RNA–Protein interactions for RNA: ENST00000581733.1

TVP23B-209, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5 BASIC

Gene TVP23B, Length 1,258 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-209ENST00000581733 ATMINO43313 823 aaPredicted RBP14.65□□□□□ -0.06
TVP23B-209ENST00000581733 POTEGQ6S5H5 508 aa14.65□□□□□ -0.06
TVP23B-209ENST00000581733 TSPYL2Q9H2G4 693 aaPredicted RBP14.65□□□□□ -0.06
TVP23B-209ENST00000581733 SLC39A7Q92504 469 aa14.63□□□□□ -0.07
TVP23B-209ENST00000581733 C7P10643 843 aa14.61□□□□□ -0.07
TVP23B-209ENST00000581733 POTEJP0CG39 1038 aa14.59□□□□□ -0.07
TVP23B-209ENST00000581733 NISCHQ9Y2I1 1504 aa14.55□□□□□ -0.08
TVP23B-209ENST00000581733 ATN1P54259 1190 aaPredicted RBP14.53□□□□□ -0.08
TVP23B-209ENST00000581733 CCDC61Q9Y6R9 512 aa14.53□□□□□ -0.08
TVP23B-209ENST00000581733 MAMSTRQ6ZN01 415 aa14.51□□□□□ -0.09
TVP23B-209ENST00000581733 KIF12Q96FN5 646 aa14.48□□□□□ -0.09
TVP23B-209ENST00000581733 PROM2Q8N271 834 aa14.47□□□□□ -0.09
TVP23B-209ENST00000581733 SCUBE2Q9NQ36 999 aa14.45□□□□□ -0.1
TVP23B-209ENST00000581733 FAM163AQ96GL9 167 aaPredicted RBP14.44□□□□□ -0.1
TVP23B-209ENST00000581733 TRPC6Q9Y210 931 aa14.44□□□□□ -0.1
TVP23B-209ENST00000581733 BMP2KQ9NSY1 1161 aaPredicted RBP14.43□□□□□ -0.1
TVP23B-209ENST00000581733 MAP3K13O43283 966 aa14.4□□□□□ -0.1
TVP23B-209ENST00000581733 LCE2DQ5TA82 110 aaPredicted RBP14.39□□□□□ -0.11
TVP23B-209ENST00000581733 PCDH10Q9P2E7 1040 aa14.39□□□□□ -0.11
TVP23B-209ENST00000581733 POTEFA5A3E0 1075 aa14.38□□□□□ -0.11
TVP23B-209ENST00000581733 PLEKHG5O94827 1062 aa14.38□□□□□ -0.11
TVP23B-209ENST00000581733 MIER1Q8N108 512 aa14.38□□□□□ -0.11
TVP23B-209ENST00000581733 RASEFQ8IZ41 740 aa14.37□□□□□ -0.11
TVP23B-209ENST00000581733 TIE1P35590 1138 aa14.33□□□□□ -0.12
TVP23B-209ENST00000581733 SEC24BO95487 1268 aa14.29□□□□□ -0.12
TVP23B-209ENST00000581733 TTLL13PA6NNM8 815 aa14.28□□□□□ -0.12
TVP23B-209ENST00000581733 COLQQ9Y215 455 aaPredicted RBP14.28□□□□□ -0.12
TVP23B-209ENST00000581733 PLCD3Q8N3E9 789 aa14.23□□□□□ -0.13
TVP23B-209ENST00000581733 PCDHB13Q9Y5F0 798 aa14.21□□□□□ -0.13
TVP23B-209ENST00000581733 TRIM35Q9UPQ4 493 aa14.2□□□□□ -0.14
TVP23B-209ENST00000581733 IER5LQ5T953 404 aa14.13□□□□□ -0.15
TVP23B-209ENST00000581733 SGIP1Q9BQI5 828 aa14.12□□□□□ -0.15
TVP23B-209ENST00000581733 IFNL1Q8IU54 200 aa14.11□□□□□ -0.15
TVP23B-209ENST00000581733 CDAN1Q8IWY9 1227 aa14.1□□□□□ -0.15
TVP23B-209ENST00000581733 NUBP1P53384 320 aa14.09□□□□□ -0.15
TVP23B-209ENST00000581733 SLAIN1Q8ND83 568 aa14.09□□□□□ -0.15
TVP23B-209ENST00000581733 TMEM106CQ9BVX2 250 aa14.07□□□□□ -0.16
TVP23B-209ENST00000581733 ZBTB47Q9UFB7 747 aaPredicted RBP14.07□□□□□ -0.16
TVP23B-209ENST00000581733 FAM212AQ96EL1 285 aa14.03□□□□□ -0.16
TVP23B-209ENST00000581733 ST18O60284 1047 aa14.02□□□□□ -0.17
TVP23B-209ENST00000581733 PLCG2P16885 1265 aa14.02□□□□□ -0.17
TVP23B-209ENST00000581733 IRX5P78411 483 aaPredicted RBP13.93□□□□□ -0.18
TVP23B-209ENST00000581733 PYGBP11216 843 aa13.9□□□□□ -0.18
TVP23B-209ENST00000581733 DCAF8Q5TAQ9 597 aa13.89□□□□□ -0.19
TVP23B-209ENST00000581733 OCEL1Q9H607 264 aa13.87□□□□□ -0.19
TVP23B-209ENST00000581733 FKBP8Q14318 412 aa13.85□□□□□ -0.19
TVP23B-209ENST00000581733 PCDHB8Q9UN66 801 aa13.85□□□□□ -0.19
TVP23B-209ENST00000581733 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.81□□□□□ -0.2
TVP23B-209ENST00000581733 MARVELD3Q96A59 401 aa13.79□□□□□ -0.2
TVP23B-209ENST00000581733 SNPHO15079 494 aa13.78□□□□□ -0.2
TVP23B-209ENST00000581733 TMEM121BQ9BXQ6 578 aaPredicted RBP13.78□□□□□ -0.2
TVP23B-209ENST00000581733 MMRN1Q13201 1228 aa13.75□□□□□ -0.21
TVP23B-209ENST00000581733 SPNS2Q8IVW8 549 aa13.75□□□□□ -0.21
TVP23B-209ENST00000581733 GOLGA2Q08379 1002 aa13.68□□□□□ -0.22
TVP23B-209ENST00000581733 C3orf67Q6ZVT6 689 aa13.68□□□□□ -0.22
TVP23B-209ENST00000581733 PDCD7Q8N8D1 485 aaKnown RBP13.68□□□□□ -0.22
TVP23B-209ENST00000581733 MKRN3Q13064 507 aaKnown RBP13.65□□□□□ -0.22
TVP23B-209ENST00000581733 EMP3P54852 163 aa13.63□□□□□ -0.23
TVP23B-209ENST00000581733 KLHL34Q8N239 644 aa13.63□□□□□ -0.23
TVP23B-209ENST00000581733 FBXO3Q9UK99 471 aa13.63□□□□□ -0.23
TVP23B-209ENST00000581733 ZNF467Q7Z7K2 595 aaPredicted RBP13.62□□□□□ -0.23
TVP23B-209ENST00000581733 L3MBTL3Q96JM7 780 aaPredicted RBP13.61□□□□□ -0.23
TVP23B-209ENST00000581733 GSE1Q14687 1217 aa13.6□□□□□ -0.23
TVP23B-209ENST00000581733 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.59□□□□□ -0.23
TVP23B-209ENST00000581733 PSEN1P49768 467 aa13.55□□□□□ -0.24
TVP23B-209ENST00000581733 FAM205CA6NFA0 338 aa13.54□□□□□ -0.24
TVP23B-209ENST00000581733 HS3ST6Q96QI5 342 aa13.53□□□□□ -0.24
TVP23B-209ENST00000581733 POTEB3A0JP26 581 aa13.52□□□□□ -0.25
TVP23B-209ENST00000581733 POTEBQ6S5H4 581 aa13.52□□□□□ -0.25
TVP23B-209ENST00000581733 VASPP50552 380 aaPredicted RBP13.51□□□□□ -0.25
TVP23B-209ENST00000581733 KRTAP3-3Q9BYR6 98 aa13.49□□□□□ -0.25
TVP23B-209ENST00000581733 KRTAP3-2Q9BYR7 98 aa13.49□□□□□ -0.25
TVP23B-209ENST00000581733 CHRM1P11229 460 aaPredicted RBP13.48□□□□□ -0.25
TVP23B-209ENST00000581733 DPY19L2Q6NUT2 758 aa13.48□□□□□ -0.25
TVP23B-209ENST00000581733 PDAP1Q13442 181 aaKnown RBP13.43□□□□□ -0.26
TVP23B-209ENST00000581733 CABP2Q9NPB3 220 aa13.42□□□□□ -0.26
TVP23B-209ENST00000581733 G3V3G9 751 aa13.41□□□□□ -0.26
TVP23B-209ENST00000581733 ILDR1Q86SU0 546 aaPredicted RBP13.39□□□□□ -0.27
TVP23B-209ENST00000581733 BOLA1Q9Y3E2 137 aa13.38□□□□□ -0.27
TVP23B-209ENST00000581733 HOXB3P14651 431 aaPredicted RBP13.36□□□□□ -0.27
TVP23B-209ENST00000581733 CIZ1Q9ULV3 898 aaPredicted RBP13.35□□□□□ -0.27
TVP23B-209ENST00000581733 ZNF710Q8N1W2 664 aa13.34□□□□□ -0.27
TVP23B-209ENST00000581733 ERBB3P21860 1342 aa13.29□□□□□ -0.28
TVP23B-209ENST00000581733 HOXB1P14653 301 aaPredicted RBP13.28□□□□□ -0.28
TVP23B-209ENST00000581733 SPOCK2Q92563 424 aa13.28□□□□□ -0.28
TVP23B-209ENST00000581733 DOK7Q18PE1 504 aa13.26□□□□□ -0.29
TVP23B-209ENST00000581733 IFNLR1Q8IU57 520 aaPredicted RBP13.23□□□□□ -0.29
TVP23B-209ENST00000581733 EFCAB3Q8N7B9 438 aa13.2□□□□□ -0.3
TVP23B-209ENST00000581733 VARS2Q5ST30 1063 aaKnown RBP13.19□□□□□ -0.3
TVP23B-209ENST00000581733 RIMBP2O15034 1052 aa13.18□□□□□ -0.3
TVP23B-209ENST00000581733 RNF166Q96A37 237 aaPredicted RBP13.18□□□□□ -0.3
TVP23B-209ENST00000581733 TMEM92Q6UXU6 159 aa13.11□□□□□ -0.31
TVP23B-209ENST00000581733 MICALL2Q8IY33 904 aa13.11□□□□□ -0.31
TVP23B-209ENST00000581733 MYT1LQ9UL68 1186 aa13.11□□□□□ -0.31
TVP23B-209ENST00000581733 ZNF687Q8N1G0 1237 aa13.05□□□□□ -0.32
TVP23B-209ENST00000581733 ZSWIM6Q9HCJ5 1215 aa13.04□□□□□ -0.32
TVP23B-209ENST00000581733 GPR153Q6NV75 609 aa13.03□□□□□ -0.32
TVP23B-209ENST00000581733 TRIM41Q8WV44 630 aa13.02□□□□□ -0.33
TVP23B-209ENST00000581733 MS4A4AQ96JQ5 239 aa12.99□□□□□ -0.33
TVP23B-209ENST00000581733 SOX12O15370 315 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms