RNA–Protein interactions for RNA: ENST00000588770.5

LAMA3-210, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 4,921 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-210ENST00000588770 TNNT2P45379 298 aaPredicted RBP10.56□□□□□ -0.72
LAMA3-210ENST00000588770 PPM1GO15355 546 aaPredicted RBP10.55□□□□□ -0.72
LAMA3-210ENST00000588770 UBTFP17480 764 aaKnown RBP10.55□□□□□ -0.72
LAMA3-210ENST00000588770 HOMEZQ8IX15 550 aa10.55□□□□□ -0.72
LAMA3-210ENST00000588770 BRPF3Q9ULD4 1205 aa10.55□□□□□ -0.72
LAMA3-210ENST00000588770 BBXQ8WY36 941 aaPredicted RBP10.53□□□□□ -0.72
LAMA3-210ENST00000588770 USP35Q9P2H5 1018 aa10.53□□□□□ -0.72
LAMA3-210ENST00000588770 LAS1LQ9Y4W2 734 aaKnown RBP10.52□□□□□ -0.73
LAMA3-210ENST00000588770 NPM2Q86SE8 214 aaKnown RBP10.52□□□□□ -0.73
LAMA3-210ENST00000588770 CDK11BP21127 795 aaKnown RBP10.51□□□□□ -0.73
LAMA3-210ENST00000588770 NAP1L2Q9ULW6 460 aaPredicted RBP10.51□□□□□ -0.73
LAMA3-210ENST00000588770 TULP1O00294 542 aaPredicted RBP10.51□□□□□ -0.73
LAMA3-210ENST00000588770 PNNQ9H307 717 aaKnown RBP10.51□□□□□ -0.73
LAMA3-210ENST00000588770 BRD2P25440 801 aaKnown RBP10.5□□□□□ -0.73
LAMA3-210ENST00000588770 FAM43AQ8N2R8 423 aa10.49□□□□□ -0.73
LAMA3-210ENST00000588770 DHX37Q8IY37 1157 aaKnown RBP10.49□□□□□ -0.73
LAMA3-210ENST00000588770 IPO9Q96P70 1041 aaKnown RBP10.47□□□□□ -0.73
LAMA3-210ENST00000588770 GSE1Q14687 1217 aa10.45□□□□□ -0.74
LAMA3-210ENST00000588770 IRX6P78412 446 aaPredicted RBP10.45□□□□□ -0.74
LAMA3-210ENST00000588770 ARID4BQ4LE39 1312 aaPredicted RBP10.45□□□□□ -0.74
LAMA3-210ENST00000588770 C11orf95C9JLR9 678 aaPredicted RBP10.44□□□□□ -0.74
LAMA3-210ENST00000588770 PAK3O75914 559 aaPredicted RBP10.44□□□□□ -0.74
LAMA3-210ENST00000588770 CHMP4BQ9H444 224 aaKnown RBP10.44□□□□□ -0.74
LAMA3-210ENST00000588770 AMER1Q5JTC6 1135 aaPredicted RBP10.43□□□□□ -0.74
LAMA3-210ENST00000588770 C14orf37Q86TY3 774 aa10.43□□□□□ -0.74
LAMA3-210ENST00000588770 CHMP4AQ9BY43 222 aa10.43□□□□□ -0.74
LAMA3-210ENST00000588770 TRIM52Q96A61 297 aa10.42□□□□□ -0.74
LAMA3-210ENST00000588770 PPP4R2Q9NY27 417 aa10.4□□□□□ -0.74
LAMA3-210ENST00000588770 PLPPR3Q6T4P5 718 aa10.39□□□□□ -0.75
LAMA3-210ENST00000588770 ANP32CO43423 234 aa10.38□□□□□ -0.75
LAMA3-210ENST00000588770 TRIM44Q96DX7 344 aaPredicted RBP10.37□□□□□ -0.75
LAMA3-210ENST00000588770 RGS3P49796 1198 aa10.37□□□□□ -0.75
LAMA3-210ENST00000588770 IPO4Q8TEX9 1081 aaKnown RBP10.34□□□□□ -0.75
LAMA3-210ENST00000588770 ANP32BQ92688 251 aaKnown RBP10.33□□□□□ -0.76
LAMA3-210ENST00000588770 CALD1Q05682 793 aaKnown RBP10.32□□□□□ -0.76
LAMA3-210ENST00000588770 L1TD1Q5T7N2 865 aaKnown RBP10.32□□□□□ -0.76
LAMA3-210ENST00000588770 DDRGK1Q96HY6 314 aa10.31□□□□□ -0.76
LAMA3-210ENST00000588770 PTMSP20962 102 aa10.31□□□□□ -0.76
LAMA3-210ENST00000588770 HNRNPUQ00839 825 aaKnown RBP eCLIP10.29□□□□□ -0.76
LAMA3-210ENST00000588770 DNTTIP2Q5QJE6 756 aaKnown RBP10.29□□□□□ -0.76
LAMA3-210ENST00000588770 B4GALNT3Q6L9W6 998 aa10.29□□□□□ -0.76
LAMA3-210ENST00000588770 RSPH4AQ5TD94 716 aa10.29□□□□□ -0.76
LAMA3-210ENST00000588770 WASHC2CQ9Y4E1 1318 aa10.29□□□□□ -0.76
LAMA3-210ENST00000588770 PLCD3Q8N3E9 789 aa10.29□□□□□ -0.76
LAMA3-210ENST00000588770 APPP05067 770 aa10.29□□□□□ -0.76
LAMA3-210ENST00000588770 PDCL3Q9H2J4 239 aa10.29□□□□□ -0.76
LAMA3-210ENST00000588770 DDX10Q13206 875 aaKnown RBP10.28□□□□□ -0.76
LAMA3-210ENST00000588770 FRAT1Q92837 279 aaPredicted RBP10.28□□□□□ -0.76
LAMA3-210ENST00000588770 WASHC2AQ641Q2 1341 aa10.28□□□□□ -0.76
LAMA3-210ENST00000588770 FTSJ3Q8IY81 847 aaKnown RBP10.27□□□□□ -0.77
LAMA3-210ENST00000588770 CALRP27797 417 aaKnown RBP10.25□□□□□ -0.77
LAMA3-210ENST00000588770 TPM2P07951 284 aa10.24□□□□□ -0.77
LAMA3-210ENST00000588770 HSP90B1P14625 803 aaKnown RBP10.23□□□□□ -0.77
LAMA3-210ENST00000588770 ZFP91Q96JP5 570 aaPredicted RBP10.23□□□□□ -0.77
LAMA3-210ENST00000588770 MAP7D2Q96T17 732 aa10.23□□□□□ -0.77
LAMA3-210ENST00000588770 ARID3AQ99856 593 aa10.23□□□□□ -0.77
LAMA3-210ENST00000588770 ATP1B4Q9UN42 357 aaPredicted RBP10.22□□□□□ -0.77
LAMA3-210ENST00000588770 ZHX1Q9UKY1 873 aaPredicted RBP10.22□□□□□ -0.77
LAMA3-210ENST00000588770 BCCIPQ9P287 314 aaKnown RBP eCLIP10.21□□□□□ -0.78
LAMA3-210ENST00000588770 PATL2C9JE40 543 aaKnown RBP10.2□□□□□ -0.78
LAMA3-210ENST00000588770 KCNH8Q96L42 1107 aa10.2□□□□□ -0.78
LAMA3-210ENST00000588770 IRX3P78415 501 aaPredicted RBP10.17□□□□□ -0.78
LAMA3-210ENST00000588770 NFKBIBQ15653 356 aa10.17□□□□□ -0.78
LAMA3-210ENST00000588770 WWC1Q8IX03 1113 aa10.16□□□□□ -0.78
LAMA3-210ENST00000588770 GTF2E1P29083 439 aaPredicted RBP10.16□□□□□ -0.78
LAMA3-210ENST00000588770 FAM13BQ9NYF5 915 aa10.16□□□□□ -0.78
LAMA3-210ENST00000588770 STAC3Q96MF2 364 aa10.15□□□□□ -0.78
LAMA3-210ENST00000588770 VGLL3A8MV65 326 aa10.15□□□□□ -0.78
LAMA3-210ENST00000588770 SAMD1Q6SPF0 538 aaPredicted RBP10.14□□□□□ -0.79
LAMA3-210ENST00000588770 TEX2Q8IWB9 1127 aa10.14□□□□□ -0.79
LAMA3-210ENST00000588770 PTMAP06454 111 aaKnown RBP10.13□□□□□ -0.79
LAMA3-210ENST00000588770 SECISBP2LQ93073 1101 aaKnown RBP10.12□□□□□ -0.79
LAMA3-210ENST00000588770 MTERF4Q7Z6M4 381 aaKnown RBP10.12□□□□□ -0.79
LAMA3-210ENST00000588770 FAM9BQ8IZU0 186 aa10.12□□□□□ -0.79
LAMA3-210ENST00000588770 MAPK8IP2Q13387 824 aaPredicted RBP10.11□□□□□ -0.79
LAMA3-210ENST00000588770 CNPY4Q8N129 248 aa10.11□□□□□ -0.79
LAMA3-210ENST00000588770 SMAP1Q8IYB5 467 aaPredicted RBP10.11□□□□□ -0.79
LAMA3-210ENST00000588770 RRAGDQ9NQL2 400 aaPredicted RBP10.1□□□□□ -0.79
LAMA3-210ENST00000588770 GOLGA6L3A6NEY3 463 aa10.1□□□□□ -0.79
LAMA3-210ENST00000588770 TAF3Q5VWG9 929 aa10.1□□□□□ -0.79
LAMA3-210ENST00000588770 CLCN1P35523 988 aa10.1□□□□□ -0.79
LAMA3-210ENST00000588770 HIRIP3Q9BW71 556 aaPredicted RBP10.1□□□□□ -0.79
LAMA3-210ENST00000588770 PRDM10Q9NQV6 1147 aa10.09□□□□□ -0.79
LAMA3-210ENST00000588770 CENPJQ9HC77 1338 aaPredicted RBP10.09□□□□□ -0.79
LAMA3-210ENST00000588770 E9PSI1 815 aa10.09□□□□□ -0.79
LAMA3-210ENST00000588770 CCER2I3L3R5 266 aa10.09□□□□□ -0.79
LAMA3-210ENST00000588770 CCDC9Q9Y3X0 531 aaKnown RBP10.09□□□□□ -0.79
LAMA3-210ENST00000588770 AEBP1Q8IUX7 1158 aa10.08□□□□□ -0.8
LAMA3-210ENST00000588770 CLGNO14967 610 aa10.07□□□□□ -0.8
LAMA3-210ENST00000588770 TNNT3P45378 269 aaPredicted RBP10.07□□□□□ -0.8
LAMA3-210ENST00000588770 MSNP26038 577 aaKnown RBP10.07□□□□□ -0.8
LAMA3-210ENST00000588770 PRDM4Q9UKN5 801 aa10.06□□□□□ -0.8
LAMA3-210ENST00000588770 PPP4R3BQ5MIZ7 849 aa10.06□□□□□ -0.8
LAMA3-210ENST00000588770 MYH16Q9H6N6 1097 aa10.06□□□□□ -0.8
LAMA3-210ENST00000588770 FAM193AP78312 1265 aa10.06□□□□□ -0.8
LAMA3-210ENST00000588770 HMGB1P09429 215 aaKnown RBP10.05□□□□□ -0.8
LAMA3-210ENST00000588770 TCERG1O14776 1098 aaKnown RBP10.04□□□□□ -0.8
LAMA3-210ENST00000588770 KIAA1211Q6ZU35 1233 aa10.04□□□□□ -0.8
LAMA3-210ENST00000588770 CNKSR2Q8WXI2 1034 aa10.02□□□□□ -0.81
LAMA3-210ENST00000588770 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms