RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 FAM69CQ0P6D2 419 aa18.82■□□□□ 0.6
CSNK1D-226ENST00000585026 KIF27Q86VH2 1401 aa18.79■□□□□ 0.6
CSNK1D-226ENST00000585026 RUSC2Q8N2Y8 1516 aa18.79■□□□□ 0.6
CSNK1D-226ENST00000585026 KIAA0586Q9BVV6 1533 aa18.78■□□□□ 0.6
CSNK1D-226ENST00000585026 ABCC10Q5T3U5 1492 aa18.77■□□□□ 0.6
CSNK1D-226ENST00000585026 IGF1RP08069 1367 aa18.77■□□□□ 0.6
CSNK1D-226ENST00000585026 MAPKBP1O60336 1514 aa18.74■□□□□ 0.59
CSNK1D-226ENST00000585026 KIF13AQ9H1H9 1805 aa18.72■□□□□ 0.59
CSNK1D-226ENST00000585026 CUL7Q14999 1698 aa18.69■□□□□ 0.58
CSNK1D-226ENST00000585026 PTPRGP23470 1445 aa18.67■□□□□ 0.58
CSNK1D-226ENST00000585026 CARMIL1Q5VZK9 1371 aa18.67■□□□□ 0.58
CSNK1D-226ENST00000585026 ADCY10Q96PN6 1610 aa18.66■□□□□ 0.58
CSNK1D-226ENST00000585026 CARMIL2Q6F5E8 1435 aa18.66■□□□□ 0.58
CSNK1D-226ENST00000585026 DIP2BQ9P265 1576 aa18.64■□□□□ 0.58
CSNK1D-226ENST00000585026 TNIKQ9UKE5 1360 aa18.62■□□□□ 0.57
CSNK1D-226ENST00000585026 TTBK1Q5TCY1 1321 aaPredicted RBP18.61■□□□□ 0.57
CSNK1D-226ENST00000585026 KDM6BO15054 1643 aa18.56■□□□□ 0.56
CSNK1D-226ENST00000585026 ABCC2Q92887 1545 aa18.55■□□□□ 0.56
CSNK1D-226ENST00000585026 PLB1Q6P1J6 1458 aa18.54■□□□□ 0.56
CSNK1D-226ENST00000585026 IQGAP2Q13576 1575 aa18.51■□□□□ 0.55
CSNK1D-226ENST00000585026 ASXL2Q76L83 1435 aa18.5■□□□□ 0.55
CSNK1D-226ENST00000585026 UACAQ9BZF9 1416 aa18.5■□□□□ 0.55
CSNK1D-226ENST00000585026 UHRF1BP1LA0JNW5 1464 aa18.5■□□□□ 0.55
CSNK1D-226ENST00000585026 KDM4FA0A1W2PPD8 638 aa18.49■□□□□ 0.55
CSNK1D-226ENST00000585026 TSPOAP1O95153 1857 aa18.47■□□□□ 0.55
CSNK1D-226ENST00000585026 RAPGEF2Q9Y4G8 1499 aa18.46■□□□□ 0.54
CSNK1D-226ENST00000585026 GLI2P10070 1586 aa18.45■□□□□ 0.54
CSNK1D-226ENST00000585026 DISP1Q96F81 1524 aa18.43■□□□□ 0.54
CSNK1D-226ENST00000585026 UGGT2Q9NYU1 1516 aa18.4■□□□□ 0.54
CSNK1D-226ENST00000585026 KDM5BQ9UGL1 1544 aa18.4■□□□□ 0.54
CSNK1D-226ENST00000585026 TEX14Q8IWB6 1497 aa18.39■□□□□ 0.53
CSNK1D-226ENST00000585026 EPRSP07814 1512 aaKnown RBP18.37■□□□□ 0.53
CSNK1D-226ENST00000585026 FAM9AQ8IZU1 332 aaPredicted RBP18.36■□□□□ 0.53
CSNK1D-226ENST00000585026 KIAA0556O60303 1618 aa18.33■□□□□ 0.52
CSNK1D-226ENST00000585026 GOLGA3Q08378 1498 aa18.33■□□□□ 0.52
CSNK1D-226ENST00000585026 WDR7Q9Y4E6 1490 aa18.3■□□□□ 0.52
CSNK1D-226ENST00000585026 PPRC1Q5VV67 1664 aaKnown RBP18.3■□□□□ 0.52
CSNK1D-226ENST00000585026 ADGRL1O94910 1474 aa18.28■□□□□ 0.52
CSNK1D-226ENST00000585026 ZCCHC11Q5TAX3 1644 aaKnown RBP18.28■□□□□ 0.52
CSNK1D-226ENST00000585026 MAP3K4Q9Y6R4 1608 aa18.28■□□□□ 0.52
CSNK1D-226ENST00000585026 COL17A1Q9UMD9 1497 aaPredicted RBP18.27■□□□□ 0.52
CSNK1D-226ENST00000585026 KCNH8Q96L42 1107 aa18.25■□□□□ 0.51
CSNK1D-226ENST00000585026 CD109Q6YHK3 1445 aa18.24■□□□□ 0.51
CSNK1D-226ENST00000585026 MAGI3Q5TCQ9 1506 aa18.21■□□□□ 0.51
CSNK1D-226ENST00000585026 PRXQ9BXM0 1461 aa18.19■□□□□ 0.5
CSNK1D-226ENST00000585026 CTTNBP2Q8WZ74 1663 aa18.18■□□□□ 0.5
CSNK1D-226ENST00000585026 ABCA8O94911 1581 aa18.18■□□□□ 0.5
CSNK1D-226ENST00000585026 CFAP43Q8NDM7 1665 aa18.14■□□□□ 0.49
CSNK1D-226ENST00000585026 ILDR1Q86SU0 546 aaPredicted RBP18.13■□□□□ 0.49
CSNK1D-226ENST00000585026 P3H3Q8IVL6 736 aa18.11■□□□□ 0.49
CSNK1D-226ENST00000585026 PHLDB1Q86UU1 1377 aa18.11■□□□□ 0.49
CSNK1D-226ENST00000585026 ARID3CA6NKF2 412 aa18.09■□□□□ 0.49
CSNK1D-226ENST00000585026 CSRNP3Q8WYN3 585 aa18.08■□□□□ 0.48
CSNK1D-226ENST00000585026 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.07■□□□□ 0.48
CSNK1D-226ENST00000585026 HNRNPUL2Q1KMD3 747 aaKnown RBP18.07■□□□□ 0.48
CSNK1D-226ENST00000585026 ARAP3Q8WWN8 1544 aa18.07■□□□□ 0.48
CSNK1D-226ENST00000585026 ATP10BO94823 1461 aa18.07■□□□□ 0.48
CSNK1D-226ENST00000585026 HECW2Q9P2P5 1572 aa18.06■□□□□ 0.48
CSNK1D-226ENST00000585026 NEO1Q92859 1461 aa17.98■□□□□ 0.47
CSNK1D-226ENST00000585026 EEA1Q15075 1411 aa17.98■□□□□ 0.47
CSNK1D-226ENST00000585026 PLEKHD1A6NEE1 506 aa17.97■□□□□ 0.47
CSNK1D-226ENST00000585026 RAPGEF3O95398 923 aa17.97■□□□□ 0.47
CSNK1D-226ENST00000585026 ABCA9Q8IUA7 1624 aa17.97■□□□□ 0.47
CSNK1D-226ENST00000585026 SAMD9Q5K651 1589 aa17.95■□□□□ 0.46
CSNK1D-226ENST00000585026 ARID4BQ4LE39 1312 aaPredicted RBP17.95■□□□□ 0.46
CSNK1D-226ENST00000585026 KIF21BO75037 1637 aa17.94■□□□□ 0.46
CSNK1D-226ENST00000585026 RAPGEF6Q8TEU7 1601 aa17.94■□□□□ 0.46
CSNK1D-226ENST00000585026 RANGAP1P46060 587 aaPredicted RBP17.94■□□□□ 0.46
CSNK1D-226ENST00000585026 PTPRMP28827 1452 aa17.89■□□□□ 0.45
CSNK1D-226ENST00000585026 NUP153P49790 1475 aaKnown RBP17.89■□□□□ 0.45
CSNK1D-226ENST00000585026 FHOD3Q2V2M9 1422 aa17.88■□□□□ 0.45
CSNK1D-226ENST00000585026 DENND4BO75064 1496 aaPredicted RBP17.87■□□□□ 0.45
CSNK1D-226ENST00000585026 FBXO41Q8TF61 875 aa17.84■□□□□ 0.45
CSNK1D-226ENST00000585026 ADAMTSL3P82987 1691 aa17.83■□□□□ 0.45
CSNK1D-226ENST00000585026 AKNAQ7Z591 1439 aa17.83■□□□□ 0.45
CSNK1D-226ENST00000585026 FANCAO15360 1455 aa17.82■□□□□ 0.44
CSNK1D-226ENST00000585026 POGZQ7Z3K3 1410 aa17.81■□□□□ 0.44
CSNK1D-226ENST00000585026 EFCAB5A4FU69 1503 aa17.81■□□□□ 0.44
CSNK1D-226ENST00000585026 FRMPD1Q5SYB0 1578 aa17.79■□□□□ 0.44
CSNK1D-226ENST00000585026 CFAP74Q9C0B2 1584 aa17.79■□□□□ 0.44
CSNK1D-226ENST00000585026 BCORL1Q5H9F3 1711 aa17.78■□□□□ 0.44
CSNK1D-226ENST00000585026 CDK11AQ9UQ88 783 aaPredicted RBP17.77■□□□□ 0.44
CSNK1D-226ENST00000585026 ARHGEF40Q8TER5 1519 aa17.77■□□□□ 0.43
CSNK1D-226ENST00000585026 MAGI2Q86UL8 1455 aa17.76■□□□□ 0.43
CSNK1D-226ENST00000585026 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.76■□□□□ 0.43
CSNK1D-226ENST00000585026 UBTFP17480 764 aaKnown RBP17.75■□□□□ 0.43
CSNK1D-226ENST00000585026 ATP1B4Q9UN42 357 aaPredicted RBP17.75■□□□□ 0.43
CSNK1D-226ENST00000585026 PCF11O94913 1555 aaKnown RBP17.74■□□□□ 0.43
CSNK1D-226ENST00000585026 MADDQ8WXG6 1647 aa17.74■□□□□ 0.43
CSNK1D-226ENST00000585026 EFCAB2Q5VUJ9 269 aa17.73■□□□□ 0.43
CSNK1D-226ENST00000585026 PLCH2O75038 1416 aa17.72■□□□□ 0.43
CSNK1D-226ENST00000585026 ZMYM4Q5VZL5 1548 aa17.72■□□□□ 0.43
CSNK1D-226ENST00000585026 ZFYVE16Q7Z3T8 1539 aa17.72■□□□□ 0.43
CSNK1D-226ENST00000585026 FMN1Q68DA7 1419 aa17.72■□□□□ 0.43
CSNK1D-226ENST00000585026 LMTK3Q96Q04 1460 aa17.71■□□□□ 0.43
CSNK1D-226ENST00000585026 RICTORQ6R327 1708 aa17.71■□□□□ 0.43
CSNK1D-226ENST00000585026 SCAPERQ9BY12 1400 aa17.71■□□□□ 0.43
CSNK1D-226ENST00000585026 PLPPR3Q6T4P5 718 aa17.7■□□□□ 0.42
CSNK1D-226ENST00000585026 MLECQ14165 292 aa17.69■□□□□ 0.42
CSNK1D-226ENST00000585026 TTC37Q6PGP7 1564 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms