RNA–Protein interactions for RNA: ENST00000585739.1

LINC01533-201, Transcript of long intergenic non-protein coding RNA 1533, humanhuman

TSL 5 BASIC

Gene LINC01533, Length 616 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01533-201ENST00000585739 MS4A3Q96HJ5 214 aa12.82□□□□□ -0.36
LINC01533-201ENST00000585739 METRNQ9UJH8 293 aa12.81□□□□□ -0.36
LINC01533-201ENST00000585739 ATMINO43313 823 aaPredicted RBP12.8□□□□□ -0.36
LINC01533-201ENST00000585739 CCDC180Q9P1Z9 1646 aa12.79□□□□□ -0.36
LINC01533-201ENST00000585739 C7P10643 843 aa12.75□□□□□ -0.37
LINC01533-201ENST00000585739 LCE2DQ5TA82 110 aaPredicted RBP12.75□□□□□ -0.37
LINC01533-201ENST00000585739 SLC39A7Q92504 469 aa12.75□□□□□ -0.37
LINC01533-201ENST00000585739 PCDH10Q9P2E7 1040 aa12.71□□□□□ -0.37
LINC01533-201ENST00000585739 ATN1P54259 1190 aaPredicted RBP12.66□□□□□ -0.38
LINC01533-201ENST00000585739 MAMSTRQ6ZN01 415 aa12.66□□□□□ -0.38
LINC01533-201ENST00000585739 CCDC61Q9Y6R9 512 aa12.64□□□□□ -0.39
LINC01533-201ENST00000585739 POTEFA5A3E0 1075 aa12.63□□□□□ -0.39
LINC01533-201ENST00000585739 TSPYL2Q9H2G4 693 aaPredicted RBP12.63□□□□□ -0.39
LINC01533-201ENST00000585739 FAM163AQ96GL9 167 aaPredicted RBP12.61□□□□□ -0.39
LINC01533-201ENST00000585739 KIF12Q96FN5 646 aa12.59□□□□□ -0.39
LINC01533-201ENST00000585739 TRPC6Q9Y210 931 aa12.59□□□□□ -0.39
LINC01533-201ENST00000585739 SCUBE2Q9NQ36 999 aa12.58□□□□□ -0.4
LINC01533-201ENST00000585739 BMP2KQ9NSY1 1161 aaPredicted RBP12.56□□□□□ -0.4
LINC01533-201ENST00000585739 PROM2Q8N271 834 aa12.53□□□□□ -0.4
LINC01533-201ENST00000585739 MAP3K13O43283 966 aa12.48□□□□□ -0.41
LINC01533-201ENST00000585739 COLQQ9Y215 455 aaPredicted RBP12.47□□□□□ -0.41
LINC01533-201ENST00000585739 TIE1P35590 1138 aa12.46□□□□□ -0.41
LINC01533-201ENST00000585739 RASEFQ8IZ41 740 aa12.43□□□□□ -0.42
LINC01533-201ENST00000585739 EHMT2Q96KQ7 1210 aa12.43□□□□□ -0.42
LINC01533-201ENST00000585739 TTLL13PA6NNM8 815 aa12.41□□□□□ -0.42
LINC01533-201ENST00000585739 CDAN1Q8IWY9 1227 aa12.37□□□□□ -0.43
LINC01533-201ENST00000585739 SEC24BO95487 1268 aa12.35□□□□□ -0.43
LINC01533-201ENST00000585739 TRIM35Q9UPQ4 493 aa12.32□□□□□ -0.44
LINC01533-201ENST00000585739 MIER1Q8N108 512 aa12.3□□□□□ -0.44
LINC01533-201ENST00000585739 IER5LQ5T953 404 aa12.29□□□□□ -0.44
LINC01533-201ENST00000585739 ST18O60284 1047 aa12.27□□□□□ -0.45
LINC01533-201ENST00000585739 SGIP1Q9BQI5 828 aa12.26□□□□□ -0.45
LINC01533-201ENST00000585739 PLEKHG5O94827 1062 aa12.25□□□□□ -0.45
LINC01533-201ENST00000585739 SLAIN1Q8ND83 568 aa12.25□□□□□ -0.45
LINC01533-201ENST00000585739 PCDHB13Q9Y5F0 798 aa12.25□□□□□ -0.45
LINC01533-201ENST00000585739 IFNL1Q8IU54 200 aa12.21□□□□□ -0.45
LINC01533-201ENST00000585739 ABCC9O60706 1549 aa12.21□□□□□ -0.46
LINC01533-201ENST00000585739 NUBP1P53384 320 aa12.19□□□□□ -0.46
LINC01533-201ENST00000585739 TMEM106CQ9BVX2 250 aa12.16□□□□□ -0.46
LINC01533-201ENST00000585739 IRX5P78411 483 aaPredicted RBP12.14□□□□□ -0.47
LINC01533-201ENST00000585739 PLCD3Q8N3E9 789 aa12.13□□□□□ -0.47
LINC01533-201ENST00000585739 PLCG2P16885 1265 aa12.12□□□□□ -0.47
LINC01533-201ENST00000585739 MMRN1Q13201 1228 aa12.11□□□□□ -0.47
LINC01533-201ENST00000585739 SPNS2Q8IVW8 549 aa12.1□□□□□ -0.47
LINC01533-201ENST00000585739 TMEM121BQ9BXQ6 578 aaPredicted RBP12.04□□□□□ -0.48
LINC01533-201ENST00000585739 FAM212AQ96EL1 285 aa12.03□□□□□ -0.48
LINC01533-201ENST00000585739 ZBTB47Q9UFB7 747 aaPredicted RBP12.03□□□□□ -0.48
LINC01533-201ENST00000585739 OCEL1Q9H607 264 aa12.02□□□□□ -0.49
LINC01533-201ENST00000585739 MARVELD3Q96A59 401 aa12.01□□□□□ -0.49
LINC01533-201ENST00000585739 ZCCHC6Q5VYS8 1495 aaKnown RBP11.98□□□□□ -0.49
LINC01533-201ENST00000585739 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.97□□□□□ -0.49
LINC01533-201ENST00000585739 SNPHO15079 494 aa11.96□□□□□ -0.49
LINC01533-201ENST00000585739 PYGBP11216 843 aa11.93□□□□□ -0.5
LINC01533-201ENST00000585739 PCDHB8Q9UN66 801 aa11.93□□□□□ -0.5
LINC01533-201ENST00000585739 NACADO15069 1562 aa11.92□□□□□ -0.5
LINC01533-201ENST00000585739 MYO15BQ96JP2 1530 aa11.92□□□□□ -0.5
LINC01533-201ENST00000585739 DCAF1Q9Y4B6 1507 aa11.91□□□□□ -0.5
LINC01533-201ENST00000585739 RB1CC1Q8TDY2 1594 aa11.91□□□□□ -0.5
LINC01533-201ENST00000585739 PDCD7Q8N8D1 485 aaKnown RBP11.9□□□□□ -0.5
LINC01533-201ENST00000585739 POTEB3A0JP26 581 aa11.88□□□□□ -0.51
LINC01533-201ENST00000585739 DCAF8Q5TAQ9 597 aa11.88□□□□□ -0.51
LINC01533-201ENST00000585739 POTEBQ6S5H4 581 aa11.88□□□□□ -0.51
LINC01533-201ENST00000585739 KRTAP3-3Q9BYR6 98 aa11.86□□□□□ -0.51
LINC01533-201ENST00000585739 KRTAP3-2Q9BYR7 98 aa11.86□□□□□ -0.51
LINC01533-201ENST00000585739 EMP3P54852 163 aa11.84□□□□□ -0.51
LINC01533-201ENST00000585739 DCAF8L2P0C7V8 631 aa11.81□□□□□ -0.52
LINC01533-201ENST00000585739 HS3ST6Q96QI5 342 aa11.81□□□□□ -0.52
LINC01533-201ENST00000585739 C3orf67Q6ZVT6 689 aa11.79□□□□□ -0.52
LINC01533-201ENST00000585739 FAM205CA6NFA0 338 aa11.77□□□□□ -0.53
LINC01533-201ENST00000585739 L3MBTL3Q96JM7 780 aaPredicted RBP11.76□□□□□ -0.53
LINC01533-201ENST00000585739 MKRN3Q13064 507 aaKnown RBP11.73□□□□□ -0.53
LINC01533-201ENST00000585739 FKBP8Q14318 412 aa11.71□□□□□ -0.53
LINC01533-201ENST00000585739 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.71□□□□□ -0.53
LINC01533-201ENST00000585739 ZNF467Q7Z7K2 595 aaPredicted RBP11.7□□□□□ -0.54
LINC01533-201ENST00000585739 ILDR1Q86SU0 546 aaPredicted RBP11.7□□□□□ -0.54
LINC01533-201ENST00000585739 UNC13AQ9UPW8 1703 aa11.69□□□□□ -0.54
LINC01533-201ENST00000585739 GOLGA2Q08379 1002 aa11.68□□□□□ -0.54
LINC01533-201ENST00000585739 DPY19L2Q6NUT2 758 aa11.67□□□□□ -0.54
LINC01533-201ENST00000585739 HOXB3P14651 431 aaPredicted RBP11.66□□□□□ -0.54
LINC01533-201ENST00000585739 PSEN1P49768 467 aa11.65□□□□□ -0.54
LINC01533-201ENST00000585739 CHRM1P11229 460 aaPredicted RBP11.64□□□□□ -0.55
LINC01533-201ENST00000585739 GSE1Q14687 1217 aa11.63□□□□□ -0.55
LINC01533-201ENST00000585739 SCRIBQ14160 1630 aa11.58□□□□□ -0.56
LINC01533-201ENST00000585739 HOXB1P14653 301 aaPredicted RBP11.58□□□□□ -0.56
LINC01533-201ENST00000585739 FBXO3Q9UK99 471 aa11.56□□□□□ -0.56
LINC01533-201ENST00000585739 BOLA1Q9Y3E2 137 aa11.56□□□□□ -0.56
LINC01533-201ENST00000585739 KLHL34Q8N239 644 aa11.54□□□□□ -0.56
LINC01533-201ENST00000585739 PDAP1Q13442 181 aaKnown RBP11.53□□□□□ -0.56
LINC01533-201ENST00000585739 CABP2Q9NPB3 220 aa11.52□□□□□ -0.57
LINC01533-201ENST00000585739 VASPP50552 380 aaPredicted RBP11.51□□□□□ -0.57
LINC01533-201ENST00000585739 ERBB3P21860 1342 aa11.51□□□□□ -0.57
LINC01533-201ENST00000585739 ZNF710Q8N1W2 664 aa11.5□□□□□ -0.57
LINC01533-201ENST00000585739 RNF166Q96A37 237 aaPredicted RBP11.5□□□□□ -0.57
LINC01533-201ENST00000585739 BICRAQ9NZM4 1560 aa11.49□□□□□ -0.57
LINC01533-201ENST00000585739 SHROOM4Q9ULL8 1493 aa11.47□□□□□ -0.57
LINC01533-201ENST00000585739 DOK7Q18PE1 504 aa11.47□□□□□ -0.57
LINC01533-201ENST00000585739 G3V3G9 751 aa11.46□□□□□ -0.57
LINC01533-201ENST00000585739 VARS2Q5ST30 1063 aaKnown RBP11.44□□□□□ -0.58
LINC01533-201ENST00000585739 MYT1LQ9UL68 1186 aa11.42□□□□□ -0.58
LINC01533-201ENST00000585739 TMEM92Q6UXU6 159 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms