RNA–Protein interactions for RNA: ENST00000581339.1

RIOK3-206, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 888 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-206ENST00000581339 ECM2O94769 699 aaPredicted RBP14.97□□□□□ -0.01
RIOK3-206ENST00000581339 CD44P16070 742 aaKnown RBP14.95□□□□□ -0.02
RIOK3-206ENST00000581339 POTEHQ6S545 545 aa14.93□□□□□ -0.02
RIOK3-206ENST00000581339 C19orf67A6NJJ6 358 aa14.91□□□□□ -0.02
RIOK3-206ENST00000581339 ZRANB1Q9UGI0 708 aa14.87□□□□□ -0.03
RIOK3-206ENST00000581339 CCDC61Q9Y6R9 512 aa14.87□□□□□ -0.03
RIOK3-206ENST00000581339 HAX1O00165 279 aa14.86□□□□□ -0.03
RIOK3-206ENST00000581339 PYGBP11216 843 aa14.84□□□□□ -0.03
RIOK3-206ENST00000581339 CHRM1P11229 460 aaPredicted RBP14.84□□□□□ -0.03
RIOK3-206ENST00000581339 RGL2O15211 777 aa14.79□□□□□ -0.04
RIOK3-206ENST00000581339 ZNF579Q8NAF0 562 aaKnown RBP14.77□□□□□ -0.05
RIOK3-206ENST00000581339 DCAF8L2P0C7V8 631 aa14.76□□□□□ -0.05
RIOK3-206ENST00000581339 PHF12Q96QT6 1004 aa14.74□□□□□ -0.05
RIOK3-206ENST00000581339 RNF25Q96BH1 459 aaPredicted RBP14.73□□□□□ -0.05
RIOK3-206ENST00000581339 KIF12Q96FN5 646 aa14.72□□□□□ -0.05
RIOK3-206ENST00000581339 RIOK3O14730 519 aaKnown RBP14.71□□□□□ -0.05
RIOK3-206ENST00000581339 EVX2Q03828 476 aa14.7□□□□□ -0.06
RIOK3-206ENST00000581339 MAP3K13O43283 966 aa14.68□□□□□ -0.06
RIOK3-206ENST00000581339 ZNF467Q7Z7K2 595 aaPredicted RBP14.68□□□□□ -0.06
RIOK3-206ENST00000581339 PCDHB13Q9Y5F0 798 aa14.68□□□□□ -0.06
RIOK3-206ENST00000581339 SGIP1Q9BQI5 828 aa14.67□□□□□ -0.06
RIOK3-206ENST00000581339 TAOK2Q9UL54 1235 aa14.66□□□□□ -0.06
RIOK3-206ENST00000581339 VGFO15240 615 aaPredicted RBP14.62□□□□□ -0.07
RIOK3-206ENST00000581339 PCDHB8Q9UN66 801 aa14.62□□□□□ -0.07
RIOK3-206ENST00000581339 IFNL1Q8IU54 200 aa14.61□□□□□ -0.07
RIOK3-206ENST00000581339 CLCN6P51797 869 aa14.58□□□□□ -0.08
RIOK3-206ENST00000581339 MS4A3Q96HJ5 214 aa14.57□□□□□ -0.08
RIOK3-206ENST00000581339 PDAP1Q13442 181 aaKnown RBP14.56□□□□□ -0.08
RIOK3-206ENST00000581339 ABCC9O60706 1549 aa14.55□□□□□ -0.08
RIOK3-206ENST00000581339 CHGAP10645 457 aaKnown RBP14.54□□□□□ -0.08
RIOK3-206ENST00000581339 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.52□□□□□ -0.09
RIOK3-206ENST00000581339 ZFP91Q96JP5 570 aaPredicted RBP14.52□□□□□ -0.09
RIOK3-206ENST00000581339 PSEN1P49768 467 aa14.51□□□□□ -0.09
RIOK3-206ENST00000581339 STK25O00506 426 aa14.5□□□□□ -0.09
RIOK3-206ENST00000581339 HS6ST3Q8IZP7 471 aa14.5□□□□□ -0.09
RIOK3-206ENST00000581339 GALR2O43603 387 aaPredicted RBP14.49□□□□□ -0.09
RIOK3-206ENST00000581339 BCL11BQ9C0K0 894 aaPredicted RBP14.46□□□□□ -0.09
RIOK3-206ENST00000581339 GABBR2O75899 941 aa14.45□□□□□ -0.1
RIOK3-206ENST00000581339 SP7Q8TDD2 431 aaPredicted RBP14.44□□□□□ -0.1
RIOK3-206ENST00000581339 STK24Q9Y6E0 443 aa14.44□□□□□ -0.1
RIOK3-206ENST00000581339 TRPC6Q9Y210 931 aa14.43□□□□□ -0.1
RIOK3-206ENST00000581339 BBXQ8WY36 941 aaPredicted RBP14.41□□□□□ -0.1
RIOK3-206ENST00000581339 TIE1P35590 1138 aa14.4□□□□□ -0.1
RIOK3-206ENST00000581339 TMEM106CQ9BVX2 250 aa14.4□□□□□ -0.1
RIOK3-206ENST00000581339 CCDC180Q9P1Z9 1646 aa14.4□□□□□ -0.1
RIOK3-206ENST00000581339 DNAJC5Q9H3Z4 198 aa14.36□□□□□ -0.11
RIOK3-206ENST00000581339 BMP2KQ9NSY1 1161 aaPredicted RBP14.36□□□□□ -0.11
RIOK3-206ENST00000581339 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.35□□□□□ -0.11
RIOK3-206ENST00000581339 TTLL13PA6NNM8 815 aa14.34□□□□□ -0.11
RIOK3-206ENST00000581339 CABP2Q9NPB3 220 aa14.33□□□□□ -0.12
RIOK3-206ENST00000581339 GOLGA2Q08379 1002 aa14.29□□□□□ -0.12
RIOK3-206ENST00000581339 DCBLD2Q96PD2 775 aa14.29□□□□□ -0.12
RIOK3-206ENST00000581339 NKX1-1Q15270 411 aaPredicted RBP14.27□□□□□ -0.13
RIOK3-206ENST00000581339 ATMINO43313 823 aaPredicted RBP14.26□□□□□ -0.13
RIOK3-206ENST00000581339 ASTLQ6HA08 431 aaPredicted RBP14.26□□□□□ -0.13
RIOK3-206ENST00000581339 EFCAB3Q8N7B9 438 aa14.25□□□□□ -0.13
RIOK3-206ENST00000581339 TRIM35Q9UPQ4 493 aa14.25□□□□□ -0.13
RIOK3-206ENST00000581339 ATN1P54259 1190 aaPredicted RBP14.23□□□□□ -0.13
RIOK3-206ENST00000581339 PLCB2Q00722 1185 aa14.22□□□□□ -0.13
RIOK3-206ENST00000581339 MKRN3Q13064 507 aaKnown RBP14.22□□□□□ -0.13
RIOK3-206ENST00000581339 PAXIP1Q6ZW49 1069 aaPredicted RBP14.21□□□□□ -0.13
RIOK3-206ENST00000581339 SPRYD3Q8NCJ5 442 aa14.21□□□□□ -0.13
RIOK3-206ENST00000581339 SOX12O15370 315 aa14.2□□□□□ -0.14
RIOK3-206ENST00000581339 RYDENQ9NUL5 291 aaKnown RBP14.19□□□□□ -0.14
RIOK3-206ENST00000581339 CFAP44Q96MT7 982 aa14.18□□□□□ -0.14
RIOK3-206ENST00000581339 MFRPQ9BY79 579 aa14.16□□□□□ -0.14
RIOK3-206ENST00000581339 GTPBP6O43824 516 aaPredicted RBP14.15□□□□□ -0.14
RIOK3-206ENST00000581339 NLRP6P59044 892 aa14.15□□□□□ -0.14
RIOK3-206ENST00000581339 POTEIP0CG38 1075 aa14.13□□□□□ -0.15
RIOK3-206ENST00000581339 IER5LQ5T953 404 aa14.13□□□□□ -0.15
RIOK3-206ENST00000581339 PHF8Q9UPP1 1060 aa14.13□□□□□ -0.15
RIOK3-206ENST00000581339 PELP1Q8IZL8 1130 aaKnown RBP14.11□□□□□ -0.15
RIOK3-206ENST00000581339 FBXO22Q8NEZ5 403 aa14.11□□□□□ -0.15
RIOK3-206ENST00000581339 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.1□□□□□ -0.154e-7■■■■□ 22.6
RIOK3-206ENST00000581339 SLC39A7Q92504 469 aa14.08□□□□□ -0.16
RIOK3-206ENST00000581339 C7P10643 843 aa14.05□□□□□ -0.16
RIOK3-206ENST00000581339 ILDR1Q86SU0 546 aaPredicted RBP14.05□□□□□ -0.16
RIOK3-206ENST00000581339 IRX5P78411 483 aaPredicted RBP14.04□□□□□ -0.16
RIOK3-206ENST00000581339 MS4A4AQ96JQ5 239 aa14.04□□□□□ -0.16
RIOK3-206ENST00000581339 OCEL1Q9H607 264 aa14.03□□□□□ -0.16
RIOK3-206ENST00000581339 PLCG2P16885 1265 aa14.02□□□□□ -0.17
RIOK3-206ENST00000581339 SEC24BO95487 1268 aa14.01□□□□□ -0.17
RIOK3-206ENST00000581339 HAP1P54257 671 aaPredicted RBP14.01□□□□□ -0.17
RIOK3-206ENST00000581339 METRNQ9UJH8 293 aa14.01□□□□□ -0.17
RIOK3-206ENST00000581339 SLC24A1O60721 1099 aa14□□□□□ -0.17
RIOK3-206ENST00000581339 PDCD7Q8N8D1 485 aaKnown RBP13.99□□□□□ -0.17
RIOK3-206ENST00000581339 PPP1R37O75864 691 aa13.96□□□□□ -0.17
RIOK3-206ENST00000581339 COLQQ9Y215 455 aaPredicted RBP13.96□□□□□ -0.17
RIOK3-206ENST00000581339 DPY19L2Q6NUT2 758 aa13.93□□□□□ -0.18
RIOK3-206ENST00000581339 TSHZ2Q9NRE2 1034 aa13.93□□□□□ -0.18
RIOK3-206ENST00000581339 POTEFA5A3E0 1075 aa13.91□□□□□ -0.18
RIOK3-206ENST00000581339 G3V3G9 751 aa13.86□□□□□ -0.19
RIOK3-206ENST00000581339 L3MBTL3Q96JM7 780 aaPredicted RBP13.86□□□□□ -0.19
RIOK3-206ENST00000581339 BOLA1Q9Y3E2 137 aa13.85□□□□□ -0.19
RIOK3-206ENST00000581339 MICALL2Q8IY33 904 aa13.83□□□□□ -0.2
RIOK3-206ENST00000581339 VSIG10Q8N0Z9 540 aa13.79□□□□□ -0.2
RIOK3-206ENST00000581339 TMEM121BQ9BXQ6 578 aaPredicted RBP13.79□□□□□ -0.2
RIOK3-206ENST00000581339 CADPS2Q86UW7 1296 aa13.78□□□□□ -0.2
RIOK3-206ENST00000581339 RB1CC1Q8TDY2 1594 aa13.75□□□□□ -0.21
RIOK3-206ENST00000581339 C3orf67Q6ZVT6 689 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms