RNA–Protein interactions for RNA: ENST00000588861.1

HDHD2-206, Transcript of haloacid dehalogenase like hydrolase domain containing 2, humanhuman

Gene HDHD2, Length 3,229 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD2-206ENST00000588861 B4GALNT3Q6L9W6 998 aa12.86□□□□□ -0.35
HDHD2-206ENST00000588861 ATAD2BQ9ULI0 1458 aa12.86□□□□□ -0.35
HDHD2-206ENST00000588861 HNRNPUQ00839 825 aaKnown RBP eCLIP12.85□□□□□ -0.35
HDHD2-206ENST00000588861 NCBP3Q53F19 620 aaKnown RBP12.85□□□□□ -0.35
HDHD2-206ENST00000588861 CUX2O14529 1486 aa12.83□□□□□ -0.36
HDHD2-206ENST00000588861 TIMELESSQ9UNS1 1208 aa12.83□□□□□ -0.36
HDHD2-206ENST00000588861 CECR2Q9BXF3 1484 aa12.83□□□□□ -0.36
HDHD2-206ENST00000588861 CCER2I3L3R5 266 aa12.83□□□□□ -0.36
HDHD2-206ENST00000588861 IPO9Q96P70 1041 aaKnown RBP12.82□□□□□ -0.36
HDHD2-206ENST00000588861 HIRIP3Q9BW71 556 aaPredicted RBP12.82□□□□□ -0.36
HDHD2-206ENST00000588861 RANGAP1P46060 587 aaPredicted RBP12.81□□□□□ -0.36
HDHD2-206ENST00000588861 NEFMP07197 916 aa12.79□□□□□ -0.36
HDHD2-206ENST00000588861 BRPF3Q9ULD4 1205 aa12.79□□□□□ -0.36
HDHD2-206ENST00000588861 LAS1LQ9Y4W2 734 aaKnown RBP12.78□□□□□ -0.36
HDHD2-206ENST00000588861 TOP2AP11388 1531 aaKnown RBP12.78□□□□□ -0.36
HDHD2-206ENST00000588861 PLEKHG5O94827 1062 aa12.77□□□□□ -0.36
HDHD2-206ENST00000588861 ABCC8Q09428 1581 aa12.77□□□□□ -0.37
HDHD2-206ENST00000588861 SOGA1O94964 1423 aa12.76□□□□□ -0.37
HDHD2-206ENST00000588861 GLIPR1L2Q4G1C9 344 aa12.76□□□□□ -0.37
HDHD2-206ENST00000588861 PPP1R15AO75807 674 aaPredicted RBP12.75□□□□□ -0.37
HDHD2-206ENST00000588861 NPM2Q86SE8 214 aaKnown RBP12.75□□□□□ -0.37
HDHD2-206ENST00000588861 PODXL2Q9NZ53 605 aa12.75□□□□□ -0.37
HDHD2-206ENST00000588861 THOC2Q8NI27 1593 aaKnown RBP12.74□□□□□ -0.37
HDHD2-206ENST00000588861 CCDC88BA6NC98 1476 aa12.74□□□□□ -0.37
HDHD2-206ENST00000588861 WASHC2AQ641Q2 1341 aa12.73□□□□□ -0.37
HDHD2-206ENST00000588861 VSIG10Q8N0Z9 540 aa12.71□□□□□ -0.37
HDHD2-206ENST00000588861 C11orf95C9JLR9 678 aaPredicted RBP12.71□□□□□ -0.38
HDHD2-206ENST00000588861 GOLGA3Q08378 1498 aa12.7□□□□□ -0.38
HDHD2-206ENST00000588861 RSPH6AQ9H0K4 717 aa12.69□□□□□ -0.38
HDHD2-206ENST00000588861 CLIP1P30622 1438 aa12.68□□□□□ -0.38
HDHD2-206ENST00000588861 USP35Q9P2H5 1018 aa12.67□□□□□ -0.38
HDHD2-206ENST00000588861 ZMYND15Q9H091 742 aa12.67□□□□□ -0.38
HDHD2-206ENST00000588861 WASHC2CQ9Y4E1 1318 aa12.66□□□□□ -0.38
HDHD2-206ENST00000588861 RUSC2Q8N2Y8 1516 aa12.66□□□□□ -0.38
HDHD2-206ENST00000588861 VPS8Q8N3P4 1428 aa12.65□□□□□ -0.38
HDHD2-206ENST00000588861 WDR62O43379 1518 aa12.65□□□□□ -0.38
HDHD2-206ENST00000588861 SIN3AQ96ST3 1273 aa12.64□□□□□ -0.39
HDHD2-206ENST00000588861 PPM1GO15355 546 aaPredicted RBP12.62□□□□□ -0.39
HDHD2-206ENST00000588861 GSE1Q14687 1217 aa12.62□□□□□ -0.39
HDHD2-206ENST00000588861 MROH2BQ7Z745 1585 aa12.62□□□□□ -0.39
HDHD2-206ENST00000588861 EEA1Q15075 1411 aa12.61□□□□□ -0.39
HDHD2-206ENST00000588861 BAZ1BQ9UIG0 1483 aaKnown RBP12.61□□□□□ -0.39
HDHD2-206ENST00000588861 FAM9BQ8IZU0 186 aa12.57□□□□□ -0.4
HDHD2-206ENST00000588861 FRAT1Q92837 279 aaPredicted RBP12.56□□□□□ -0.4
HDHD2-206ENST00000588861 DNAJC5BQ9UF47 199 aa12.56□□□□□ -0.4
HDHD2-206ENST00000588861 WIZO95785 1651 aa12.55□□□□□ -0.4
HDHD2-206ENST00000588861 AMER1Q5JTC6 1135 aaPredicted RBP12.55□□□□□ -0.4
HDHD2-206ENST00000588861 CFTRP13569 1480 aa12.54□□□□□ -0.4
HDHD2-206ENST00000588861 FAM43AQ8N2R8 423 aa12.54□□□□□ -0.4
HDHD2-206ENST00000588861 KANK4Q5T7N3 995 aaPredicted RBP12.53□□□□□ -0.4
HDHD2-206ENST00000588861 RAB3GAP2Q9H2M9 1393 aa12.52□□□□□ -0.4
HDHD2-206ENST00000588861 CEP164Q9UPV0 1460 aa12.5□□□□□ -0.41
HDHD2-206ENST00000588861 HSP90AA2PQ14568 343 aaPredicted RBP12.49□□□□□ -0.41
HDHD2-206ENST00000588861 NFKBIBQ15653 356 aa12.49□□□□□ -0.41
HDHD2-206ENST00000588861 KIF21AQ7Z4S6 1674 aa12.49□□□□□ -0.41
HDHD2-206ENST00000588861 MAPKBP1O60336 1514 aa12.48□□□□□ -0.41
HDHD2-206ENST00000588861 NAP1L5Q96NT1 182 aaPredicted RBP12.48□□□□□ -0.41
HDHD2-206ENST00000588861 A0A0U1RQG5 324 aaPredicted RBP12.47□□□□□ -0.41
HDHD2-206ENST00000588861 CCDC184Q52MB2 194 aa12.47□□□□□ -0.41
HDHD2-206ENST00000588861 CCNB3Q8WWL7 1395 aa12.46□□□□□ -0.41
HDHD2-206ENST00000588861 MRS2Q9HD23 443 aa12.46□□□□□ -0.41
HDHD2-206ENST00000588861 PDE4AP27815 886 aa12.45□□□□□ -0.42
HDHD2-206ENST00000588861 PABPN1Q86U42 306 aaKnown RBP eCLIP12.45□□□□□ -0.42
HDHD2-206ENST00000588861 ZBED9Q6R2W3 1325 aa12.44□□□□□ -0.42
HDHD2-206ENST00000588861 HSP90AA1P07900 732 aaKnown RBP12.43□□□□□ -0.42
HDHD2-206ENST00000588861 AKNAQ7Z591 1439 aa12.43□□□□□ -0.42
HDHD2-206ENST00000588861 KIF21BO75037 1637 aa12.43□□□□□ -0.42
HDHD2-206ENST00000588861 SLC4A3P48751 1232 aa12.43□□□□□ -0.42
HDHD2-206ENST00000588861 DCAF11Q8TEB1 546 aa12.43□□□□□ -0.42
HDHD2-206ENST00000588861 RRBP1Q9P2E9 1410 aaKnown RBP12.42□□□□□ -0.42
HDHD2-206ENST00000588861 DDRGK1Q96HY6 314 aa12.42□□□□□ -0.42
HDHD2-206ENST00000588861 MRC2Q9UBG0 1479 aa12.42□□□□□ -0.42
HDHD2-206ENST00000588861 PDS5BQ9NTI5 1447 aa12.41□□□□□ -0.42
HDHD2-206ENST00000588861 SENP3-EIF4A1A0A087X0R7 540 aa12.41□□□□□ -0.42
HDHD2-206ENST00000588861 TCERG1O14776 1098 aaKnown RBP12.41□□□□□ -0.42
HDHD2-206ENST00000588861 TONSLQ96HA7 1378 aa12.4□□□□□ -0.42
HDHD2-206ENST00000588861 CNGB1Q14028 1251 aaPredicted RBP12.39□□□□□ -0.43
HDHD2-206ENST00000588861 SETD5Q9C0A6 1442 aa12.39□□□□□ -0.43
HDHD2-206ENST00000588861 RRAGDQ9NQL2 400 aaPredicted RBP12.39□□□□□ -0.43
HDHD2-206ENST00000588861 RRP9O43818 475 aaKnown RBP12.38□□□□□ -0.43
HDHD2-206ENST00000588861 BACH2Q9BYV9 841 aa12.38□□□□□ -0.43
HDHD2-206ENST00000588861 CADPSQ9ULU8 1353 aa12.37□□□□□ -0.43
HDHD2-206ENST00000588861 FAM50AQ14320 339 aaKnown RBP12.36□□□□□ -0.43
HDHD2-206ENST00000588861 PNNQ9H307 717 aaKnown RBP12.36□□□□□ -0.43
HDHD2-206ENST00000588861 RAPGEF2Q9Y4G8 1499 aa12.36□□□□□ -0.43
HDHD2-206ENST00000588861 FRAT2O75474 233 aaPredicted RBP12.36□□□□□ -0.43
HDHD2-206ENST00000588861 ARXQ96QS3 562 aa12.36□□□□□ -0.43
HDHD2-206ENST00000588861 BIVM-ERCC5R4GMW8 1640 aa12.35□□□□□ -0.43
HDHD2-206ENST00000588861 KCNA4P22459 653 aa12.35□□□□□ -0.43
HDHD2-206ENST00000588861 NUDCQ9Y266 331 aa12.35□□□□□ -0.43
HDHD2-206ENST00000588861 DNMBPQ6XZF7 1577 aa12.35□□□□□ -0.43
HDHD2-206ENST00000588861 RBM10P98175 930 aaKnown RBP12.34□□□□□ -0.43
HDHD2-206ENST00000588861 ARID4BQ4LE39 1312 aaPredicted RBP12.33□□□□□ -0.44
HDHD2-206ENST00000588861 PRKRIP1Q9H875 184 aaPredicted RBP12.32□□□□□ -0.44
HDHD2-206ENST00000588861 SMG6Q86US8 1419 aaKnown RBP12.3□□□□□ -0.44
HDHD2-206ENST00000588861 MS4A1P11836 297 aa12.3□□□□□ -0.44
HDHD2-206ENST00000588861 EXOC6Q8TAG9 804 aa12.3□□□□□ -0.44
HDHD2-206ENST00000588861 HSPA5P11021 654 aaKnown RBP12.29□□□□□ -0.44
HDHD2-206ENST00000588861 TARBP1Q13395 1621 aaKnown RBP12.27□□□□□ -0.44
HDHD2-206ENST00000588861 L1TD1Q5T7N2 865 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms