RNA–Protein interactions for RNA: ENST00000589028.5

ERC1-222, Transcript of ELKS/RAB6-interacting/CAST family member 1, human

APPRIS P1 TSL 1 (best) BASIC

Gene ERC1, Length 9,202 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERC1-222	ENST00000589028	PNN	Q9H307	717 aa	Known RBP	8.07	□□□□□ -1.12
ERC1-222	ENST00000589028	HMGB1	P09429	215 aa	Known RBP	8.07	□□□□□ -1.12
ERC1-222	ENST00000589028	USP35	Q9P2H5	1018 aa		8.07	□□□□□ -1.12
ERC1-222	ENST00000589028	LOC105371045	A0A1W2PR82	267 aa		8.05	□□□□□ -1.12
ERC1-222	ENST00000589028	PPM1G	O15355	546 aa	Predicted RBP	8.05	□□□□□ -1.12
ERC1-222	ENST00000589028	PTMA	P06454	111 aa	Known RBP	8.05	□□□□□ -1.12
ERC1-222	ENST00000589028	LAS1L	Q9Y4W2	734 aa	Known RBP	8.05	□□□□□ -1.12
ERC1-222	ENST00000589028	NCBP3	Q53F19	620 aa	Known RBP	8.04	□□□□□ -1.12
ERC1-222	ENST00000589028	UPF2	Q9HAU5	1272 aa	Known RBP	8.04	□□□□□ -1.12
ERC1-222	ENST00000589028	DDRGK1	Q96HY6	314 aa		8.03	□□□□□ -1.12
ERC1-222	ENST00000589028	ZCCHC6	Q5VYS8	1495 aa	Known RBP	8.02	□□□□□ -1.13
ERC1-222	ENST00000589028	SALL2	Q9Y467	1007 aa	Predicted RBP	8.02	□□□□□ -1.13
ERC1-222	ENST00000589028	ANP32C	O43423	234 aa		8.01	□□□□□ -1.13
ERC1-222	ENST00000589028	MSN	P26038	577 aa	Known RBP	8.01	□□□□□ -1.13
ERC1-222	ENST00000589028	CHAF1A	Q13111	956 aa	Predicted RBP	8	□□□□□ -1.13
ERC1-222	ENST00000589028	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	8	□□□□□ -1.13
ERC1-222	ENST00000589028	L1TD1	Q5T7N2	865 aa	Known RBP	7.99	□□□□□ -1.13
ERC1-222	ENST00000589028	TPRN	Q4KMQ1	711 aa		7.99	□□□□□ -1.13
ERC1-222	ENST00000589028	CCDC9	Q9Y3X0	531 aa	Known RBP	7.99	□□□□□ -1.13
ERC1-222	ENST00000589028	GOLGA6L22	H0YM25	854 aa		7.99	□□□□□ -1.13
ERC1-222	ENST00000589028	MEX3C	Q5U5Q3	659 aa	Known RBP	7.98	□□□□□ -1.13
ERC1-222	ENST00000589028	HNRNPUL2	Q1KMD3	747 aa	Known RBP	7.98	□□□□□ -1.13
ERC1-222	ENST00000589028	SET	Q01105	290 aa	Predicted RBP	7.96	□□□□□ -1.14
ERC1-222	ENST00000589028	STK11IP	Q8N1F8	1099 aa		7.95	□□□□□ -1.14
ERC1-222	ENST00000589028	PLPPR3	Q6T4P5	718 aa		7.94	□□□□□ -1.14
ERC1-222	ENST00000589028	BECN1	Q14457	450 aa		7.93	□□□□□ -1.14
ERC1-222	ENST00000589028	ZNF771	Q7L3S4	317 aa	Predicted RBP	7.93	□□□□□ -1.14
ERC1-222	ENST00000589028	HSP90B1	P14625	803 aa	Known RBP	7.93	□□□□□ -1.14
ERC1-222	ENST00000589028	GOLGA6L6	A8MZA4	724 aa		7.93	□□□□□ -1.14
ERC1-222	ENST00000589028	SCRIB	Q14160	1630 aa		7.93	□□□□□ -1.14
ERC1-222	ENST00000589028	RBM19	Q9Y4C8	960 aa	Known RBP	7.91	□□□□□ -1.14
ERC1-222	ENST00000589028	BRD2	P25440	801 aa	Known RBP	7.91	□□□□□ -1.14
ERC1-222	ENST00000589028	GOLGA6L1	Q8N7Z2	621 aa		7.91	□□□□□ -1.14
ERC1-222	ENST00000589028	NEFH	P12036	1026 aa		7.9	□□□□□ -1.14
ERC1-222	ENST00000589028	MAPK8IP2	Q13387	824 aa	Predicted RBP	7.9	□□□□□ -1.15
ERC1-222	ENST00000589028	SUPT16H	Q9Y5B9	1047 aa	Known RBP	7.89	□□□□□ -1.15
ERC1-222	ENST00000589028	GOLGA6L3	A6NEY3	463 aa		7.88	□□□□□ -1.15
ERC1-222	ENST00000589028	KLHL34	Q8N239	644 aa		7.88	□□□□□ -1.15
ERC1-222	ENST00000589028	IRX6	P78412	446 aa	Predicted RBP	7.88	□□□□□ -1.15
ERC1-222	ENST00000589028	BBX	Q8WY36	941 aa	Predicted RBP	7.88	□□□□□ -1.15
ERC1-222	ENST00000589028	WWC1	Q8IX03	1113 aa		7.88	□□□□□ -1.15
ERC1-222	ENST00000589028	ZBTB7C	A1YPR0	619 aa		7.87	□□□□□ -1.15
ERC1-222	ENST00000589028	ZMYND15	Q9H091	742 aa		7.86	□□□□□ -1.15
ERC1-222	ENST00000589028	BCL11B	Q9C0K0	894 aa	Predicted RBP	7.86	□□□□□ -1.15
ERC1-222	ENST00000589028	OS9	Q13438	667 aa	Predicted RBP	7.86	□□□□□ -1.15
ERC1-222	ENST00000589028	AEBP1	Q8IUX7	1158 aa		7.86	□□□□□ -1.15
ERC1-222	ENST00000589028	CC2D1B	Q5T0F9	858 aa	Known RBP	7.84	□□□□□ -1.15
ERC1-222	ENST00000589028	ZRSR1	Q15695	479 aa	Known RBP	7.83	□□□□□ -1.16
ERC1-222	ENST00000589028	HNRNPU	Q00839	825 aa	Known RBP eCLIP	7.83	□□□□□ -1.16
ERC1-222	ENST00000589028	RBM10	P98175	930 aa	Known RBP	7.82	□□□□□ -1.16
ERC1-222	ENST00000589028	NOM1	Q5C9Z4	860 aa	Known RBP	7.82	□□□□□ -1.16
ERC1-222	ENST00000589028	FAM13B	Q9NYF5	915 aa		7.82	□□□□□ -1.16
ERC1-222	ENST00000589028	IRX3	P78415	501 aa	Predicted RBP	7.82	□□□□□ -1.16
ERC1-222	ENST00000589028	DHX37	Q8IY37	1157 aa	Known RBP	7.82	□□□□□ -1.16
ERC1-222	ENST00000589028	TSHZ2	Q9NRE2	1034 aa		7.82	□□□□□ -1.16
ERC1-222	ENST00000589028	RRP9	O43818	475 aa	Known RBP	7.81	□□□□□ -1.16
ERC1-222	ENST00000589028	TAF3	Q5VWG9	929 aa		7.81	□□□□□ -1.16
ERC1-222	ENST00000589028	FAM50A	Q14320	339 aa	Known RBP	7.81	□□□□□ -1.16
ERC1-222	ENST00000589028	TRIM52	Q96A61	297 aa		7.81	□□□□□ -1.16
ERC1-222	ENST00000589028	PSMD1	Q99460	953 aa		7.8	□□□□□ -1.16
ERC1-222	ENST00000589028	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	7.8	□□□□□ -1.16
ERC1-222	ENST00000589028	CFAP44	Q96MT7	982 aa		7.8	□□□□□ -1.16
ERC1-222	ENST00000589028	CCDC66	A2RUB6	948 aa		7.79	□□□□□ -1.16
ERC1-222	ENST00000589028	PLCB2	Q00722	1185 aa		7.79	□□□□□ -1.16
ERC1-222	ENST00000589028	NAP1L2	Q9ULW6	460 aa	Predicted RBP	7.79	□□□□□ -1.16
ERC1-222	ENST00000589028	KIAA2012	Q0VF49	1180 aa		7.78	□□□□□ -1.16
ERC1-222	ENST00000589028	MYO15B	Q96JP2	1530 aa		7.78	□□□□□ -1.16
ERC1-222	ENST00000589028	MAP7D2	Q96T17	732 aa		7.78	□□□□□ -1.16
ERC1-222	ENST00000589028	MIER1	Q8N108	512 aa		7.77	□□□□□ -1.16
ERC1-222	ENST00000589028	MTERF4	Q7Z6M4	381 aa	Known RBP	7.77	□□□□□ -1.17
ERC1-222	ENST00000589028	NRDC	O43847	1150 aa		7.76	□□□□□ -1.17
ERC1-222	ENST00000589028	ABCC9	O60706	1549 aa		7.75	□□□□□ -1.17
ERC1-222	ENST00000589028		E9PSI1	815 aa		7.75	□□□□□ -1.17
ERC1-222	ENST00000589028	CHMP4A	Q9BY43	222 aa		7.75	□□□□□ -1.17
ERC1-222	ENST00000589028	PLCD4	Q9BRC7	762 aa		7.75	□□□□□ -1.17
ERC1-222	ENST00000589028	IL27	Q8NEV9	243 aa		7.74	□□□□□ -1.17
ERC1-222	ENST00000589028	GZF1	Q9H116	711 aa	Predicted RBP	7.74	□□□□□ -1.17
ERC1-222	ENST00000589028	PLCD3	Q8N3E9	789 aa		7.73	□□□□□ -1.17
ERC1-222	ENST00000589028	GSE1	Q14687	1217 aa		7.73	□□□□□ -1.17
ERC1-222	ENST00000589028	MYH16	Q9H6N6	1097 aa		7.73	□□□□□ -1.17
ERC1-222	ENST00000589028	SSR1	P43307	286 aa	Known RBP	7.73	□□□□□ -1.17
ERC1-222	ENST00000589028	EEA1	Q15075	1411 aa		7.73	□□□□□ -1.17
ERC1-222	ENST00000589028	TEX35	Q5T0J7	233 aa		7.72	□□□□□ -1.17
ERC1-222	ENST00000589028	RB1CC1	Q8TDY2	1594 aa		7.72	□□□□□ -1.17
ERC1-222	ENST00000589028	CHMP4B	Q9H444	224 aa	Known RBP	7.72	□□□□□ -1.17
ERC1-222	ENST00000589028	NOC3L	Q8WTT2	800 aa	Known RBP	7.71	□□□□□ -1.17
ERC1-222	ENST00000589028	DRC7	Q8IY82	874 aa		7.71	□□□□□ -1.18
ERC1-222	ENST00000589028	RBM25	P49756	843 aa	Known RBP	7.71	□□□□□ -1.18
ERC1-222	ENST00000589028	FGD1	P98174	961 aa		7.71	□□□□□ -1.18
ERC1-222	ENST00000589028	TPM2	P07951	284 aa		7.71	□□□□□ -1.18
ERC1-222	ENST00000589028	CWC15	Q9P013	229 aa	Known RBP	7.7	□□□□□ -1.18
ERC1-222	ENST00000589028	RDX	P35241	583 aa	Known RBP	7.7	□□□□□ -1.18
ERC1-222	ENST00000589028	TONSL	Q96HA7	1378 aa		7.7	□□□□□ -1.18
ERC1-222	ENST00000589028	TNNT1	P13805	278 aa		7.7	□□□□□ -1.18
ERC1-222	ENST00000589028	AXDND1	Q5T1B0	1012 aa	Predicted RBP	7.7	□□□□□ -1.18
ERC1-222	ENST00000589028	ESF1	Q9H501	851 aa	Known RBP	7.69	□□□□□ -1.18
ERC1-222	ENST00000589028	GOLGA3	Q08378	1498 aa		7.69	□□□□□ -1.18
ERC1-222	ENST00000589028	FAM193A	P78312	1265 aa		7.69	□□□□□ -1.18
ERC1-222	ENST00000589028	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	7.69	□□□□□ -1.18
ERC1-222	ENST00000589028	HSP90AB3P	Q58FF7	597 aa		7.69	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms