RNA–Protein interactions for RNA: ENST00000587440.1

LDLRAD4-209, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 3

Gene LDLRAD4, Length 335 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-209ENST00000587440 NUBP1P53384 320 aa7.35□□□□□ -1.23
LDLRAD4-209ENST00000587440 HAP1P54257 671 aaPredicted RBP7.33□□□□□ -1.24
LDLRAD4-209ENST00000587440 PITPNM1O00562 1244 aa7.32□□□□□ -1.24
LDLRAD4-209ENST00000587440 EIF4G1Q04637 1599 aaKnown RBP7.32□□□□□ -1.24
LDLRAD4-209ENST00000587440 PLEKHG5O94827 1062 aa7.31□□□□□ -1.24
LDLRAD4-209ENST00000587440 RNF25Q96BH1 459 aaPredicted RBP7.31□□□□□ -1.24
LDLRAD4-209ENST00000587440 CLEC11AQ9Y240 323 aa7.3□□□□□ -1.24
LDLRAD4-209ENST00000587440 ERCC6Q03468 1493 aa7.3□□□□□ -1.24
LDLRAD4-209ENST00000587440 CIZ1Q9ULV3 898 aaPredicted RBP7.29□□□□□ -1.24
LDLRAD4-209ENST00000587440 PRR29P0C7W0 189 aa7.28□□□□□ -1.24
LDLRAD4-209ENST00000587440 BBXQ8WY36 941 aaPredicted RBP7.27□□□□□ -1.25
LDLRAD4-209ENST00000587440 RASEFQ8IZ41 740 aa7.25□□□□□ -1.25
LDLRAD4-209ENST00000587440 GSE1Q14687 1217 aa7.24□□□□□ -1.25
LDLRAD4-209ENST00000587440 HS6ST3Q8IZP7 471 aa7.22□□□□□ -1.25
LDLRAD4-209ENST00000587440 PAXIP1Q6ZW49 1069 aaPredicted RBP7.21□□□□□ -1.26
LDLRAD4-209ENST00000587440 VSIG10Q8N0Z9 540 aa7.21□□□□□ -1.26
LDLRAD4-209ENST00000587440 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.21□□□□□ -1.26
LDLRAD4-209ENST00000587440 KDM2AQ9Y2K7 1162 aa7.21□□□□□ -1.26
LDLRAD4-209ENST00000587440 CHGAP10645 457 aaKnown RBP7.19□□□□□ -1.26
LDLRAD4-209ENST00000587440 CHRM1P11229 460 aaPredicted RBP7.19□□□□□ -1.26
LDLRAD4-209ENST00000587440 FAM212AQ96EL1 285 aa7.19□□□□□ -1.26
LDLRAD4-209ENST00000587440 CFAP44Q96MT7 982 aa7.19□□□□□ -1.26
LDLRAD4-209ENST00000587440 DCAF8Q5TAQ9 597 aa7.18□□□□□ -1.26
LDLRAD4-209ENST00000587440 CHRDL2Q6WN34 429 aa7.18□□□□□ -1.26
LDLRAD4-209ENST00000587440 RIOK3O14730 519 aaKnown RBP7.17□□□□□ -1.26
LDLRAD4-209ENST00000587440 CHADLQ6NUI6 762 aa7.17□□□□□ -1.26
LDLRAD4-209ENST00000587440 NKX1-1Q15270 411 aaPredicted RBP7.16□□□□□ -1.26
LDLRAD4-209ENST00000587440 SPRYD3Q8NCJ5 442 aa7.14□□□□□ -1.27
LDLRAD4-209ENST00000587440 FXR2P51116 673 aaKnown RBP eCLIP7.13□□□□□ -1.27
LDLRAD4-209ENST00000587440 BCANQ96GW7 911 aa7.13□□□□□ -1.27
LDLRAD4-209ENST00000587440 TSHZ2Q9NRE2 1034 aa7.13□□□□□ -1.27
LDLRAD4-209ENST00000587440 SGIP1Q9BQI5 828 aa7.12□□□□□ -1.27
LDLRAD4-209ENST00000587440 FARP1Q9Y4F1 1045 aaPredicted RBP7.12□□□□□ -1.27
LDLRAD4-209ENST00000587440 PYGBP11216 843 aa7.11□□□□□ -1.27
LDLRAD4-209ENST00000587440 VGFO15240 615 aaPredicted RBP7.1□□□□□ -1.27
LDLRAD4-209ENST00000587440 RIMBP3CA6NJZ7 1639 aa7.09□□□□□ -1.27
LDLRAD4-209ENST00000587440 RIMBP3BA6NNM3 1639 aa7.09□□□□□ -1.27
LDLRAD4-209ENST00000587440 RIMBP3Q9UFD9 1639 aa7.09□□□□□ -1.27
LDLRAD4-209ENST00000587440 THOC2Q8NI27 1593 aaKnown RBP7.09□□□□□ -1.27
LDLRAD4-209ENST00000587440 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.08□□□□□ -1.28
LDLRAD4-209ENST00000587440 GTPBP6O43824 516 aaPredicted RBP7.08□□□□□ -1.28
LDLRAD4-209ENST00000587440 PRKAR2AP13861 404 aaKnown RBP7.08□□□□□ -1.28
LDLRAD4-209ENST00000587440 ZFP91Q96JP5 570 aaPredicted RBP7.08□□□□□ -1.28
LDLRAD4-209ENST00000587440 MYO15BQ96JP2 1530 aa7.07□□□□□ -1.28
LDLRAD4-209ENST00000587440 PRKCSHP14314 528 aaPredicted RBP7.07□□□□□ -1.28
LDLRAD4-209ENST00000587440 CCDC61Q9Y6R9 512 aa7.07□□□□□ -1.28
LDLRAD4-209ENST00000587440 BAZ1AQ9NRL2 1556 aaPredicted RBP7.07□□□□□ -1.28
LDLRAD4-209ENST00000587440 STK25O00506 426 aa7.06□□□□□ -1.28
LDLRAD4-209ENST00000587440 SOCS7O14512 581 aa7.06□□□□□ -1.28
LDLRAD4-209ENST00000587440 LMTK3Q96Q04 1460 aa7.05□□□□□ -1.28
LDLRAD4-209ENST00000587440 PIP4P2Q8N4L2 257 aa7.05□□□□□ -1.28
LDLRAD4-209ENST00000587440 BCL11BQ9C0K0 894 aaPredicted RBP7.05□□□□□ -1.28
LDLRAD4-209ENST00000587440 TSPYL2Q9H2G4 693 aaPredicted RBP7.05□□□□□ -1.28
LDLRAD4-209ENST00000587440 TAOK2Q9UL54 1235 aa7.05□□□□□ -1.28
LDLRAD4-209ENST00000587440 STK24Q9Y6E0 443 aa7.01□□□□□ -1.29
LDLRAD4-209ENST00000587440 ZNF467Q7Z7K2 595 aaPredicted RBP7□□□□□ -1.29
LDLRAD4-209ENST00000587440 PCDHB8Q9UN66 801 aa7□□□□□ -1.29
LDLRAD4-209ENST00000587440 PCDHB13Q9Y5F0 798 aa7□□□□□ -1.29
LDLRAD4-209ENST00000587440 ARHGEF11O15085 1522 aa7□□□□□ -1.29
LDLRAD4-209ENST00000587440 SP7Q8TDD2 431 aaPredicted RBP6.99□□□□□ -1.29
LDLRAD4-209ENST00000587440 ZNF579Q8NAF0 562 aaKnown RBP6.98□□□□□ -1.29
LDLRAD4-209ENST00000587440 PDAP1Q13442 181 aaKnown RBP6.97□□□□□ -1.29
LDLRAD4-209ENST00000587440 KIF12Q96FN5 646 aa6.97□□□□□ -1.29
LDLRAD4-209ENST00000587440 TPRNQ4KMQ1 711 aa6.96□□□□□ -1.3
LDLRAD4-209ENST00000587440 IFNL1Q8IU54 200 aa6.96□□□□□ -1.3
LDLRAD4-209ENST00000587440 FBXO41Q8TF61 875 aa6.96□□□□□ -1.3
LDLRAD4-209ENST00000587440 MAP3K13O43283 966 aa6.94□□□□□ -1.3
LDLRAD4-209ENST00000587440 PSEN1P49768 467 aa6.94□□□□□ -1.3
LDLRAD4-209ENST00000587440 ERCC6L2Q5T890 1561 aa6.94□□□□□ -1.3
LDLRAD4-209ENST00000587440 MFRPQ9BY79 579 aa6.93□□□□□ -1.3
LDLRAD4-209ENST00000587440 PHF12Q96QT6 1004 aa6.91□□□□□ -1.3
LDLRAD4-209ENST00000587440 RYDENQ9NUL5 291 aaKnown RBP6.91□□□□□ -1.3
LDLRAD4-209ENST00000587440 PAK3O75914 559 aaPredicted RBP6.9□□□□□ -1.3
LDLRAD4-209ENST00000587440 CD44P16070 742 aaKnown RBP6.9□□□□□ -1.3
LDLRAD4-209ENST00000587440 CYB5RLQ6IPT4 315 aa6.9□□□□□ -1.3
LDLRAD4-209ENST00000587440 CADPS2Q86UW7 1296 aa6.9□□□□□ -1.3
LDLRAD4-209ENST00000587440 FBXO22Q8NEZ5 403 aa6.89□□□□□ -1.31
LDLRAD4-209ENST00000587440 NESP48681 1621 aa6.88□□□□□ -1.31
LDLRAD4-209ENST00000587440 SMARCA2P51531 1590 aa6.88□□□□□ -1.31
LDLRAD4-209ENST00000587440 C19orf67A6NJJ6 358 aa6.88□□□□□ -1.31
LDLRAD4-209ENST00000587440 ZRANB1Q9UGI0 708 aa6.88□□□□□ -1.31
LDLRAD4-209ENST00000587440 HAX1O00165 279 aa6.87□□□□□ -1.31
LDLRAD4-209ENST00000587440 NBR1Q14596 966 aa6.87□□□□□ -1.31
LDLRAD4-209ENST00000587440 EFCAB3Q8N7B9 438 aa6.86□□□□□ -1.31
LDLRAD4-209ENST00000587440 TRPC6Q9Y210 931 aa6.86□□□□□ -1.31
LDLRAD4-209ENST00000587440 PPP1R37O75864 691 aa6.85□□□□□ -1.31
LDLRAD4-209ENST00000587440 ILDR2Q71H61 639 aa6.85□□□□□ -1.31
LDLRAD4-209ENST00000587440 CABP2Q9NPB3 220 aa6.85□□□□□ -1.31
LDLRAD4-209ENST00000587440 ARAP1Q96P48 1450 aa6.85□□□□□ -1.31
LDLRAD4-209ENST00000587440 SCRIBQ14160 1630 aa6.83□□□□□ -1.32
LDLRAD4-209ENST00000587440 MS4A3Q96HJ5 214 aa6.83□□□□□ -1.32
LDLRAD4-209ENST00000587440 MS4A4AQ96JQ5 239 aa6.83□□□□□ -1.32
LDLRAD4-209ENST00000587440 PHF8Q9UPP1 1060 aa6.83□□□□□ -1.32
LDLRAD4-209ENST00000587440 LAMC3Q9Y6N6 1575 aa6.82□□□□□ -1.32
LDLRAD4-209ENST00000587440 NCAPD3P42695 1498 aa6.82□□□□□ -1.32
LDLRAD4-209ENST00000587440 SOX12O15370 315 aa6.82□□□□□ -1.32
LDLRAD4-209ENST00000587440 KIF21AQ7Z4S6 1674 aa6.81□□□□□ -1.32
LDLRAD4-209ENST00000587440 WDR62O43379 1518 aa6.81□□□□□ -1.32
LDLRAD4-209ENST00000587440 NLRP6P59044 892 aa6.8□□□□□ -1.32
LDLRAD4-209ENST00000587440 PDS5BQ9NTI5 1447 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms