RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 ERCC6Q03468 1493 aa20.42■□□□□ 0.86
ITGB4-206ENST00000579662 PLPPR3Q6T4P5 718 aa20.4■□□□□ 0.86
ITGB4-206ENST00000579662 CECR2Q9BXF3 1484 aa20.4■□□□□ 0.86
ITGB4-206ENST00000579662 KCNH8Q96L42 1107 aa20.39■□□□□ 0.86
ITGB4-206ENST00000579662 MRS2Q9HD23 443 aa20.39■□□□□ 0.85
ITGB4-206ENST00000579662 CFDP1Q9UEE9 299 aaPredicted RBP20.38■□□□□ 0.85
ITGB4-206ENST00000579662 UPF2Q9HAU5 1272 aaKnown RBP20.37■□□□□ 0.85
ITGB4-206ENST00000579662 FHAD1B1AJZ9 1412 aa20.35■□□□□ 0.85
ITGB4-206ENST00000579662 NPM2Q86SE8 214 aaKnown RBP20.32■□□□□ 0.84
ITGB4-206ENST00000579662 SMARCA2P51531 1590 aa20.3■□□□□ 0.84
ITGB4-206ENST00000579662 SALL2Q9Y467 1007 aaPredicted RBP20.29■□□□□ 0.84
ITGB4-206ENST00000579662 PPP1R15AO75807 674 aaPredicted RBP20.28■□□□□ 0.84
ITGB4-206ENST00000579662 CDCA8Q53HL2 280 aa20.27■□□□□ 0.84
ITGB4-206ENST00000579662 CUX2O14529 1486 aa20.27■□□□□ 0.83
ITGB4-206ENST00000579662 CARMIL1Q5VZK9 1371 aa20.27■□□□□ 0.83
ITGB4-206ENST00000579662 CCDC136Q96JN2 1154 aa20.27■□□□□ 0.83
ITGB4-206ENST00000579662 HSP90AA1P07900 732 aaKnown RBP20.24■□□□□ 0.83
ITGB4-206ENST00000579662 MIER1Q8N108 512 aa20.21■□□□□ 0.83
ITGB4-206ENST00000579662 CCNB3Q8WWL7 1395 aa20.21■□□□□ 0.83
ITGB4-206ENST00000579662 MROH2BQ7Z745 1585 aa20.2■□□□□ 0.82
ITGB4-206ENST00000579662 CCDC88BA6NC98 1476 aa20.2■□□□□ 0.82
ITGB4-206ENST00000579662 EIF4G1Q04637 1599 aaKnown RBP20.18■□□□□ 0.82
ITGB4-206ENST00000579662 HIRIP3Q9BW71 556 aaPredicted RBP20.18■□□□□ 0.82
ITGB4-206ENST00000579662 RGL3Q3MIN7 710 aa20.17■□□□□ 0.82
ITGB4-206ENST00000579662 SOGA1O94964 1423 aa20.15■□□□□ 0.82
ITGB4-206ENST00000579662 ANP32BQ92688 251 aaKnown RBP20.15■□□□□ 0.82
ITGB4-206ENST00000579662 CFAP53Q96M91 514 aa20.14■□□□□ 0.82
ITGB4-206ENST00000579662 PDS5BQ9NTI5 1447 aa20.14■□□□□ 0.81
ITGB4-206ENST00000579662 MYH16Q9H6N6 1097 aa20.13■□□□□ 0.81
ITGB4-206ENST00000579662 CARD11Q9BXL7 1154 aa20.13■□□□□ 0.81
ITGB4-206ENST00000579662 KNSTRNQ9Y448 316 aa20.11■□□□□ 0.81
ITGB4-206ENST00000579662 TOP2AP11388 1531 aaKnown RBP20.09■□□□□ 0.81
ITGB4-206ENST00000579662 ARID4BQ4LE39 1312 aaPredicted RBP20.09■□□□□ 0.81
ITGB4-206ENST00000579662 VPS8Q8N3P4 1428 aa20.08■□□□□ 0.8
ITGB4-206ENST00000579662 SCAF1Q9H7N4 1312 aaKnown RBP20.07■□□□□ 0.8
ITGB4-206ENST00000579662 TIMELESSQ9UNS1 1208 aa20.06■□□□□ 0.8
ITGB4-206ENST00000579662 KANK1Q14678 1352 aa20.05■□□□□ 0.8
ITGB4-206ENST00000579662 ARHGAP35Q9NRY4 1499 aa20.05■□□□□ 0.8
ITGB4-206ENST00000579662 CARMIL2Q6F5E8 1435 aa20.04■□□□□ 0.8
ITGB4-206ENST00000579662 C14orf37Q86TY3 774 aa20.03■□□□□ 0.8
ITGB4-206ENST00000579662 ABCC8Q09428 1581 aa20.02■□□□□ 0.8
ITGB4-206ENST00000579662 FMN1Q68DA7 1419 aa19.98■□□□□ 0.79
ITGB4-206ENST00000579662 SIN3AQ96ST3 1273 aa19.97■□□□□ 0.79
ITGB4-206ENST00000579662 ZBTB7CA1YPR0 619 aa19.97■□□□□ 0.79
ITGB4-206ENST00000579662 SETD5Q9C0A6 1442 aa19.97■□□□□ 0.79
ITGB4-206ENST00000579662 POGKQ9P215 609 aa19.95■□□□□ 0.78
ITGB4-206ENST00000579662 SENP3Q9H4L4 574 aaPredicted RBP19.94■□□□□ 0.78
ITGB4-206ENST00000579662 NUDCQ9Y266 331 aa19.94■□□□□ 0.78
ITGB4-206ENST00000579662 IRX6P78412 446 aaPredicted RBP19.94■□□□□ 0.78
ITGB4-206ENST00000579662 WIZO95785 1651 aa19.92■□□□□ 0.78
ITGB4-206ENST00000579662 MAPK8IP3Q9UPT6 1336 aa19.91■□□□□ 0.78
ITGB4-206ENST00000579662 TMF1P82094 1093 aa19.9■□□□□ 0.78
ITGB4-206ENST00000579662 DDRGK1Q96HY6 314 aa19.9■□□□□ 0.78
ITGB4-206ENST00000579662 CADPSQ9ULU8 1353 aa19.9■□□□□ 0.78
ITGB4-206ENST00000579662 HDGFP51858 240 aaKnown RBP19.89■□□□□ 0.77
ITGB4-206ENST00000579662 EIF5BO60841 1220 aaKnown RBP19.88■□□□□ 0.77
ITGB4-206ENST00000579662 BECN1Q14457 450 aa19.87■□□□□ 0.77
ITGB4-206ENST00000579662 DCAF11Q8TEB1 546 aa19.86■□□□□ 0.77
ITGB4-206ENST00000579662 HAP1P54257 671 aaPredicted RBP19.85■□□□□ 0.77
ITGB4-206ENST00000579662 TDRD9Q8NDG6 1382 aaKnown RBP19.85■□□□□ 0.77
ITGB4-206ENST00000579662 PNNQ9H307 717 aaKnown RBP19.85■□□□□ 0.77
ITGB4-206ENST00000579662 PPM1GO15355 546 aaPredicted RBP19.85■□□□□ 0.77
ITGB4-206ENST00000579662 RAPGEF2Q9Y4G8 1499 aa19.85■□□□□ 0.77
ITGB4-206ENST00000579662 A0A0G2JS52 829 aa19.84■□□□□ 0.77
ITGB4-206ENST00000579662 FTSJ3Q8IY81 847 aaKnown RBP19.83■□□□□ 0.76
ITGB4-206ENST00000579662 ATAD2BQ9ULI0 1458 aa19.82■□□□□ 0.76
ITGB4-206ENST00000579662 SMARCA4P51532 1647 aa19.82■□□□□ 0.76
ITGB4-206ENST00000579662 CHMP4BQ9H444 224 aaKnown RBP19.81■□□□□ 0.76
ITGB4-206ENST00000579662 PLEKHG5O94827 1062 aa19.79■□□□□ 0.76
ITGB4-206ENST00000579662 ANKRD30AQ9BXX3 1397 aa19.79■□□□□ 0.76
ITGB4-206ENST00000579662 MS4A1P11836 297 aa19.79■□□□□ 0.76
ITGB4-206ENST00000579662 KANK4Q5T7N3 995 aaPredicted RBP19.79■□□□□ 0.76
ITGB4-206ENST00000579662 CASC1Q6TDU7 716 aa19.77■□□□□ 0.76
ITGB4-206ENST00000579662 EFCAB2Q5VUJ9 269 aa19.77■□□□□ 0.76
ITGB4-206ENST00000579662 CC2D1BQ5T0F9 858 aaKnown RBP19.77■□□□□ 0.75
ITGB4-206ENST00000579662 PKD2Q13563 968 aa19.76■□□□□ 0.75
ITGB4-206ENST00000579662 SUPT16HQ9Y5B9 1047 aaKnown RBP19.76■□□□□ 0.75
ITGB4-206ENST00000579662 CCER2I3L3R5 266 aa19.75■□□□□ 0.75
ITGB4-206ENST00000579662 NBR1Q14596 966 aa19.74■□□□□ 0.75
ITGB4-206ENST00000579662 NEUROD2Q15784 382 aa19.73■□□□□ 0.75
ITGB4-206ENST00000579662 ANP32EQ9BTT0 268 aa19.73■□□□□ 0.75
ITGB4-206ENST00000579662 PPP4R2Q9NY27 417 aa19.73■□□□□ 0.75
ITGB4-206ENST00000579662 CCDC18Q5T9S5 1454 aa19.72■□□□□ 0.75
ITGB4-206ENST00000579662 RAB3GAP2Q9H2M9 1393 aa19.72■□□□□ 0.75
ITGB4-206ENST00000579662 LAS1LQ9Y4W2 734 aaKnown RBP19.71■□□□□ 0.75
ITGB4-206ENST00000579662 NCLP19338 710 aaKnown RBP19.7■□□□□ 0.74
ITGB4-206ENST00000579662 HSPA5P11021 654 aaKnown RBP19.7■□□□□ 0.74
ITGB4-206ENST00000579662 RSPH4AQ5TD94 716 aa19.7■□□□□ 0.74
ITGB4-206ENST00000579662 GOLGA6L22H0YM25 854 aa19.69■□□□□ 0.74
ITGB4-206ENST00000579662 U2SURPO15042 1029 aaKnown RBP19.69■□□□□ 0.74
ITGB4-206ENST00000579662 MPHOSPH9Q99550 1183 aa19.69■□□□□ 0.74
ITGB4-206ENST00000579662 NUP155O75694 1391 aa19.68■□□□□ 0.74
ITGB4-206ENST00000579662 TNNT2P45379 298 aaPredicted RBP19.68■□□□□ 0.74
ITGB4-206ENST00000579662 SRPK2P78362 688 aaKnown RBP19.68■□□□□ 0.74
ITGB4-206ENST00000579662 GGT6Q6P531 493 aa19.67■□□□□ 0.74
ITGB4-206ENST00000579662 FHOD3Q2V2M9 1422 aa19.67■□□□□ 0.74
ITGB4-206ENST00000579662 LMOD2Q6P5Q4 547 aa19.67■□□□□ 0.74
ITGB4-206ENST00000579662 MORC1Q86VD1 984 aa19.66■□□□□ 0.74
ITGB4-206ENST00000579662 KTN1Q86UP2 1357 aaKnown RBP19.66■□□□□ 0.74
ITGB4-206ENST00000579662 MLECQ14165 292 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms