0.45
LAMA3-211ENST00000590104 URB2Q14146 1524 aaKnown RBP12.22□□□□□ -0.45
LAMA3-211ENST00000590104 BMP2KQ9NSY1 1161 aaPredicted RBP12.19□□□□□ -0.46
LAMA3-211ENST00000590104 TRPC6Q9Y210 931 aa12.19□□□□□ -0.46
LAMA3-211ENST00000590104 TIE1P35590 1138 aa12.17□□□□□ -0.46
LAMA3-211ENST00000590104 NUBP1P53384 320 aa12.17□□□□□ -0.46
LAMA3-211ENST00000590104 LMTK3Q96Q04 1460 aa12.16□□□□□ -0.46
LAMA3-211ENST00000590104 MROH2BQ7Z745 1585 aa12.16□□□□□ -0.46
LAMA3-211ENST00000590104 FBXO41Q8TF61 875 aa12.14□□□□□ -0.47
LAMA3-211ENST00000590104 FAM212AQ96EL1 285 aa12.14□□□□□ -0.47
LAMA3-211ENST00000590104 PCDHB13Q9Y5F0 798 aa12.14□□□□□ -0.47
LAMA3-211ENST00000590104 MAMSTRQ6ZN01 415 aa12.12□□□□□ -0.47
LAMA3-211ENST00000590104 SGIP1Q9BQI5 828 aa12.12□□□□□ -0.47
LAMA3-211ENST00000590104 IFT140Q96RY7 1462 aa12.12□□□□□ -0.47
LAMA3-211ENST00000590104 EIF4G3O43432 1585 aaKnown RBP12.12□□□□□ -0.47
LAMA3-211ENST00000590104 POTEJP0CG39 1038 aa12.11□□□□□ -0.47
LAMA3-211ENST00000590104 FBXO3Q9UK99 471 aa12.11□□□□□ -0.47
LAMA3-211ENST00000590104 TTLL13PA6NNM8 815 aa12.1□□□□□ -0.47
LAMA3-211ENST00000590104 SOCS7O14512 581 aa12.09□□□□□ -0.47
LAMA3-211ENST00000590104 ERCC6L2Q5T890 1561 aa12.08□□□□□ -0.48
LAMA3-211ENST00000590104 SCUBE2Q9NQ36 999 aa12.07□□□□□ -0.48
LAMA3-211ENST00000590104 POTEFA5A3E0 1075 aa12.05□□□□□ -0.48
LAMA3-211ENST00000590104 ILDR2Q71H61 639 aa12.05□□□□□ -0.48
LAMA3-211ENST00000590104 HECW2Q9P2P5 1572 aa12.05□□□□□ -0.48
LAMA3-211ENST00000590104 AQRO60306 1485 aaKnown RBP eCLIP12.04□□□□□ -0.48
LAMA3-211ENST00000590104 SEC24BO95487 1268 aa12.04□□□□□ -0.48
LAMA3-211ENST00000590104 IFNL1Q8IU54 200 aa12.04□□□□□ -0.48
LAMA3-211ENST00000590104 TRIM35Q9UPQ4 493 aa12.04□□□□□ -0.48
LAMA3-211ENST00000590104 KIF13AQ9H1H9 1805 aa12.03□□□□□ -0.48
LAMA3-211ENST00000590104 DCAF8Q5TAQ9 597 aa12.03□□□□□ -0.48
LAMA3-211ENST00000590104 CLASP1Q7Z460 1538 aa12.01□□□□□ -0.49
LAMA3-211ENST00000590104 CFTRP13569 1480 aa12.01□□□□□ -0.49
LAMA3-211ENST00000590104 GAPVD1Q14C86 1478 aa12.01□□□□□ -0.49
LAMA3-211ENST00000590104 POTEMA6NI47 508 aa12□□□□□ -0.49
LAMA3-211ENST00000590104 COLQQ9Y215 455 aaPredicted RBP12□□□□□ -0.49
LAMA3-211ENST00000590104 IER5LQ5T953 404 aa11.99□□□□□ -0.49
LAMA3-211ENST00000590104 TMEM106CQ9BVX2 250 aa11.99□□□□□ -0.49
LAMA3-211ENST00000590104 PLSCR2Q9NRY7 297 aa11.99□□□□□ -0.49
LAMA3-211ENST00000590104 POTEGQ6S5H5 508 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms