RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 FANCIQ9NVI1 1328 aa5.88□□□□□ -1.47
CDH8-205ENST00000577730 CANXP27824 592 aaKnown RBP5.88□□□□□ -1.47
CDH8-205ENST00000577730 ARID4BQ4LE39 1312 aaPredicted RBP5.87□□□□□ -1.47
CDH8-205ENST00000577730 USP35Q9P2H5 1018 aa5.87□□□□□ -1.47
CDH8-205ENST00000577730 TIMELESSQ9UNS1 1208 aa5.86□□□□□ -1.47
CDH8-205ENST00000577730 DNTTIP2Q5QJE6 756 aaKnown RBP5.86□□□□□ -1.47
CDH8-205ENST00000577730 FAM9BQ8IZU0 186 aa5.85□□□□□ -1.47
CDH8-205ENST00000577730 IPO9Q96P70 1041 aaKnown RBP5.85□□□□□ -1.47
CDH8-205ENST00000577730 GOLGA6L22H0YM25 854 aa5.85□□□□□ -1.47
CDH8-205ENST00000577730 PTMAP06454 111 aaKnown RBP5.84□□□□□ -1.47
CDH8-205ENST00000577730 MSNP26038 577 aaKnown RBP5.84□□□□□ -1.47
CDH8-205ENST00000577730 TNNT3P45378 269 aaPredicted RBP5.84□□□□□ -1.47
CDH8-205ENST00000577730 PTMSP20962 102 aa5.82□□□□□ -1.48
CDH8-205ENST00000577730 PDE4CQ08493 712 aa5.82□□□□□ -1.48
CDH8-205ENST00000577730 GSE1Q14687 1217 aa5.82□□□□□ -1.48
CDH8-205ENST00000577730 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.81□□□□□ -1.48
CDH8-205ENST00000577730 MRS2Q9HD23 443 aa5.81□□□□□ -1.48
CDH8-205ENST00000577730 B4GALNT3Q6L9W6 998 aa5.8□□□□□ -1.48
CDH8-205ENST00000577730 GOLGA6L3A6NEY3 463 aa5.79□□□□□ -1.48
CDH8-205ENST00000577730 ARID3AQ99856 593 aa5.79□□□□□ -1.48
CDH8-205ENST00000577730 CHAF1AQ13111 956 aaPredicted RBP5.79□□□□□ -1.48
CDH8-205ENST00000577730 FAM50AQ14320 339 aaKnown RBP5.79□□□□□ -1.48
CDH8-205ENST00000577730 IL27Q8NEV9 243 aa5.79□□□□□ -1.48
CDH8-205ENST00000577730 MYO15BQ96JP2 1530 aa5.78□□□□□ -1.48
CDH8-205ENST00000577730 APPP05067 770 aa5.77□□□□□ -1.49
CDH8-205ENST00000577730 FAM43AQ8N2R8 423 aa5.76□□□□□ -1.49
CDH8-205ENST00000577730 TONSLQ96HA7 1378 aa5.76□□□□□ -1.49
CDH8-205ENST00000577730 CCER2I3L3R5 266 aa5.76□□□□□ -1.49
CDH8-205ENST00000577730 RRP9O43818 475 aaKnown RBP5.75□□□□□ -1.49
CDH8-205ENST00000577730 MAP7D2Q96T17 732 aa5.75□□□□□ -1.49
CDH8-205ENST00000577730 TCERG1O14776 1098 aaKnown RBP5.75□□□□□ -1.49
CDH8-205ENST00000577730 ZMYND15Q9H091 742 aa5.74□□□□□ -1.49
CDH8-205ENST00000577730 TPM2P07951 284 aa5.73□□□□□ -1.49
CDH8-205ENST00000577730 MTERF4Q7Z6M4 381 aaKnown RBP5.72□□□□□ -1.49
CDH8-205ENST00000577730 TMC1Q8TDI8 760 aa5.72□□□□□ -1.49
CDH8-205ENST00000577730 MYH16Q9H6N6 1097 aa5.72□□□□□ -1.49
CDH8-205ENST00000577730 BRPF3Q9ULD4 1205 aa5.72□□□□□ -1.49
CDH8-205ENST00000577730 KIAA2012Q0VF49 1180 aa5.71□□□□□ -1.49
CDH8-205ENST00000577730 ZNF771Q7L3S4 317 aaPredicted RBP5.71□□□□□ -1.49
CDH8-205ENST00000577730 FAM13BQ9NYF5 915 aa5.71□□□□□ -1.5
CDH8-205ENST00000577730 PLEKHG5O94827 1062 aa5.71□□□□□ -1.5
CDH8-205ENST00000577730 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.7□□□□□ -1.5
CDH8-205ENST00000577730 PDIA4P13667 645 aaKnown RBP5.7□□□□□ -1.5
CDH8-205ENST00000577730 GZF1Q9H116 711 aaPredicted RBP5.69□□□□□ -1.5
CDH8-205ENST00000577730 RGS3P49796 1198 aa5.69□□□□□ -1.5
CDH8-205ENST00000577730 SLC4A1APQ9BWU0 796 aaKnown RBP5.69□□□□□ -1.5
CDH8-205ENST00000577730 CALRP27797 417 aaKnown RBP5.69□□□□□ -1.5
CDH8-205ENST00000577730 GBP4Q96PP9 640 aa5.69□□□□□ -1.5
CDH8-205ENST00000577730 HSCBQ8IWL3 235 aa5.68□□□□□ -1.5
CDH8-205ENST00000577730 GOLGA6L6A8MZA4 724 aa5.68□□□□□ -1.5
CDH8-205ENST00000577730 PLCB2Q00722 1185 aa5.67□□□□□ -1.5
CDH8-205ENST00000577730 SLKQ9H2G2 1235 aaPredicted RBP5.67□□□□□ -1.5
CDH8-205ENST00000577730 HSP90AB1P08238 724 aaKnown RBP5.67□□□□□ -1.5
CDH8-205ENST00000577730 CSPP1Q1MSJ5 1256 aa5.67□□□□□ -1.5
CDH8-205ENST00000577730 FRAT1Q92837 279 aaPredicted RBP5.66□□□□□ -1.5
CDH8-205ENST00000577730 HIRIP3Q9BW71 556 aaPredicted RBP5.66□□□□□ -1.5
CDH8-205ENST00000577730 CCDC66A2RUB6 948 aa5.66□□□□□ -1.5
CDH8-205ENST00000577730 GOLGA6L1Q8N7Z2 621 aa5.66□□□□□ -1.5
CDH8-205ENST00000577730 NRDCO43847 1150 aa5.66□□□□□ -1.5
CDH8-205ENST00000577730 TAF3Q5VWG9 929 aa5.66□□□□□ -1.5
CDH8-205ENST00000577730 ZBTB7CA1YPR0 619 aa5.65□□□□□ -1.5
CDH8-205ENST00000577730 RBM10P98175 930 aaKnown RBP5.65□□□□□ -1.5
CDH8-205ENST00000577730 SETQ01105 290 aaPredicted RBP5.65□□□□□ -1.51
CDH8-205ENST00000577730 EEA1Q15075 1411 aa5.65□□□□□ -1.51
CDH8-205ENST00000577730 BBXQ8WY36 941 aaPredicted RBP5.64□□□□□ -1.51
CDH8-205ENST00000577730 DDX11L8A8MPP1 907 aa5.64□□□□□ -1.51
CDH8-205ENST00000577730 EIF4G2P78344 907 aaKnown RBP eCLIP5.64□□□□□ -1.51
CDH8-205ENST00000577730 PDE4AP27815 886 aa5.64□□□□□ -1.51
CDH8-205ENST00000577730 NFKBIBQ15653 356 aa5.64□□□□□ -1.51
CDH8-205ENST00000577730 TAF7LQ5H9L4 462 aa5.64□□□□□ -1.51
CDH8-205ENST00000577730 WDR43Q15061 677 aaKnown RBP eCLIP5.64□□□□□ -1.51
CDH8-205ENST00000577730 MSH5O43196 834 aa5.63□□□□□ -1.51
CDH8-205ENST00000577730 SPRYD3Q8NCJ5 442 aa5.63□□□□□ -1.51
CDH8-205ENST00000577730 MRE11P49959 708 aa5.62□□□□□ -1.51
CDH8-205ENST00000577730 SKOR2Q2VWA4 1001 aaPredicted RBP5.62□□□□□ -1.51
CDH8-205ENST00000577730 PDCL3Q9H2J4 239 aa5.62□□□□□ -1.51
CDH8-205ENST00000577730 ZRSR1Q15695 479 aaKnown RBP5.61□□□□□ -1.51
CDH8-205ENST00000577730 MS4A1P11836 297 aa5.61□□□□□ -1.51
CDH8-205ENST00000577730 NOM1Q5C9Z4 860 aaKnown RBP5.61□□□□□ -1.51
CDH8-205ENST00000577730 R3HCC1Q9Y3T6 440 aaKnown RBP5.61□□□□□ -1.51
CDH8-205ENST00000577730 PAK3O75914 559 aaPredicted RBP5.61□□□□□ -1.51
CDH8-205ENST00000577730 SLC4A3P48751 1232 aa5.61□□□□□ -1.51
CDH8-205ENST00000577730 DRC7Q8IY82 874 aa5.6□□□□□ -1.51
CDH8-205ENST00000577730 SYAP1Q96A49 352 aaPredicted RBP5.6□□□□□ -1.51
CDH8-205ENST00000577730 TEX35Q5T0J7 233 aa5.6□□□□□ -1.51
CDH8-205ENST00000577730 TSPYL1Q9H0U9 437 aa5.6□□□□□ -1.51
CDH8-205ENST00000577730 CASC1Q6TDU7 716 aa5.59□□□□□ -1.51
CDH8-205ENST00000577730 NUDCQ9Y266 331 aa5.59□□□□□ -1.51
CDH8-205ENST00000577730 CALD1Q05682 793 aaKnown RBP5.59□□□□□ -1.51
CDH8-205ENST00000577730 HAP1P54257 671 aaPredicted RBP5.59□□□□□ -1.52
CDH8-205ENST00000577730 PATL2C9JE40 543 aaKnown RBP5.58□□□□□ -1.52
CDH8-205ENST00000577730 HTATSF1O43719 755 aaKnown RBP5.58□□□□□ -1.52
CDH8-205ENST00000577730 GPS2Q13227 327 aa5.58□□□□□ -1.52
CDH8-205ENST00000577730 TPRNQ4KMQ1 711 aa5.58□□□□□ -1.52
CDH8-205ENST00000577730 KIAA1211Q6ZU35 1233 aa5.58□□□□□ -1.52
CDH8-205ENST00000577730 FAM161AQ3B820 660 aa5.58□□□□□ -1.52
CDH8-205ENST00000577730 PAXIP1Q6ZW49 1069 aaPredicted RBP5.57□□□□□ -1.52
CDH8-205ENST00000577730 AEBP1Q8IUX7 1158 aa5.57□□□□□ -1.52
CDH8-205ENST00000577730 CWC15Q9P013 229 aaKnown RBP5.57□□□□□ -1.52
CDH8-205ENST00000577730 BCL11BQ9C0K0 894 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms